BLASTX nr result
ID: Coptis21_contig00008500
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00008500
(1613 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002519492.1| histidyl-tRNA synthetase, putative [Ricinus ... 700 0.0
ref|XP_002277086.1| PREDICTED: histidyl-tRNA synthetase-like [Vi... 695 0.0
ref|XP_004143277.1| PREDICTED: histidine--tRNA ligase-like [Cucu... 694 0.0
ref|XP_004156273.1| PREDICTED: histidine--tRNA ligase-like [Cucu... 692 0.0
ref|XP_002871031.1| histidyl-tRNA synthetase 1 [Arabidopsis lyra... 671 0.0
>ref|XP_002519492.1| histidyl-tRNA synthetase, putative [Ricinus communis]
gi|223541355|gb|EEF42906.1| histidyl-tRNA synthetase,
putative [Ricinus communis]
Length = 503
Score = 700 bits (1806), Expect = 0.0
Identities = 361/510 (70%), Positives = 408/510 (80%), Gaps = 2/510 (0%)
Frame = +2
Query: 44 LHQKFNLYIKPTSLFHFSKTPFLQNFSKPLYPLHFSFYQYTIPQYTILQKPRYHCXXXXX 223
LH +F+L+IKP L S T F + P L S Y T+ P
Sbjct: 8 LHIRFSLHIKPIFL---SFTRFSHSSLSPR-KLPLSIYPRTLSSIASSYSP--------- 54
Query: 224 XXXXXXXXXEGGRSGSFSQPP--VFETREKIDVNPPKGTRDFAPEDMRLRTWLFQNFREV 397
GGRSG + PP + E EKIDVNPPKGTRDF PE+MRLR WLF NFREV
Sbjct: 55 -IDNVTCGAGGGRSGGLTSPPPVLEEPIEKIDVNPPKGTRDFPPEEMRLRNWLFNNFREV 113
Query: 398 SRLFGFEEVDFPVLESEALFIRKAGEEIRDQLYCFEDRGNRRVALRPELTPSLARMVIQK 577
S+L+GFEEVDFPVLE+EALFIRKAGEEIRDQLYCFEDRGNRRVALRPELTPSLAR+VIQK
Sbjct: 114 SKLYGFEEVDFPVLETEALFIRKAGEEIRDQLYCFEDRGNRRVALRPELTPSLARLVIQK 173
Query: 578 GKSVPLPLKWFAIGQCWXXXXXXXXXXXEHYQWNMDIIGVPEVTAEAELISSIVTFFKRL 757
GKSVPLPLKWFA+GQCW EHYQWNMDIIGVP VTAEAELISSIVTFFKR+
Sbjct: 174 GKSVPLPLKWFAVGQCWRYERMTRGRRREHYQWNMDIIGVPGVTAEAELISSIVTFFKRI 233
Query: 758 GITSSDVGFRVSSRKVLQEVLRGYSVPENLFSKVCIIIDKMEKIPRDDIKRDLKTAGVSE 937
GIT+SDVGF+VSSRKVLQEVLR YS+ +NLF KVCIIIDK+EKIP +IK++LK+ G+SE
Sbjct: 234 GITASDVGFKVSSRKVLQEVLRCYSISDNLFGKVCIIIDKIEKIPVAEIKKELKSVGMSE 293
Query: 938 EAIEELLQVLSIKSLSKLEEILGASGDAVSELKTLFSLADKFGYSDWIQFDASVVRGLAY 1117
EA+EELLQVLSIKSL+KLEEILG +G+A+ +LK LFSLA+KFGYS+WIQFDASVVRGLAY
