BLASTX nr result

ID: Coptis21_contig00009130 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00009130
         (1049 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513438.1| conserved hypothetical protein [Ricinus comm...   162   1e-37
ref|XP_002299252.1| predicted protein [Populus trichocarpa] gi|1...   162   1e-37
ref|XP_002285600.1| PREDICTED: uncharacterized protein LOC100262...   160   5e-37
emb|CAN83221.1| hypothetical protein VITISV_031365 [Vitis vinifera]   156   9e-36
ref|XP_002278550.1| PREDICTED: uncharacterized protein LOC100248...   154   3e-35

>ref|XP_002513438.1| conserved hypothetical protein [Ricinus communis]
           gi|223547346|gb|EEF48841.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 137

 Score =  162 bits (410), Expect = 1e-37
 Identities = 87/137 (63%), Positives = 99/137 (72%), Gaps = 5/137 (3%)
 Frame = -2

Query: 691 MGRGRGKGKKLTAVTSHDDPGSGAEEVLPAYKRRGRPQKPLXXXXXXXXXXXXXKADVEN 512
           MGRGRGKGKKLTA  ++DDPGSG EE +PA KRRGRPQKPL             + D EN
Sbjct: 1   MGRGRGKGKKLTA-GNNDDPGSGEEEKIPAQKRRGRPQKPLKDDIDEEEVEKLEEEDGEN 59

Query: 511 AKSANLNKDTKVPATAENGKKRKRHTQVKENADSVKEENGVIT-----DSIKTNGFRQNG 347
            K+   +K+TK P   ENGKKRKR++Q KE +DS+KEENGV T     DS K+NGFR NG
Sbjct: 60  GKACLTSKETKSPIAVENGKKRKRYSQSKEKSDSMKEENGVSTRSSTDDSTKSNGFRHNG 119

Query: 346 SRRKSKPRRAAEAGVEC 296
           SRRKSKPRRAAEAGVEC
Sbjct: 120 SRRKSKPRRAAEAGVEC 136


>ref|XP_002299252.1| predicted protein [Populus trichocarpa] gi|118481982|gb|ABK92922.1|
           unknown [Populus trichocarpa]
           gi|222846510|gb|EEE84057.1| predicted protein [Populus
           trichocarpa]
          Length = 137

 Score =  162 bits (410), Expect = 1e-37
 Identities = 87/137 (63%), Positives = 98/137 (71%), Gaps = 5/137 (3%)
 Frame = -2

Query: 691 MGRGRGKGKKLTAVTSHDDPGSGAEEVLPAYKRRGRPQKPLXXXXXXXXXXXXXKADVEN 512
           MGRGRGKGKKLT V++HDD GSG EE +PA KRRGRPQKPL               +VEN
Sbjct: 1   MGRGRGKGKKLT-VSNHDDTGSGEEEKIPAQKRRGRPQKPLKDDIDEEEVEKIEDEEVEN 59

Query: 511 AKSANLNKDTKVPATAENGKKRKRHTQVKENADSVKEENGVIT-----DSIKTNGFRQNG 347
            K+   +K+TK P  AENGKKRKR++Q KE  DSVKEENGV T     DS K+NGFR N 
Sbjct: 60  GKTGITSKETKSPTAAENGKKRKRYSQAKEKPDSVKEENGVGTRSSTDDSTKSNGFRHNR 119

Query: 346 SRRKSKPRRAAEAGVEC 296
           SRRK+KPRRAAEAGVEC
Sbjct: 120 SRRKNKPRRAAEAGVEC 136


>ref|XP_002285600.1| PREDICTED: uncharacterized protein LOC100262168 [Vitis vinifera]
           gi|147828374|emb|CAN73155.1| hypothetical protein
           VITISV_040683 [Vitis vinifera]
          Length = 137

 Score =  160 bits (405), Expect = 5e-37
 Identities = 87/137 (63%), Positives = 97/137 (70%), Gaps = 5/137 (3%)
 Frame = -2

