BLASTX nr result

ID: Coptis21_contig00009020 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00009020
         (372 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003553538.1| PREDICTED: probable LRR receptor-like serine...   129   3e-28
ref|XP_003520642.1| PREDICTED: probable LRR receptor-like serine...   128   4e-28
ref|XP_002326166.1| predicted protein [Populus trichocarpa] gi|2...   125   3e-27
emb|CBI32626.3| unnamed protein product [Vitis vinifera]              124   8e-27
ref|XP_002275389.1| PREDICTED: probable LRR receptor-like serine...   124   8e-27

>ref|XP_003553538.1| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase
            At1g67720-like [Glycine max]
          Length = 936

 Score =  129 bits (323), Expect = 3e-28
 Identities = 64/101 (63%), Positives = 77/101 (76%)
 Frame = -3

Query: 370  QGIIDPSLRNEFDIQSVWKIAEKAMMCVQSHGSIRPSISEVLKDIQDAIMIERGTEEARE 191
            QGIIDP LRN++D+QS+WKIAEKA+MCVQ HG +RPSISE LK+IQDAI IER  E  RE
Sbjct: 836  QGIIDPLLRNDYDLQSMWKIAEKALMCVQPHGHMRPSISEALKEIQDAISIERQAEALRE 895

Query: 190  SKYGDLLKVSTNSSTKLGSPEMGVTEPYVSFDESIPQPTAR 68
                D+ K S +SS  +GS ++G  E Y+S DESI QPTAR
Sbjct: 896  GNSDDMSKNSFHSSMNMGSMDLGGAESYLSIDESIAQPTAR 936


>ref|XP_003520642.1| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase
            At1g67720-like [Glycine max]
          Length = 937

 Score =  128 bits (322), Expect = 4e-28
 Identities = 63/101 (62%), Positives = 78/101 (77%)
 Frame = -3

Query: 370  QGIIDPSLRNEFDIQSVWKIAEKAMMCVQSHGSIRPSISEVLKDIQDAIMIERGTEEARE 191
            QGIIDP LRN++D+QS+WKIAEKA+MCVQ HG +RP+ISEV+K+IQDAI IER  E  RE
Sbjct: 837  QGIIDPLLRNDYDLQSMWKIAEKALMCVQPHGHMRPTISEVIKEIQDAISIERQAEALRE 896

Query: 190  SKYGDLLKVSTNSSTKLGSPEMGVTEPYVSFDESIPQPTAR 68
                D+ K S +SS  +GS ++G  E Y+S DESI QPTAR
Sbjct: 897  GNSDDMSKHSFHSSMNMGSMDLGGAESYLSIDESIAQPTAR 937


>ref|XP_002326166.1| predicted protein [Populus trichocarpa] gi|222833359|gb|EEE71836.1|
            predicted protein [Populus trichocarpa]
          Length = 924

 Score =  125 bits (315), Expect = 3e-27
 Identities = 64/101 (63%), Positives = 78/101 (77%)
 Frame = -3

Query: 370  QGIIDPSLRNEFDIQSVWKIAEKAMMCVQSHGSIRPSISEVLKDIQDAIMIERGTEEARE 191
            QGIIDPSL  E+DIQS+WKIAEKA+MCVQ HG +RPSISEVLK+IQDAI+IER    ARE
Sbjct: 824  QGIIDPSLCGEYDIQSMWKIAEKALMCVQPHGHMRPSISEVLKEIQDAILIEREVTAARE 883

Query: 190  SKYGDLLKVSTNSSTKLGSPEMGVTEPYVSFDESIPQPTAR 68
                ++ + S +SS  LGS ++G  E Y++ DESI QPTAR
Sbjct: 884  DISDEMSRNSVHSSLNLGSLDLGGAENYLALDESIAQPTAR 924


>emb|CBI32626.3| unnamed protein product [Vitis vinifera]
          Length = 924

 Score =  124 bits (311), Expect = 8e-27
 Identities = 65/101 (64%), Positives = 80/101 (79%)
 Frame = -3

Query: 370  QGIIDPSLRNEFDIQSVWKIAEKAMMCVQSHGSIRPSISEVLKDIQDAIMIERGTEEARE 191
            QGIIDPSLR+E+DIQS+WKIAEKA+MCVQ HGS+RP ISEV+K+IQ+AI IERG E ARE
Sbjct: 826  QGIIDPSLRDEYDIQSMWKIAEKALMCVQPHGSMRPPISEVIKEIQEAISIERGAEAARE 885

Query: 190  SKYGDLLKVSTNSSTKLGSPEMGVTEPYVSFDESIPQPTAR 68
                D  + S +SS  +G  ++G TE Y+SFDESI +PT R
Sbjct: 886  GN-SDASRNSIHSSINMGI-DVGPTENYLSFDESIARPTPR 924


>ref|XP_002275389.1| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase
            At1g67720-like [Vitis vinifera]
          Length = 927

 Score =  124 bits (311), Expect = 8e-27
 Identities = 65/101 (64%), Positives = 80/101 (79%)
 Frame = -3

Query: 370  QGIIDPSLRNEFDIQSVWKIAEKAMMCVQSHGSIRPSISEVLKDIQDAIMIERGTEEARE 191
            QGIIDPSLR+E+DIQS+WKIAEKA+MCVQ HGS+RP ISEV+K+IQ+AI IERG E ARE
Sbjct: 829  QGIIDPSLRDEYDIQSMWKIAEKALMCVQPHGSMRPPISEVIKEIQEAISIERGAEAARE 888

Query: 190  SKYGDLLKVSTNSSTKLGSPEMGVTEPYVSFDESIPQPTAR 68
                D  + S +SS  +G  ++G TE Y+SFDESI +PT R
Sbjct: 889  GN-SDASRNSIHSSINMGI-DVGPTENYLSFDESIARPTPR 927


Top