BLASTX nr result
ID: Coptis21_contig00009110
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00009110 (772 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ADL36568.1| ALF domain class transcription factor [Malus x do... 229 6e-58 ref|XP_003633111.1| PREDICTED: PHD finger protein ALFIN-LIKE 5-l... 226 4e-57 ref|XP_002516111.1| DNA binding protein, putative [Ricinus commu... 226 5e-57 ref|XP_002514076.1| DNA binding protein, putative [Ricinus commu... 225 7e-57 ref|NP_001237834.1| PHD2 [Glycine max] gi|115394650|gb|ABI97241.... 225 7e-57 >gb|ADL36568.1| ALF domain class transcription factor [Malus x domestica] Length = 258 Score = 229 bits (583), Expect = 6e-58 Identities = 112/142 (78%), Positives = 118/142 (83%) Frame = +3 Query: 33 MDGSGTQYNPRTVEEVFRDFKGRRAGMIKALTDDVEDFFQQCDPEKENLCLYGFPSEQWX 212 MDG G YNPRTVEEVFRDFKGRRAGMIKALT +VEDFFQQCDPEKENLCLYGFPSEQW Sbjct: 1 MDG-GAPYNPRTVEEVFRDFKGRRAGMIKALTTEVEDFFQQCDPEKENLCLYGFPSEQWE 59 Query: 213 XXXXXXXXXXXXXXXXXGINFARDGMQEKDWLALVAVHSDAWLLAVAFYFGARFGFDRSD 392 GINFARDGMQEKDWL+LVAVHSDAWLLAVAFYFGARFGFD++D Sbjct: 60 VNLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDAWLLAVAFYFGARFGFDKAD 119 Query: 393 RKRLFNMINEMSTIYEVVTGAA 458 RKRLFNMINE+ TI+EVVTG A Sbjct: 120 RKRLFNMINELPTIFEVVTGTA 141 Score = 72.4 bits (176), Expect = 1e-10 Identities = 27/28 (96%), Positives = 28/28 (100%) Frame = +1 Query: 688 TLCGACGENYASDEFWICCDICEKWFHG 771 TLCGACGENYA+DEFWICCDICEKWFHG Sbjct: 203 TLCGACGENYAADEFWICCDICEKWFHG 230 >ref|XP_003633111.1| PREDICTED: PHD finger protein ALFIN-LIKE 5-like [Vitis vinifera] gi|297738599|emb|CBI27844.3| unnamed protein product [Vitis vinifera] Length = 252 Score = 226 bits (576), Expect = 4e-57 Identities = 110/142 (77%), Positives = 119/142 (83%) Frame = +3 Query: 33 MDGSGTQYNPRTVEEVFRDFKGRRAGMIKALTDDVEDFFQQCDPEKENLCLYGFPSEQWX 212 MDG G QYNPRTVEEVFRDFKGRRAGMIKALT DVE+F+QQCDPEKENLCLYGFP+E W Sbjct: 1 MDG-GPQYNPRTVEEVFRDFKGRRAGMIKALTTDVEEFYQQCDPEKENLCLYGFPNELWE 59 Query: 213 XXXXXXXXXXXXXXXXXGINFARDGMQEKDWLALVAVHSDAWLLAVAFYFGARFGFDRSD 392 GINFARDGMQEKDWL+LVAVHSDAWLLAVAFYFGARFGFD++D Sbjct: 60 VNLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDAWLLAVAFYFGARFGFDKAD 119 Query: 393 RKRLFNMINEMSTIYEVVTGAA 458 RKRLFNMIN++ TI+EVVTGAA Sbjct: 120 RKRLFNMINDLPTIFEVVTGAA 141 Score = 74.3 bits (181), Expect = 3e-11 Identities = 32/50 (64%), Positives = 32/50 (64%) Frame = +1 Query: 622 KPTQPKXXXXXXXXXXXXXXXXTLCGACGENYASDEFWICCDICEKWFHG 771 K QPK TLCGACGENYASDEFWICCDICEKWFHG Sbjct: 175 KGGQPKDEEEGLDEVDEEEHGDTLCGACGENYASDEFWICCDICEKWFHG 224 >ref|XP_002516111.1| DNA binding protein, putative [Ricinus communis] gi|223544597|gb|EEF46113.1| DNA binding protein, putative [Ricinus communis] Length = 251 Score = 226 bits (575), Expect = 5e-57 Identities = 