Query: 691 MGRGRGKGKKLTAVTSHDDPGSGAEEVLPAYKRRGRPQKPLXXXXXXXXXXXXXKADVEN 512
           MGRGRGKGKKLT VT+H+DPGSG EE +PA KRRGRPQKPL               D EN
Sbjct: 1   MGRGRGKGKKLT-VTNHEDPGSGEEEKIPAQKRRGRPQKPLKDEIDEEEVEKIEDEDSEN 59

Query: 511 AKSANLNKDTKVPATAENGKKRKRHTQVKENADSVKEENGVIT-----DSIKTNGFRQNG 347
           AK    +K+ K  A AENGKKRKR++Q KE  DSVKEENG+ T     DS K+NGFR N 
Sbjct: 60  AKIGISSKEMKSSAAAENGKKRKRYSQAKEKPDSVKEENGIGTRSSTDDSTKSNGFRNNR 119

Query: 346 SRRKSKPRRAAEAGVEC 296
           +RRKSKPRRAAEAGVEC
Sbjct: 120 NRRKSKPRRAAEAGVEC 136


>emb|CAN83221.1| hypothetical protein VITISV_031365 [Vitis vinifera]
          Length = 256

 Score =  156 bits (394), Expect = 9e-36
 Identities = 84/139 (60%), Positives = 96/139 (69%), Gaps = 6/139 (4%)
 Frame = -2

Query: 694 IMGRGRGKGKKLTAVTSHDDPGSGAEEVLPAYKRRGRPQKPL--XXXXXXXXXXXXXKAD 521
           IMGRGRGKGKK T + + DDPGSG +E +PAYKRRGRPQKP+               + D
Sbjct: 117 IMGRGRGKGKKQTVIATRDDPGSGEDEKIPAYKRRGRPQKPVKDDVEEEEEAEKVAIEED 176

Query: 520 VENAKSANLNKDTKVPATAENGKKRKRHTQVKENADSVKEENGVITDS----IKTNGFRQ 353
            EN K    +KD K  AT ENG+KRKR  Q KEN+DSVKEENG  T S    +K+ GFRQ
Sbjct: 177 GENEKGPITSKDAKNQATTENGRKRKRSLQTKENSDSVKEENGTETKSNNNDLKSVGFRQ 236

Query: 352 NGSRRKSKPRRAAEAGVEC 296
           NGSRRK+KPRRAAEAGVEC
Sbjct: 237 NGSRRKNKPRRAAEAGVEC 255


>ref|XP_002278550.1| PREDICTED: uncharacterized protein LOC100248625 [Vitis vinifera]
          Length = 139

 Score =  154 bits (390), Expect = 3e-35
 Identities = 83/138 (60%), Positives = 95/138 (68%), Gaps = 6/138 (4%)
 Frame = -2

Query: 691 MGRGRGKGKKLTAVTSHDDPGSGAEEVLPAYKRRGRPQKPL--XXXXXXXXXXXXXKADV 518
           MGRGRGKGKK T + + DDPGSG +E +PAYKRRGRPQKP+               + D 
Sbjct: 1   MGRGRGKGKKQTVIATRDDPGSGEDEKIPAYKRRGRPQKPVKDDVEEEEEAEKVAIEEDG 60

Query: 517 ENAKSANLNKDTKVPATAENGKKRKRHTQVKENADSVKEENGVITDS----IKTNGFRQN 350
           EN K    +KD K  AT ENG+KRKR  Q KEN+DSVKEENG  T S    +K+ GFRQN
Sbjct: 61  ENEKGPITSKDAKNQATTENGRKRKRSLQTKENSDSVKEENGTETKSNNNDLKSVGFRQN 120

Query: 349 GSRRKSKPRRAAEAGVEC 296
           GSRRK+KPRRAAEAGVEC
Sbjct: 121 GSRRKNKPRRAAEAGVEC 138


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