BLASTX nr result

ID: Coptis21_contig00008498 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00008498
         (1017 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270104.1| PREDICTED: short-chain dehydrogenase TIC 32,...   475   e-132
ref|XP_002509816.1| short-chain dehydrogenase, putative [Ricinus...   468   e-130
gb|ACU23411.1| unknown [Glycine max]                                  461   e-127
ref|XP_002274932.1| PREDICTED: short-chain dehydrogenase TIC 32,...   461   e-127
ref|XP_003525392.1| PREDICTED: WW domain-containing oxidoreducta...   460   e-127

>ref|XP_002270104.1| PREDICTED: short-chain dehydrogenase TIC 32, chloroplastic [Vitis
           vinifera] gi|302143828|emb|CBI22689.3| unnamed protein
           product [Vitis vinifera]
          Length = 313

 Score =  475 bits (1223), Expect = e-132
 Identities = 238/312 (76%), Positives = 270/312 (86%)
 Frame = +3

Query: 51  MWFFNKKGPSGFSTSSTAEEVTHGIDGTGLTAIVTGASSGIGAETTRVLSLRGVHVVMAV 230
           MW+F++KGPSGFS SSTAEEVT GIDGTGLTAIVTGASSGIG ETTRVL+LRGVHVVM V
Sbjct: 1   MWWFSRKGPSGFSASSTAEEVTQGIDGTGLTAIVTGASSGIGTETTRVLALRGVHVVMGV 60

Query: 231 RNMDAGNKVKEAIVKENPGAKVDVMELDLSSMASVKKFASEYTFAGLPLNILINNAGIML 410
           RNM AG +VKEAIVKE P AKVD MELDLSSMASV+KFASEY  +GLPLNILINNAGIM 
Sbjct: 61  RNMSAGKEVKEAIVKEIPTAKVDAMELDLSSMASVRKFASEYNSSGLPLNILINNAGIMA 120

Query: 411 TPFMLSKDNIELQFATNYIGHFLLTNLLLETMKKTAQENHIEGRILNLSSEGHRYQRREG 590
            P+MLSKDNIE+QFATN++GHFLLTNLLL+TMKKT +++  EGRI+N+SS  HRY  REG
Sbjct: 121 VPYMLSKDNIEMQFATNHLGHFLLTNLLLDTMKKTTRKSRKEGRIVNVSSMAHRYPYREG 180

Query: 591 IQFDKINDKARYNSLYAYNESKLANVLHANELARRLKEDGVQITANSLHPGVITTDLLRH 770
           I+FDKINDK+ Y+SL+AY +SKLANVLHANELARR KEDGV ITANSLHPG I T+L R 
Sbjct: 181 IRFDKINDKSGYSSLFAYGQSKLANVLHANELARRFKEDGVDITANSLHPGAIVTNLFRC 240

Query: 771 HTIINGIFKTVAKYFVKNVQQGAATTCYVALHPQVKGVSGEYFLDSNKGKPLEQAKDMEL 950
            +I++G+  TV K  +KNVQQGAATTCYVALHPQVKGVSG+YF D N  KP  QAKD EL
Sbjct: 241 SSIVSGLVNTVGKLVLKNVQQGAATTCYVALHPQVKGVSGQYFSDCNIAKPSSQAKDPEL 300

Query: 951 AEKLWDFSMGLI 986
           A+KLW+FSM L+
Sbjct: 301 AKKLWEFSMNLV 312


>ref|XP_002509816.1| short-chain dehydrogenase, putative [Ricinus communis]
           gi|223549715|gb|EEF51203.1| short-chain dehydrogenase,
           putative [Ricinus communis]
          Length = 315

 Score =  468 bits (1205), Expect = e-130
 Identities = 231/313 (73%), Positives = 269/313 (85%)
 Frame = +3

Query: 51  MWFFNKKGPSGFSTSSTAEEVTHGIDGTGLTAIVTGASSGIGAETTRVLSLRGVHVVMAV 230
           MW F  KGPSGFS +STAE+VT GIDGTGLTAIVTGASSGIG ET RVL+LR VHVVMAV
Sbjct: 1   MWIFGWKGPSGFSANSTAEQVTQGIDGTGLTAIVTGASSGIGVETARVLALRDVHVVMAV 60

Query: 231 RNMDAGNKVKEAIVKENPGAKVDVMELDLSSMASVKKFASEYTFAGLPLNILINNAGIML 410
           RN+DAG  VKE+I+KE P AK+DVM+ DLSSMASV+KFASEY  +GLPLN+LINNAG+M 
Sbjct: 61  RNVDAGRNVKESILKEIPTAKIDVMQFDLSSMASVRKFASEYISSGLPLNLLINNAGVMA 120