Sbjct: 294 EAVEELLQVLSIKSLTKLEEILGGAGEAIGDLKQLFSLAEKFGYSEWIQFDASVVRGLAY 353
Query: 1118 YTGIVFEGFDREGKLRAICGGGRYDRLLSTFGGDDIPACGFGFGDAVIVXXXXXXXXXXX 1297
YTGIVFEGFDREGKLRAICGGGRYDRLLSTFGGDD+PACGFGFGDAVIV
Sbjct: 354 YTGIVFEGFDREGKLRAICGGGRYDRLLSTFGGDDLPACGFGFGDAVIVELLKEKGLLPE 413
Query: 1298 XXXXVENIVCSLDQDLQGEASMVATVLRQKGQSVDLVLENKPLKWVFKRATRINADRLIL 1477
VENIVC+LD DLQG A+ VAT+LR+KGQ+VDLVLE+KPLKWVFKRA RINA +L+L
Sbjct: 414 LGLQVENIVCALDSDLQGAAARVATILREKGQNVDLVLEDKPLKWVFKRAARINAQKLVL 473
Query: 1478 VGKSEWENGMVGVKNLATGEQYDVKLDQLE 1567
VGK+EW+ GMVGVK L+TGEQY+VKLD+L+
Sbjct: 474 VGKTEWQKGMVGVKILSTGEQYEVKLDELQ 503
>ref|XP_002277086.1| PREDICTED: histidyl-tRNA synthetase-like [Vitis vinifera]
Length = 554
Score = 695 bits (1793), Expect = 0.0
Identities = 344/438 (78%), Positives = 384/438 (87%)
Frame = +2
Query: 254 GGRSGSFSQPPVFETREKIDVNPPKGTRDFAPEDMRLRTWLFQNFREVSRLFGFEEVDFP 433
GGRSG+ S PP+ ++ +KIDVNPP+GTRDF PEDMRLR WLF +FREVSR FGFEEVDFP
Sbjct: 117 GGRSGAISPPPIEDSVQKIDVNPPRGTRDFPPEDMRLRNWLFNHFREVSRSFGFEEVDFP 176
Query: 434 VLESEALFIRKAGEEIRDQLYCFEDRGNRRVALRPELTPSLARMVIQKGKSVPLPLKWFA 613
VLESEALFIRKAGEEIRDQLYCFEDRGNRRVALRPELTPSLAR+VIQKGKSV LPLKWFA
Sbjct: 177 VLESEALFIRKAGEEIRDQLYCFEDRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFA 236
Query: 614 IGQCWXXXXXXXXXXXEHYQWNMDIIGVPEVTAEAELISSIVTFFKRLGITSSDVGFRVS 793
+GQCW EHYQWNMDIIGVPEV AEAELISSIVTFFKR+GIT+SDVGF+VS
Sbjct: 237 VGQCWRYERMTRGRRREHYQWNMDIIGVPEVMAEAELISSIVTFFKRVGITASDVGFKVS 296
Query: 794 SRKVLQEVLRGYSVPENLFSKVCIIIDKMEKIPRDDIKRDLKTAGVSEEAIEELLQVLSI 973
SRKVLQEVLR YS+PENLF KVC+IIDKMEKIP D+I ++LK+ G+SEEAI++LLQVLSI
Sbjct: 297 SRKVLQEVLRCYSIPENLFGKVCVIIDKMEKIPIDEITKELKSLGMSEEAIKDLLQVLSI 356
Query: 974 KSLSKLEEILGASGDAVSELKTLFSLADKFGYSDWIQFDASVVRGLAYYTGIVFEGFDRE 1153
KSL+KLEEILGA+G+AV++LK LFSLA+KFGYS+WIQFDASVVRGLAYYTGIVFEGFDRE
Sbjct: 357 KSLTKLEEILGAAGEAVADLKQLFSLAEKFGYSEWIQFDASVVRGLAYYTGIVFEGFDRE 416
