BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00009057
         (1775 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320236.1| predicted protein [Populus trichocarpa] gi|2...   161   4e-42
gb|ABK95200.1| unknown [Populus trichocarpa]                          161   2e-41
ref|XP_002266107.1| PREDICTED: thylakoid membrane phosphoprotein...   165   4e-41
ref|NP_566086.1| thylakoid membrane phosphoprotein [Arabidopsis ...   157   5e-38
ref|XP_002880267.1| hypothetical protein ARALYDRAFT_483848 [Arab...   158   8e-38

>ref|XP_002320236.1| predicted protein [Populus trichocarpa] gi|222861009|gb|EEE98551.1|
            predicted protein [Populus trichocarpa]
          Length = 172

 Score =  161 bits (408), Expect(2) = 4e-42
 Identities = 83/130 (63%), Positives = 98/130 (75%)
 Frame = -3

Query: 1407 RKLARNVVTRXXXXXXXXXXXXXXXXXXEAPADVVGTEASEILKTVQEAWDKLEDKYAVT 1228
            RK+ARNV+T                    APA+V  TE  EI+KTVQEAWDK+EDKYAV+
Sbjct: 58   RKIARNVMTMATGE---------------APAEVASTELPEIVKTVQEAWDKVEDKYAVS 102

Query: 1227 LLAFAGVVGLFASFGMISAIDRLPIVPGVLELVGIGYSGWFAYKNLVFKPDREALIEKIK 1048
             L  AG V L+ S G+ISAIDRLP++PGVLELVGIGYSGWFAYKNLVFKPDREALI KIK
Sbjct: 103  SLVVAGGVALWGSTGLISAIDRLPLIPGVLELVGIGYSGWFAYKNLVFKPDREALIAKIK 162

Query: 1047 DSYKDILGSS 1018
            D+Y++++GSS
Sbjct: 163  DTYREVIGSS 172



 Score = 38.5 bits (88), Expect(2) = 4e-42
 Identities = 23/47 (48%), Positives = 29/47 (61%)
 Frame = -2

Query: 1669 VDSRAPRQPTAAASLQSVNLSNLHTSLEQSQNRPPSHQTWKTTAYCK 1529
            +D++A RQ +AAAS Q V+L  L     Q QNRP     WK TAYC+
Sbjct: 18   IDAKASRQ-SAAASPQCVSLPTLPPPPVQPQNRP-----WKATAYCR 58


>gb|ABK95200.1| unknown [Populus trichocarpa]
          Length = 172

 Score =  161 bits (408), Expect(2) = 2e-41
 Identities = 83/130 (63%), Positives = 98/130 (75%)
 Frame = -3

Query: 1407 RKLARNVVTRXXXXXXXXXXXXXXXXXXEAPADVVGTEASEILKTVQEAWDKLEDKYAVT 1228
            RK+ARNV+T                    APA+V  TE  EI+KTVQEAWDK+EDKYAV+
Sbjct: 58   RKIARNVMTMATGE---------------APAEVASTELPEIVKTVQEAWDKVEDKYAVS 102

Query: 1227 LLAFAGVVGLFASFGMISAIDRLPIVPGVLELVGIGYSGWFAYKNLVFKPDREALIEKIK 1048
             L  AG V L+ S G+ISAIDRLP++PGVLELVGIGYSGWFAYKNLVFKPDREALI KIK
Sbjct: 103  SLVVAGGVALWGSTGLISAIDRLPLIPGVLELVGIGYSGWFAYKNLVFKPDREALIAKIK 162

Query: 1047 DSYKDILGSS 1018
            D+Y++++GSS
Sbjct: 163  DTYREVIGSS 172



 Score = 35.8 bits (81), Expect(2) = 2e-41
 Identities = 22/47 (46%), Positives = 28/47 (59%)
 Frame = -2

Query: 1669 VDSRAPRQPTAAASLQSVNLSNLHTSLEQSQNRPPSHQTWKTTAYCK 1529
            +D++A RQ +AAAS Q V+L  L     Q QN P     WK TAYC+
Sbjct: 18   IDAKASRQ-SAAASPQCVSLPTLPPPPVQPQNGP-----WKATAYCR 58


>ref|XP_002266107.1| PREDICTED: thylakoid membrane phosphoprotein 14 kDa, chloroplastic
            [Vitis vinifera] gi|296089017|emb|CBI38720.3| unnamed
            protein product [Vitis vinifera]
          Length = 171

 Score =  165 bits (417), Expect(2) = 4e-41
 Identities = 84/130 (64%), Positives = 100/130 (76%)
 Frame = -3

Query: 1407 RKLARNVVTRXXXXXXXXXXXXXXXXXXEAPADVVGTEASEILKTVQEAWDKLEDKYAVT 1228
            RK+ARNV+                     APA+V  TE  EI+KTVQEAWDK+EDKYAV+
Sbjct: 57   RKIARNVIAMATGE---------------APAEVGTTEVPEIIKTVQEAWDKVEDKYAVS 101

Query: 1227 LLAFAGVVGLFASFGMISAIDRLPIVPGVLELVGIGYSGWFAYKNLVFKPDREALIEKIK 1048
             LA AG VGL+ S GM+SAID+LP+VPGVLE+VGIGYSGWFAYKNL+FKPDREALI+KIK
Sbjct: 102  SLAAAGFVGLWVSTGMVSAIDKLPLVPGVLEIVGIGYSGWFAYKNLIFKPDREALIQKIK 161