Query: 411 TPFMLSKDNIELQFATNYIGHFLLTNLLLETMKKTAQENHIEGRILNLSSEGHRYQRREG 590
           TPFMLS+DNIE QFATN++GHFLLT+LLLETMK TA+E+  EGRI+N+SS GHR+  REG
Sbjct: 121 TPFMLSQDNIERQFATNHVGHFLLTDLLLETMKNTARESSREGRIVNVSSAGHRFTYREG 180

Query: 591 IQFDKINDKARYNSLYAYNESKLANVLHANELARRLKEDGVQITANSLHPGVITTDLLRH 770
           I+FDK+ND+A YNS+ AY +SKLAN+LHA ELARRLKEDGV I+ NSLHPG I T+LLR+
Sbjct: 181 IRFDKLNDEAGYNSILAYGQSKLANILHAGELARRLKEDGVDISVNSLHPGAIDTNLLRY 240

Query: 771 HTIINGIFKTVAKYFVKNVQQGAATTCYVALHPQVKGVSGEYFLDSNKGKPLEQAKDMEL 950
           H++INGI   VAKY +KNVQQGAATTCYVALHPQVKGV+GEYF DSN   P  QAKD +L
Sbjct: 241 HSVINGIVSLVAKYVIKNVQQGAATTCYVALHPQVKGVTGEYFSDSNIATPTSQAKDADL 300

Query: 951 AEKLWDFSMGLIN 989
           A++LWDFS+ L N
Sbjct: 301 AKRLWDFSVRLTN 313


>gb|ACU23411.1| unknown [Glycine max]
          Length = 315

 Score =  461 bits (1187), Expect = e-127
 Identities = 228/313 (72%), Positives = 266/313 (84%)
 Frame = +3

Query: 51  MWFFNKKGPSGFSTSSTAEEVTHGIDGTGLTAIVTGASSGIGAETTRVLSLRGVHVVMAV 230
           MWF   KG SGFS SSTAE+VT GIDGT LTAIVTGA+SG+G ETTRVL+LRGVHVVMAV
Sbjct: 1   MWFLGWKGASGFSASSTAEQVTQGIDGTALTAIVTGATSGLGLETTRVLALRGVHVVMAV 60

Query: 231 RNMDAGNKVKEAIVKENPGAKVDVMELDLSSMASVKKFASEYTFAGLPLNILINNAGIML 410
           R++D+G  VKE I+KE P AK+DVMELDLSSMASV+KFA+++  +GLPLNILINNAG+M 
Sbjct: 61  RSLDSGKNVKETILKEIPSAKIDVMELDLSSMASVRKFAADFNSSGLPLNILINNAGVMA 120

Query: 411 TPFMLSKDNIELQFATNYIGHFLLTNLLLETMKKTAQENHIEGRILNLSSEGHRYQRREG 590
           TPF LS+DNIELQFATN++GHFLLTNLLLETMKKT    + EGRI+ LSSE HR+  REG
Sbjct: 121 TPFTLSQDNIELQFATNHLGHFLLTNLLLETMKKTVGVCNQEGRIVILSSEAHRFAYREG 180

Query: 591 IQFDKINDKARYNSLYAYNESKLANVLHANELARRLKEDGVQITANSLHPGVITTDLLRH 770
           IQFDKIND++ Y+S +AY +SKLAN+LHANELARRLKE+GV+IT NSLHPG I T++LR+
Sbjct: 181 IQFDKINDESGYSSYFAYGQSKLANILHANELARRLKEEGVEITVNSLHPGSIITNILRY 240

Query: 771 HTIINGIFKTVAKYFVKNVQQGAATTCYVALHPQVKGVSGEYFLDSNKGKPLEQAKDMEL 950
           H  IN +   V KYF+KNVQQGAAT CYVALHPQVKG+SGEYF+DSNKG P   AKD EL
Sbjct: 241 HDYINALANMVGKYFLKNVQQGAATQCYVALHPQVKGISGEYFMDSNKGNPASLAKDSEL 300

Query: 951 AEKLWDFSMGLIN 989
           AEKLW+FS+ L N
Sbjct: 301 AEKLWEFSLSLTN 313


>ref|XP_002274932.1| PREDICTED: short-chain dehydrogenase TIC 32, chloroplastic isoform
           1 [Vitis vinifera] gi|297742509|emb|CBI34658.3| unnamed
           protein product [Vitis vinifera]
          Length = 315

 Score =  461 bits (1185), Expect = e-127
 Identities = 225/311 (72%), Positives = 264/311 (84%)
 Frame = +3

Query: 51  MWFFNKKGPSGFSTSSTAEEVTHGIDGTGLTAIVTGASSGIGAETTRVLSLRGVHVVMAV 230
           MW F +KGPSGFS  STAEEV  GIDG GLTA+VTGASSGIG ET+RVL+L GVHV+MAV
Sbjct: 1   MWIFGRKGPSGFSACSTAEEVAQGIDGNGLTAVVTGASSGIGTETSRVLALHGVHVIMAV 60