Query: 1154 GKLRAICGGGRYDRLLSTFGGDDIPACGFGFGDAVIVXXXXXXXXXXXXXXXVENIVCSL 1333
GKLRAICGGGRYDRLLSTFGGDD+PACGFGFGDAVI+ VENIVC+L
Sbjct: 417 GKLRAICGGGRYDRLLSTFGGDDVPACGFGFGDAVIIELLKEKGLLPELSLQVENIVCAL 476
Query: 1334 DQDLQGEASMVATVLRQKGQSVDLVLENKPLKWVFKRATRINADRLILVGKSEWENGMVG 1513
D LQG A+ VAT LR+KGQSVDLVLE+KPLKWVFKRA R NA RLILVG SEW+ GMV
Sbjct: 477 DHYLQGAAAAVATRLREKGQSVDLVLESKPLKWVFKRAARTNAQRLILVGNSEWQRGMVS 536
Query: 1514 VKNLATGEQYDVKLDQLE 1567
VK L++GEQY++KLD+LE
Sbjct: 537 VKILSSGEQYEIKLDELE 554
>ref|XP_004143277.1| PREDICTED: histidine--tRNA ligase-like [Cucumis sativus]
Length = 507
Score = 694 bits (1792), Expect = 0.0
Identities = 340/438 (77%), Positives = 383/438 (87%)
Frame = +2
Query: 254 GGRSGSFSQPPVFETREKIDVNPPKGTRDFAPEDMRLRTWLFQNFREVSRLFGFEEVDFP 433
GGRSG+ S P E ++IDVNPPKGTRDF PEDMRLR WLF NFREVSR++GFEEVD+P
Sbjct: 70 GGRSGALSPAPTTEELQRIDVNPPKGTRDFPPEDMRLRNWLFNNFREVSRVYGFEEVDYP 129
Query: 434 VLESEALFIRKAGEEIRDQLYCFEDRGNRRVALRPELTPSLARMVIQKGKSVPLPLKWFA 613
VLESEALFIRKAGEEIRDQLYCFEDRGNRRVALRPELTPSLAR+VIQKGKS+ LP+KWFA
Sbjct: 130 VLESEALFIRKAGEEIRDQLYCFEDRGNRRVALRPELTPSLARLVIQKGKSLSLPIKWFA 189
Query: 614 IGQCWXXXXXXXXXXXEHYQWNMDIIGVPEVTAEAELISSIVTFFKRLGITSSDVGFRVS 793
IGQCW EHYQWNMDI+GVP VTAEAEL+SSIVTFFK++GIT+SDVGF+VS
Sbjct: 190 IGQCWRYERMTRGRRREHYQWNMDILGVPGVTAEAELLSSIVTFFKKVGITASDVGFKVS 249
Query: 794 SRKVLQEVLRGYSVPENLFSKVCIIIDKMEKIPRDDIKRDLKTAGVSEEAIEELLQVLSI 973
SRKVLQ+VL+ Y +P+N+F KVCIIIDK+EKIP D++K++LK GVSE+AIEELLQVLS+
Sbjct: 250 SRKVLQDVLKCYGIPQNMFGKVCIIIDKIEKIPLDEMKKELKVVGVSEDAIEELLQVLSV 309
Query: 974 KSLSKLEEILGASGDAVSELKTLFSLADKFGYSDWIQFDASVVRGLAYYTGIVFEGFDRE 1153
KSL+KLEE+LG G+A+S+LK LFSLA+KFGYSDWIQFDAS+VRGLAYYTGIVFEGFDR
Sbjct: 310 KSLTKLEEVLGGGGEALSDLKQLFSLAEKFGYSDWIQFDASIVRGLAYYTGIVFEGFDRG 369
Query: 1154 GKLRAICGGGRYDRLLSTFGGDDIPACGFGFGDAVIVXXXXXXXXXXXXXXXVENIVCSL 1333
GKLRAICGGGRYDRLLSTFGGDDIPACGFGFGDAVIV VENIVC+L
Sbjct: 370 GKLRAICGGGRYDRLLSTFGGDDIPACGFGFGDAVIVELLKEKKLLPELNAEVENIVCAL 429