109/142 (76%), Positives = 118/142 (83%) Frame = +3 Query: 33 MDGSGTQYNPRTVEEVFRDFKGRRAGMIKALTDDVEDFFQQCDPEKENLCLYGFPSEQWX 212 MDG G YNPRTVEEVFRDFKGRRAGMI+ALT DVE+F+QQCDPEKENLCLYGFPSEQW Sbjct: 1 MDG-GASYNPRTVEEVFRDFKGRRAGMIRALTTDVEEFYQQCDPEKENLCLYGFPSEQWE 59 Query: 213 XXXXXXXXXXXXXXXXXGINFARDGMQEKDWLALVAVHSDAWLLAVAFYFGARFGFDRSD 392 GINFARDGMQEKDWL+LVAVHSDAWLLAVAFYFGARFGFD++D Sbjct: 60 VNLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDAWLLAVAFYFGARFGFDKAD 119 Query: 393 RKRLFNMINEMSTIYEVVTGAA 458 RKRLFNMIN++ TI+EVVTG A Sbjct: 120 RKRLFNMINDLPTIFEVVTGTA 141 Score = 73.6 bits (179), Expect = 5e-11 Identities = 28/28 (100%), Positives = 28/28 (100%) Frame = +1 Query: 688 TLCGACGENYASDEFWICCDICEKWFHG 771 TLCGACGENYASDEFWICCDICEKWFHG Sbjct: 196 TLCGACGENYASDEFWICCDICEKWFHG 223 >ref|XP_002514076.1| DNA binding protein, putative [Ricinus communis] gi|223546532|gb|EEF48030.1| DNA binding protein, putative [Ricinus communis] Length = 251 Score = 225 bits (574), Expect = 7e-57 Identities = 109/142 (76%), Positives = 118/142 (83%) Frame = +3 Query: 33 MDGSGTQYNPRTVEEVFRDFKGRRAGMIKALTDDVEDFFQQCDPEKENLCLYGFPSEQWX 212 MDG G QYNPRTVEEVFRDFKGRRAGMIKALT DVE+F+QQCDPEKENLCLYGFP+EQW Sbjct: 1 MDG-GVQYNPRTVEEVFRDFKGRRAGMIKALTTDVEEFYQQCDPEKENLCLYGFPNEQWE 59 Query: 213 XXXXXXXXXXXXXXXXXGINFARDGMQEKDWLALVAVHSDAWLLAVAFYFGARFGFDRSD 392 GINFARDGMQEKDWL+LVAVHSDAWLLAVAFYFGARFGFD++D Sbjct: 60 VNLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDAWLLAVAFYFGARFGFDKAD 119 Query: 393 RKRLFNMINEMSTIYEVVTGAA 458 RKRLF MIN++ TI+EVVTG A Sbjct: 120 RKRLFTMINDLPTIFEVVTGTA 141 Score = 72.8 bits (177), Expect = 8e-11 Identities = 30/47 (63%), Positives = 31/47 (65%) Frame = +1 Query: 631 QPKXXXXXXXXXXXXXXXXTLCGACGENYASDEFWICCDICEKWFHG 771 QPK TLCGACGENYA+DEFWICCDICEKWFHG Sbjct: 177 QPKDEDEGLDEEDEEEHGDTLCGACGENYAADEFWICCDICEKWFHG 223 >ref|NP_001237834.1| PHD2 [Glycine max] gi|115394650|gb|ABI97241.1| PHD2 [Glycine max] Length = 252 Score = 225 bits (574), Expect = 7e-57 Identities = 105/142 (73%), Positives = 118/142 (83%) Frame = +3 Query: 33 MDGSGTQYNPRTVEEVFRDFKGRRAGMIKALTDDVEDFFQQCDPEKENLCLYGFPSEQWX 212 MDG G YNPRTVE+VFRDFKGRRAGMIKALT DVE+FFQQCDPEK+NLCLYGFP+EQW Sbjct: 1 MDGGGVNYNPRTVEQVFRDFKGRRAGMIKALTTDVEEFFQQCDPEKDNLCLYGFPNEQWE 60 Query: 213 XXXXXXXXXXXXXXXXXGINFARDGMQEKDWLALVAVHSDAWLLAVAFYFGARFGFDRSD 392 GINFARDGMQ+KDWL+LVAVHSDAWLLAVAFYFGARFGFD +D Sbjct: 61 VNLPAEEVPPELPEPALGINFARDGMQDKDWLSLVAVHSDAWLLAVAFYFGARFGFDNAD 120 Query: 393 RKRLFNMINEMSTIYEVVTGAA 458 RKRLF+MIN++ TI+E+VTG+A Sbjct: 121 RKRLFSMINDLPTIFEIVTGSA 142 Score = 71.6 bits (174), Expect = 2e-10 Identities = 27/28 (96%), Positives = 28/28 (100%) Frame = +1 Query: 688 TLCGACGENYASDEFWICCDICEKWFHG 771 TLCGACGE+YASDEFWICCDICEKWFHG Sbjct: 197 TLCGACGEHYASDEFWICCDICEKWFHG 224