Query: 231 RNMDAGNKVKEAIVKENPGAKVDVMELDLSSMASVKKFASEYTFAGLPLNILINNAGIML 410
           RN+DAG  VKE I+KE P AKVDVMELDLSS+ SV+KFASEY   GLPLN+LINNAG+M 
Sbjct: 61  RNVDAGRNVKETILKEIPTAKVDVMELDLSSLPSVRKFASEYKSLGLPLNLLINNAGVMA 120

Query: 411 TPFMLSKDNIELQFATNYIGHFLLTNLLLETMKKTAQENHIEGRILNLSSEGHRYQRREG 590
           TPF+LS DNIELQFATN++GHFLLTNLLLETMK TA+E+  EGRI+N+SSEGHR+   EG
Sbjct: 121 TPFLLSHDNIELQFATNHLGHFLLTNLLLETMKNTARESGREGRIVNVSSEGHRFPYSEG 180

Query: 591 IQFDKINDKARYNSLYAYNESKLANVLHANELARRLKEDGVQITANSLHPGVITTDLLRH 770
           I FDKIND++ YNS+YAY +SKLAN+LHANELA+RL+E+GV+ITANSLHPG I T+LLR+
Sbjct: 181 ICFDKINDESAYNSVYAYGQSKLANILHANELAKRLQEEGVEITANSLHPGAIATNLLRY 240

Query: 771 HTIINGIFKTVAKYFVKNVQQGAATTCYVALHPQVKGVSGEYFLDSNKGKPLEQAKDMEL 950
           H+ ++GI   V KY +KN+ QGAATTCYVALHPQVKGVSGEYF DSN  KP  + KD EL
Sbjct: 241 HSFLDGIVNMVGKYVLKNIPQGAATTCYVALHPQVKGVSGEYFADSNIAKPSSKGKDAEL 300

Query: 951 AEKLWDFSMGL 983
            +KLW+FS+ L
Sbjct: 301 GKKLWEFSISL 311


>ref|XP_003525392.1| PREDICTED: WW domain-containing oxidoreductase-like isoform 1
           [Glycine max]
          Length = 315

 Score =  460 bits (1183), Expect = e-127
 Identities = 227/313 (72%), Positives = 266/313 (84%)
 Frame = +3

Query: 51  MWFFNKKGPSGFSTSSTAEEVTHGIDGTGLTAIVTGASSGIGAETTRVLSLRGVHVVMAV 230
           MWF   KG SGFS SSTAE+VT GIDGT LTAIVTGA+SG+G ETTRVL+LRGVHVVMAV
Sbjct: 1   MWFLGWKGASGFSASSTAEQVTQGIDGTALTAIVTGATSGLGLETTRVLALRGVHVVMAV 60

Query: 231 RNMDAGNKVKEAIVKENPGAKVDVMELDLSSMASVKKFASEYTFAGLPLNILINNAGIML 410
           R++D+G  VKE I+KE P AK+DVMELDLSSMASV+KFA+++  +GLPLNILINNAG+M 
Sbjct: 61  RSLDSGKNVKETILKEIPSAKIDVMELDLSSMASVRKFAADFNSSGLPLNILINNAGVMA 120

Query: 411 TPFMLSKDNIELQFATNYIGHFLLTNLLLETMKKTAQENHIEGRILNLSSEGHRYQRREG 590
           TPF LS+DNIELQFATN++GHFLLTNLLLETMKKT    + EGRI+ LSSE HR+  REG
Sbjct: 121 TPFTLSQDNIELQFATNHLGHFLLTNLLLETMKKTVGVCNQEGRIVILSSEAHRFAYREG 180

Query: 591 IQFDKINDKARYNSLYAYNESKLANVLHANELARRLKEDGVQITANSLHPGVITTDLLRH 770
           IQFDKIND++ Y+S +AY +SKLAN+LHANELARRLKE+GV+IT NSLHPG I T++LR+
Sbjct: 181 IQFDKINDESGYSSYFAYGQSKLANILHANELARRLKEEGVEITVNSLHPGSIITNILRY 240

Query: 771 HTIINGIFKTVAKYFVKNVQQGAATTCYVALHPQVKGVSGEYFLDSNKGKPLEQAKDMEL 950
           H  IN +   V KYF+KNVQQGAAT CYVALHPQVKG+SGEYF+DSNKG P   AKD EL
Sbjct: 241 HDYINALANMVGKYFLKNVQQGAATQCYVALHPQVKGISGEYFMDSNKGNPASLAKDSEL 300

Query: 951 AEKLWDFSMGLIN 989
           A+KLW+FS+ L N
Sbjct: 301 AKKLWEFSLSLTN 313


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