BLASTX nr result

ID: Coptis21_contig00009110 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00009110
         (772 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADL36568.1| ALF domain class transcription factor [Malus x do...   229   6e-58
ref|XP_003633111.1| PREDICTED: PHD finger protein ALFIN-LIKE 5-l...   226   4e-57
ref|XP_002516111.1| DNA binding protein, putative [Ricinus commu...   226   5e-57
ref|XP_002514076.1| DNA binding protein, putative [Ricinus commu...   225   7e-57
ref|NP_001237834.1| PHD2 [Glycine max] gi|115394650|gb|ABI97241....   225   7e-57

>gb|ADL36568.1| ALF domain class transcription factor [Malus x domestica]
          Length = 258

 Score =  229 bits (583), Expect = 6e-58
 Identities = 112/142 (78%), Positives = 118/142 (83%)
 Frame = +3

Query: 33  MDGSGTQYNPRTVEEVFRDFKGRRAGMIKALTDDVEDFFQQCDPEKENLCLYGFPSEQWX 212
           MDG G  YNPRTVEEVFRDFKGRRAGMIKALT +VEDFFQQCDPEKENLCLYGFPSEQW 
Sbjct: 1   MDG-GAPYNPRTVEEVFRDFKGRRAGMIKALTTEVEDFFQQCDPEKENLCLYGFPSEQWE 59

Query: 213 XXXXXXXXXXXXXXXXXGINFARDGMQEKDWLALVAVHSDAWLLAVAFYFGARFGFDRSD 392
                            GINFARDGMQEKDWL+LVAVHSDAWLLAVAFYFGARFGFD++D
Sbjct: 60  VNLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDAWLLAVAFYFGARFGFDKAD 119

Query: 393 RKRLFNMINEMSTIYEVVTGAA 458
           RKRLFNMINE+ TI+EVVTG A
Sbjct: 120 RKRLFNMINELPTIFEVVTGTA 141



 Score = 72.4 bits (176), Expect = 1e-10
 Identities = 27/28 (96%), Positives = 28/28 (100%)
 Frame = +1

Query: 688 TLCGACGENYASDEFWICCDICEKWFHG 771
           TLCGACGENYA+DEFWICCDICEKWFHG
Sbjct: 203 TLCGACGENYAADEFWICCDICEKWFHG 230


>ref|XP_003633111.1| PREDICTED: PHD finger protein ALFIN-LIKE 5-like [Vitis vinifera]
           gi|297738599|emb|CBI27844.3| unnamed protein product
           [Vitis vinifera]
          Length = 252

 Score =  226 bits (576), Expect = 4e-57
 Identities = 110/142 (77%), Positives = 119/142 (83%)
 Frame = +3

Query: 33  MDGSGTQYNPRTVEEVFRDFKGRRAGMIKALTDDVEDFFQQCDPEKENLCLYGFPSEQWX 212
           MDG G QYNPRTVEEVFRDFKGRRAGMIKALT DVE+F+QQCDPEKENLCLYGFP+E W 
Sbjct: 1   MDG-GPQYNPRTVEEVFRDFKGRRAGMIKALTTDVEEFYQQCDPEKENLCLYGFPNELWE 59

Query: 213 XXXXXXXXXXXXXXXXXGINFARDGMQEKDWLALVAVHSDAWLLAVAFYFGARFGFDRSD 392
                            GINFARDGMQEKDWL+LVAVHSDAWLLAVAFYFGARFGFD++D
Sbjct: 60  VNLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDAWLLAVAFYFGARFGFDKAD 119

Query: 393 RKRLFNMINEMSTIYEVVTGAA 458
           RKRLFNMIN++ TI+EVVTGAA
Sbjct: 120 RKRLFNMINDLPTIFEVVTGAA 141



 Score = 74.3 bits (181), Expect = 3e-11
 Identities = 32/50 (64%), Positives = 32/50 (64%)
 Frame = +1

Query: 622 KPTQPKXXXXXXXXXXXXXXXXTLCGACGENYASDEFWICCDICEKWFHG 771
           K  QPK                TLCGACGENYASDEFWICCDICEKWFHG
Sbjct: 175 KGGQPKDEEEGLDEVDEEEHGDTLCGACGENYASDEFWICCDICEKWFHG 224


>ref|XP_002516111.1| DNA binding protein, putative [Ricinus communis]
           gi|223544597|gb|EEF46113.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 251

 Score =  226 bits (575), Expect = 5e-57
 Identities = 109/142 (76%), Positives = 118/142 (83%)
 Frame = +3

Query: 33  MDGSGTQYNPRTVEEVFRDFKGRRAGMIKALTDDVEDFFQQCDPEKENLCLYGFPSEQWX 212
           MDG G  YNPRTVEEVFRDFKGRRAGMI+ALT DVE+F+QQCDPEKENLCLYGFPSEQW 
Sbjct: 1   MDG-GASYNPRTVEEVFRDFKGRRAGMIRALTTDVEEFYQQCDPEKENLCLYGFPSEQWE 59