Query: 1334 DQDLQGEASMVATVLRQKGQSVDLVLENKPLKWVFKRATRINADRLILVGKSEWENGMVG 1513
D DLQG AS VAT+LR+KGQ+VDLVLENKPLKWVFKRATRINA RLILVG SEWE GMVG
Sbjct: 430 DPDLQGAASKVATILREKGQTVDLVLENKPLKWVFKRATRINARRLILVGSSEWERGMVG 489
Query: 1514 VKNLATGEQYDVKLDQLE 1567
VK+L++GEQ DVKLD+L+
Sbjct: 490 VKDLSSGEQRDVKLDELD 507
>ref|XP_004156273.1| PREDICTED: histidine--tRNA ligase-like [Cucumis sativus]
Length = 507
Score = 692 bits (1787), Expect = 0.0
Identities = 339/438 (77%), Positives = 382/438 (87%)
Frame = +2
Query: 254 GGRSGSFSQPPVFETREKIDVNPPKGTRDFAPEDMRLRTWLFQNFREVSRLFGFEEVDFP 433
GGRSG+ S P E ++IDVNPPKGTRDF PEDMRLR WLF NFREVSR++GFEEVD+P
Sbjct: 70 GGRSGALSPAPTTEELQRIDVNPPKGTRDFPPEDMRLRNWLFNNFREVSRVYGFEEVDYP 129
Query: 434 VLESEALFIRKAGEEIRDQLYCFEDRGNRRVALRPELTPSLARMVIQKGKSVPLPLKWFA 613
VLESEALFIRKAGEEIRDQLYCFEDRGNRRVALRPELTPSLAR+VIQKGKS+ LP+KWFA
Sbjct: 130 VLESEALFIRKAGEEIRDQLYCFEDRGNRRVALRPELTPSLARLVIQKGKSLSLPIKWFA 189
Query: 614 IGQCWXXXXXXXXXXXEHYQWNMDIIGVPEVTAEAELISSIVTFFKRLGITSSDVGFRVS 793
IGQCW EHYQWNMDI+GVP VTAEAEL+SSIVTFFK++GIT+SDVGF+VS
Sbjct: 190 IGQCWRYERMTRGRRREHYQWNMDILGVPGVTAEAELLSSIVTFFKKVGITASDVGFKVS 249
Query: 794 SRKVLQEVLRGYSVPENLFSKVCIIIDKMEKIPRDDIKRDLKTAGVSEEAIEELLQVLSI 973
SRKVLQ+VL+ Y +P+N+F KVCIIID +EKIP D++K++LK GVSE+AIEELLQVLS+
Sbjct: 250 SRKVLQDVLKCYGIPQNMFGKVCIIIDNIEKIPLDEMKKELKVVGVSEDAIEELLQVLSV 309
Query: 974 KSLSKLEEILGASGDAVSELKTLFSLADKFGYSDWIQFDASVVRGLAYYTGIVFEGFDRE 1153
KSL+KLEE+LG G+A+S+LK LFSLA+KFGYSDWIQFDAS+VRGLAYYTGIVFEGFDR
Sbjct: 310 KSLTKLEEVLGGGGEALSDLKQLFSLAEKFGYSDWIQFDASIVRGLAYYTGIVFEGFDRG 369
Query: 1154 GKLRAICGGGRYDRLLSTFGGDDIPACGFGFGDAVIVXXXXXXXXXXXXXXXVENIVCSL 1333
GKLRAICGGGRYDRLLSTFGGDDIPACGFGFGDAVIV VENIVC+L
Sbjct: 370 GKLRAICGGGRYDRLLSTFGGDDIPACGFGFGDAVIVELLKEKKLLPELNAEVENIVCAL 429
Query: 1334 DQDLQGEASMVATVLRQKGQSVDLVLENKPLKWVFKRATRINADRLILVGKSEWENGMVG 1513
D DLQG AS VAT+LR+KGQ+VDLVLENKPLKWVFKRATRINA RLILVG SEWE GMVG
Sbjct: 430 DPDLQGAASKVATILREKGQTVDLVLENKPLKWVFKRATRINARRLILVGSSEWERGMVG 489
Query: 1514 VKNLATGEQYDVKLDQLE 1567