Query: 1047 DSYKDILGSS 1018
            D+YK+I+GSS
Sbjct: 162  DTYKEIIGSS 171



 Score = 31.6 bits (70), Expect(2) = 4e-41
 Identities = 21/47 (44%), Positives = 26/47 (55%)
 Frame = -2

Query: 1669 VDSRAPRQPTAAASLQSVNLSNLHTSLEQSQNRPPSHQTWKTTAYCK 1529
            +D +APRQ +AAAS Q V L  L      SQ+RP      K T YC+
Sbjct: 17   IDGKAPRQ-SAAASSQCVTLPTLPPPPVPSQHRP-----GKGTTYCR 57


>ref|NP_566086.1| thylakoid membrane phosphoprotein [Arabidopsis thaliana]
            gi|79324933|ref|NP_001031551.1| thylakoid membrane
            phosphoprotein [Arabidopsis thaliana]
            gi|38503349|sp|Q8LCA1.2|TMP14_ARATH RecName:
            Full=Thylakoid membrane phosphoprotein 14 kDa,
            chloroplastic; Flags: Precursor gi|3510256|gb|AAC33500.1|
            expressed protein [Arabidopsis thaliana]
            gi|17473794|gb|AAL38332.1| unknown protein [Arabidopsis
            thaliana] gi|21386997|gb|AAM47902.1| unknown protein
            [Arabidopsis thaliana] gi|330255664|gb|AEC10758.1|
            thylakoid membrane phosphoprotein [Arabidopsis thaliana]
            gi|330255665|gb|AEC10759.1| thylakoid membrane
            phosphoprotein [Arabidopsis thaliana]
          Length = 174

 Score =  157 bits (396), Expect(2) = 5e-38
 Identities = 84/133 (63%), Positives = 96/133 (72%), Gaps = 3/133 (2%)
 Frame = -3

Query: 1407 RKLARNVVTRXXXXXXXXXXXXXXXXXXEAPA---DVVGTEASEILKTVQEAWDKLEDKY 1237
            RK+ RNVVTR                   APA   +   TE  EI+KT QEAW+K++DKY
Sbjct: 54   RKIVRNVVTRATTEVGE------------APATTTEAETTELPEIVKTAQEAWEKVDDKY 101

Query: 1236 AVTLLAFAGVVGLFASFGMISAIDRLPIVPGVLELVGIGYSGWFAYKNLVFKPDREALIE 1057
            A+  LAFAGVV L+ S GMISAIDRLP+VPGVLELVGIGY+GWF YKNLVFKPDREAL E
Sbjct: 102  AIGSLAFAGVVALWGSAGMISAIDRLPLVPGVLELVGIGYTGWFTYKNLVFKPDREALFE 161

Query: 1056 KIKDSYKDILGSS 1018
            K+K +YKDILGSS
Sbjct: 162  KVKSTYKDILGSS 174



 Score = 29.3 bits (64), Expect(2) = 5e-38
 Identities = 19/47 (40%), Positives = 24/47 (51%)
 Frame = -2

Query: 1669 VDSRAPRQPTAAASLQSVNLSNLHTSLEQSQNRPPSHQTWKTTAYCK 1529
            +DSRAP    A+AS  S +  +L T   QS  R       K TAYC+
Sbjct: 13   IDSRAPPSRLASASASSPSCISLPTLPIQSHTRAA-----KATAYCR 54


>ref|XP_002880267.1| hypothetical protein ARALYDRAFT_483848 [Arabidopsis lyrata subsp.
            lyrata] gi|297326106|gb|EFH56526.1| hypothetical protein
            ARALYDRAFT_483848 [Arabidopsis lyrata subsp. lyrata]
          Length = 177

 Score =  158 bits (400), Expect(2) = 8e-38
 Identities = 85/133 (63%), Positives = 97/133 (72%), Gaps = 3/133 (2%)
 Frame = -3

Query: 1407 RKLARNVVTRXXXXXXXXXXXXXXXXXXEAPA---DVVGTEASEILKTVQEAWDKLEDKY 1237
            RK+ RNVVTR                   APA   +   TE  EI+KT QEAW+K+EDKY
Sbjct: 57   RKIVRNVVTRATTEVGE------------APATTTEAETTELPEIVKTAQEAWEKVEDKY 104

Query: 1236 AVTLLAFAGVVGLFASFGMISAIDRLPIVPGVLELVGIGYSGWFAYKNLVFKPDREALIE 1057
            A+  LAFAGVV L+ S GMISAIDRLP+VPGVLELVGIGY+GWF YKNLVFKPDREAL E
Sbjct: 105  AIGSLAFAGVVALWGSAGMISAIDRLPLVPGVLELVGIGYTGWFTYKNLVFKPDREALFE 164

Query: 1056 KIKDSYKDILGSS 1018
            K+K++YKDILGSS
Sbjct: 165  KVKNTYKDILGSS 177



 Score = 26.9 bits (58), Expect(2) = 8e-38
 Identities = 21/50 (42%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
 Frame = -2

Query: 1669 VDSRAP--RQPTAAASLQS-VNLSNLHTSLEQSQNRPPSHQTWKTTAYCK 1529
            +DSRAP  RQ +A+AS  S ++L  L     QS +R       K TAYC+
Sbjct: 13   IDSRAPPSRQASASASSPSCISLPTLPPPPIQSHSRAA-----KATAYCR 57