Query: 213 XXXXXXXXXXXXXXXXXGINFARDGMQEKDWLALVAVHSDAWLLAVAFYFGARFGFDRSD 392
                            GINFARDGMQEKDWL+LVAVHSDAWLLAVAFYFGARFGFD++D
Sbjct: 60  VNLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDAWLLAVAFYFGARFGFDKAD 119

Query: 393 RKRLFNMINEMSTIYEVVTGAA 458
           RKRLFNMIN++ TI+EVVTG A
Sbjct: 120 RKRLFNMINDLPTIFEVVTGTA 141



 Score = 73.6 bits (179), Expect = 5e-11
 Identities = 28/28 (100%), Positives = 28/28 (100%)
 Frame = +1

Query: 688 TLCGACGENYASDEFWICCDICEKWFHG 771
           TLCGACGENYASDEFWICCDICEKWFHG
Sbjct: 196 TLCGACGENYASDEFWICCDICEKWFHG 223


>ref|XP_002514076.1| DNA binding protein, putative [Ricinus communis]
           gi|223546532|gb|EEF48030.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 251

 Score =  225 bits (574), Expect = 7e-57
 Identities = 109/142 (76%), Positives = 118/142 (83%)
 Frame = +3

Query: 33  MDGSGTQYNPRTVEEVFRDFKGRRAGMIKALTDDVEDFFQQCDPEKENLCLYGFPSEQWX 212
           MDG G QYNPRTVEEVFRDFKGRRAGMIKALT DVE+F+QQCDPEKENLCLYGFP+EQW 
Sbjct: 1   MDG-GVQYNPRTVEEVFRDFKGRRAGMIKALTTDVEEFYQQCDPEKENLCLYGFPNEQWE 59

Query: 213 XXXXXXXXXXXXXXXXXGINFARDGMQEKDWLALVAVHSDAWLLAVAFYFGARFGFDRSD 392
                            GINFARDGMQEKDWL+LVAVHSDAWLLAVAFYFGARFGFD++D
Sbjct: 60  VNLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDAWLLAVAFYFGARFGFDKAD 119

Query: 393 RKRLFNMINEMSTIYEVVTGAA 458
           RKRLF MIN++ TI+EVVTG A
Sbjct: 120 RKRLFTMINDLPTIFEVVTGTA 141



 Score = 72.8 bits (177), Expect = 8e-11
 Identities = 30/47 (63%), Positives = 31/47 (65%)
 Frame = +1

Query: 631 QPKXXXXXXXXXXXXXXXXTLCGACGENYASDEFWICCDICEKWFHG 771
           QPK                TLCGACGENYA+DEFWICCDICEKWFHG
Sbjct: 177 QPKDEDEGLDEEDEEEHGDTLCGACGENYAADEFWICCDICEKWFHG 223


>ref|NP_001237834.1| PHD2 [Glycine max] gi|115394650|gb|ABI97241.1| PHD2 [Glycine max]
          Length = 252

 Score =  225 bits (574), Expect = 7e-57
 Identities = 105/142 (73%), Positives = 118/142 (83%)
 Frame = +3

Query: 33  MDGSGTQYNPRTVEEVFRDFKGRRAGMIKALTDDVEDFFQQCDPEKENLCLYGFPSEQWX 212
           MDG G  YNPRTVE+VFRDFKGRRAGMIKALT DVE+FFQQCDPEK+NLCLYGFP+EQW 
Sbjct: 1   MDGGGVNYNPRTVEQVFRDFKGRRAGMIKALTTDVEEFFQQCDPEKDNLCLYGFPNEQWE 60

Query: 213 XXXXXXXXXXXXXXXXXGINFARDGMQEKDWLALVAVHSDAWLLAVAFYFGARFGFDRSD 392
                            GINFARDGMQ+KDWL+LVAVHSDAWLLAVAFYFGARFGFD +D
Sbjct: 61  VNLPAEEVPPELPEPALGINFARDGMQDKDWLSLVAVHSDAWLLAVAFYFGARFGFDNAD 120

Query: 393 RKRLFNMINEMSTIYEVVTGAA 458
           RKRLF+MIN++ TI+E+VTG+A
Sbjct: 121 RKRLFSMINDLPTIFEIVTGSA 142



 Score = 71.6 bits (174), Expect = 2e-10
 Identities = 27/28 (96%), Positives = 28/28 (100%)
 Frame = +1

Query: 688 TLCGACGENYASDEFWICCDICEKWFHG 771
           TLCGACGE+YASDEFWICCDICEKWFHG
Sbjct: 197 TLCGACGEHYASDEFWICCDICEKWFHG 224


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