VK+L++GEQ DVKLD+L+
Sbjct: 490 VKDLSSGEQRDVKLDELD 507
>ref|XP_002871031.1| histidyl-tRNA synthetase 1 [Arabidopsis lyrata subsp. lyrata]
gi|297316868|gb|EFH47290.1| histidyl-tRNA synthetase 1
[Arabidopsis lyrata subsp. lyrata]
Length = 486
Score = 671 bits (1731), Expect = 0.0
Identities = 334/438 (76%), Positives = 378/438 (86%), Gaps = 1/438 (0%)
Frame = +2
Query: 257 GRSGSFSQPPVF-ETREKIDVNPPKGTRDFAPEDMRLRTWLFQNFREVSRLFGFEEVDFP 433
GRSGS P V E +KIDVNPPKGTRDF PEDMRLR WLF +F+EVSRLFG+EEVDFP
Sbjct: 49 GRSGSIVAPLVVNEDFQKIDVNPPKGTRDFPPEDMRLRNWLFNHFKEVSRLFGYEEVDFP 108
Query: 434 VLESEALFIRKAGEEIRDQLYCFEDRGNRRVALRPELTPSLARMVIQKGKSVPLPLKWFA 613
VLE+EALFIRKAGEEIRDQLYCFEDRGNRRVALRPELTPSLAR+VIQKGKSV LPLKWFA
Sbjct: 109 VLETEALFIRKAGEEIRDQLYCFEDRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFA 168
Query: 614 IGQCWXXXXXXXXXXXEHYQWNMDIIGVPEVTAEAELISSIVTFFKRLGITSSDVGFRVS 793
+GQCW EHYQWNMDIIGVPEVTAEAELISSIVTFFKR+GIT+SDVGF+VS
Sbjct: 169 VGQCWRYERMTRGRRREHYQWNMDIIGVPEVTAEAELISSIVTFFKRIGITASDVGFKVS 228
Query: 794 SRKVLQEVLRGYSVPENLFSKVCIIIDKMEKIPRDDIKRDLKTAGVSEEAIEELLQVLSI 973
SRKVLQE+L+ Y VPE+LF +VCIIIDK+EKIP D+IK++L GVSE+AIE+LLQVLS+
Sbjct: 229 SRKVLQELLKKYGVPEDLFGRVCIIIDKIEKIPIDEIKKELGFTGVSEDAIEQLLQVLSV 288
Query: 974 KSLSKLEEILGASGDAVSELKTLFSLADKFGYSDWIQFDASVVRGLAYYTGIVFEGFDRE 1153
KSL LE+ILG +G+A+++LK LFSLA+KFGYS+WIQFDASVVRGLAYYTGIVFEGFDR+
Sbjct: 289 KSLDDLEDILGGAGEAIADLKQLFSLAEKFGYSEWIQFDASVVRGLAYYTGIVFEGFDRK 348
Query: 1154 GKLRAICGGGRYDRLLSTFGGDDIPACGFGFGDAVIVXXXXXXXXXXXXXXXVENIVCSL 1333
GKLRAICGGGRYDRLLST+GGDDIPACGFGFGDAVIV VENIVC+L
Sbjct: 349 GKLRAICGGGRYDRLLSTYGGDDIPACGFGFGDAVIVELLKEKDLLPELGQEVENIVCAL 408
Query: 1334 DQDLQGEASMVATVLRQKGQSVDLVLENKPLKWVFKRATRINADRLILVGKSEWENGMVG 1513
D+DLQG A+ VAT LR KGQ+VDLVLE+KPLKWVFKRA R+NA RL+LVGK+EWE+G V
Sbjct: 409 DKDLQGAAATVATTLRDKGQTVDLVLESKPLKWVFKRAARVNARRLVLVGKTEWEDGSVS 468
Query: 1514 VKNLATGEQYDVKLDQLE 1567
VK L++GEQ+ VKL+ LE
Sbjct: 469 VKVLSSGEQFQVKLNDLE 486