BLASTX nr result

ID: Coptis21_contig00009001 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00009001
         (589 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002322148.1| predicted protein [Populus trichocarpa] gi|2...    97   3e-18
ref|XP_003608927.1| hypothetical protein MTR_4g106500 [Medicago ...    95   8e-18
ref|XP_002511462.1| conserved hypothetical protein [Ricinus comm...    94   2e-17
gb|AFK43736.1| unknown [Medicago truncatula]                           94   2e-17
ref|XP_003525171.1| PREDICTED: uncharacterized protein LOC100813...    93   4e-17

>ref|XP_002322148.1| predicted protein [Populus trichocarpa] gi|222869144|gb|EEF06275.1|
           predicted protein [Populus trichocarpa]
          Length = 82

 Score = 96.7 bits (239), Expect = 3e-18
 Identities = 45/83 (54%), Positives = 57/83 (68%)
 Frame = +3

Query: 129 MEKSKSYGASWADQWDYNNPDPVHAEDPNKKKRGTSNKYGKKVGEGFDKTKAVASTGMKK 308
           M  + S+  SWADQWDYN PDP   +        ++ KY +KVGEG  KTK VASTG+KK
Sbjct: 1   MSGNSSHETSWADQWDYN-PDPAVYDHSKDSSSDSTAKYKQKVGEGLGKTKQVASTGIKK 59

Query: 309 VKEGTTLGFNWVKEKYNKRNQKN 377
           VKEGT++GF W+K+KY K  QK+
Sbjct: 60  VKEGTSVGFRWIKDKYQKTTQKH 82


>ref|XP_003608927.1| hypothetical protein MTR_4g106500 [Medicago truncatula]
           gi|355509982|gb|AES91124.1| hypothetical protein
           MTR_4g106500 [Medicago truncatula]
          Length = 82

 Score = 95.1 bits (235), Expect = 8e-18
 Identities = 44/78 (56%), Positives = 57/78 (73%)
 Frame = +3

Query: 144 SYGASWADQWDYNNPDPVHAEDPNKKKRGTSNKYGKKVGEGFDKTKAVASTGMKKVKEGT 323
           SYG SWADQWD N PDP+ A+  N K   ++ KY +K GEG  KTK VASTG+KK+K+GT
Sbjct: 9   SYGTSWADQWD-NGPDPIMADTNNNK---STTKYKEKFGEGLGKTKGVASTGVKKLKDGT 64

Query: 324 TLGFNWVKEKYNKRNQKN 377
           ++G NW+K KY+K   K+
Sbjct: 65  SVGLNWIKTKYSKATHKH 82


>ref|XP_002511462.1| conserved hypothetical protein [Ricinus communis]
           gi|223550577|gb|EEF52064.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 81

 Score = 94.0 bits (232), Expect = 2e-17
 Identities = 47/76 (61%), Positives = 56/76 (73%), Gaps = 2/76 (2%)
 Frame = +3

Query: 156 SWADQWDYNNPDPVHAEDPNKKKRGTSN--KYGKKVGEGFDKTKAVASTGMKKVKEGTTL 329
           SWADQWD + PDPVH +  N K   TS+  KY +KVGEG  KTK VASTG KKVKEGT  
Sbjct: 8   SWADQWD-DGPDPVH-DYQNSKSNSTSSTAKYKQKVGEGLGKTKEVASTGFKKVKEGTVS 65

Query: 330 GFNWVKEKYNKRNQKN 377
           GF+W+K+KY K+ QK+
Sbjct: 66  GFHWIKDKYQKKTQKH 81


>gb|AFK43736.1| unknown [Medicago truncatula]
          Length = 82

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 43/78 (55%), Positives = 57/78 (73%)
 Frame = +3

Query: 144 SYGASWADQWDYNNPDPVHAEDPNKKKRGTSNKYGKKVGEGFDKTKAVASTGMKKVKEGT 323
           SYG SWADQWD N PDP+ A+  N K   ++ KY +K GEG  KTK VASTG+KK+K+GT
Sbjct: 9   SYGTSWADQWD-NGPDPIMADTNNNK---STTKYKEKFGEGLGKTKGVASTGVKKLKDGT 64

Query: 324 TLGFNWVKEKYNKRNQKN 377
           ++G NW+K +Y+K   K+
Sbjct: 65  SVGLNWIKTEYSKATHKH 82


>ref|XP_003525171.1| PREDICTED: uncharacterized protein LOC100813287 [Glycine max]
          Length = 80

 Score = 92.8 bits (229), Expect = 4e-17
 Identities = 42/74 (56%), Positives = 55/74 (74%)
 Frame = +3

Query: 156 SWADQWDYNNPDPVHAEDPNKKKRGTSNKYGKKVGEGFDKTKAVASTGMKKVKEGTTLGF 335
           SWADQWD + PDPV     NK     + KY +K+GEGF KTKAVASTG+KK+K+GT++G 
Sbjct: 8   SWADQWD-DGPDPVMVGSNNKNSNDNTAKYKQKLGEGFGKTKAVASTGVKKLKDGTSVGL 66

Query: 336 NWVKEKYNKRNQKN 377
           +W+K KY+K  QK+
Sbjct: 67  HWIKTKYSKATQKH 80


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