BLASTX nr result

ID: Coptis21_contig00008497 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00008497
         (1262 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270104.1| PREDICTED: short-chain dehydrogenase TIC 32,...   469   e-130
ref|XP_002272242.2| PREDICTED: short-chain dehydrogenase TIC 32,...   466   e-129
ref|XP_002513680.1| short-chain dehydrogenase, putative [Ricinus...   465   e-129
gb|ABK96367.1| unknown [Populus trichocarpa x Populus deltoides]      463   e-128
ref|XP_003525392.1| PREDICTED: WW domain-containing oxidoreducta...   462   e-128

>ref|XP_002270104.1| PREDICTED: short-chain dehydrogenase TIC 32, chloroplastic [Vitis
           vinifera] gi|302143828|emb|CBI22689.3| unnamed protein
           product [Vitis vinifera]
          Length = 313

 Score =  469 bits (1208), Expect = e-130
 Identities = 237/311 (76%), Positives = 271/311 (87%)
 Frame = +3

Query: 66  FFFNKIGASGFSSSSTALEVTQGVDGTNLTAIVTGASSGIGAETARVLSLRGVHVVMAVR 245
           ++F++ G SGFS+SSTA EVTQG+DGT LTAIVTGASSGIG ET RVL+LRGVHVVM VR
Sbjct: 2   WWFSRKGPSGFSASSTAEEVTQGIDGTGLTAIVTGASSGIGTETTRVLALRGVHVVMGVR 61

Query: 246 NMDAGNKVKEAIVKENPGAKVDVMELDLSSMASVKKFASEFTSAGLPLNILINNAGVMAP 425
           NM AG +VKEAIVKE P AKVD MELDLSSMASV+KFASE+ S+GLPLNILINNAG+MA 
Sbjct: 62  NMSAGKEVKEAIVKEIPTAKVDAMELDLSSMASVRKFASEYNSSGLPLNILINNAGIMAV 121

Query: 426 PFMLSQDNIEMQFATNHIGHFLLTNLLLETMKNTAEKNNIEGRIVNVSSEAHRMTYREGI 605
           P+MLS+DNIEMQFATNH+GHFLLTNLLL+TMK T  K+  EGRIVNVSS AHR  YREGI
Sbjct: 122 PYMLSKDNIEMQFATNHLGHFLLTNLLLDTMKKTTRKSRKEGRIVNVSSMAHRYPYREGI 181

Query: 606 QFDKINEKSGYNSLYAYGQSKLANVLHANELVRRLKEDGVQITANSLHPGSINTDLLRHH 785
           +FDKIN+KSGY+SL+AYGQSKLANVLHANEL RR KEDGV ITANSLHPG+I T+L R  
Sbjct: 182 RFDKINDKSGYSSLFAYGQSKLANVLHANELARRFKEDGVDITANSLHPGAIVTNLFRCS 241

Query: 786 SIINGIVQAVGKFFIKDVPQGAATTCYVALHPQVKGVSGEYFLDSNIGKASTLARDTELA 965
           SI++G+V  VGK  +K+V QGAATTCYVALHPQVKGVSG+YF D NI K S+ A+D ELA
Sbjct: 242 SIVSGLVNTVGKLVLKNVQQGAATTCYVALHPQVKGVSGQYFSDCNIAKPSSQAKDPELA 301

Query: 966 KKLWDFSMSLI 998
           KKLW+FSM+L+
Sbjct: 302 KKLWEFSMNLV 312


>ref|XP_002272242.2| PREDICTED: short-chain dehydrogenase TIC 32, chloroplastic-like
           [Vitis vinifera] gi|147792549|emb|CAN65620.1|
           hypothetical protein VITISV_040852 [Vitis vinifera]
           gi|302143827|emb|CBI22688.3| unnamed protein product
           [Vitis vinifera]
          Length = 313

 Score =  466 bits (1199), Expect = e-129
 Identities = 233/311 (74%), Positives = 268/311 (86%)
 Frame = +3

Query: 66  FFFNKIGASGFSSSSTALEVTQGVDGTNLTAIVTGASSGIGAETARVLSLRGVHVVMAVR 245
           ++F + GASGFS+SSTA+EVT G+DGT LTAIVTGASSGIG ETARVL+LRGVHVVMAVR
Sbjct: 2   WWFGRNGASGFSASSTAVEVTHGIDGTGLTAIVTGASSGIGTETARVLALRGVHVVMAVR 61

Query: 246 NMDAGNKVKEAIVKENPGAKVDVMELDLSSMASVKKFASEFTSAGLPLNILINNAGVMAP 425
           NM AG +VKEAI KE P AK+D MELDLSSMASV+KFASEF+S+GLPLN+LINNAG+MA 
Sbjct: 62  NMAAGREVKEAIAKEIPTAKIDAMELDLSSMASVRKFASEFSSSGLPLNLLINNAGLMAT 121

Query: 426 PFMLSQDNIEMQFATNHIGHFLLTNLLLETMKNTAEKNNIEGRIVNVSSEAHRMTYREGI 605
           PFMLS+DNIE+QFATNHIGHFLLTNLLLETMK TA ++N EGRIVNVSS  HR +Y EGI
Sbjct: 122 PFMLSKDNIELQFATNHIGHFLLTNLLLETMKKTARESNKEGRIVNVSSRRHRFSYHEGI 181

Query: 606 QFDKINEKSGYNSLYAYGQSKLANVLHANELVRRLKEDGVQITANSLHPGSINTDLLRHH 785
           +FD IN++SGYN L AYGQSKLANVLHANEL RRLK+DG  ITANSLHPG+I T+L RH 
Sbjct: 182 RFDMINDQSGYNRLSAYGQSKLANVLHANELSRRLKDDGANITANSLHPGAIATNLFRHV 241

Query: 786 SIINGIVQAVGKFFIKDVPQGAATTCYVALHPQVKGVSGEYFLDSNIGKASTLARDTELA 965
            ++ G +   GK+ +K+V QGAATTCYVALHP+VKG +GEYF DSNI K S+ A D ELA
Sbjct: 242 PLVGGFIDIFGKYVVKNVQQGAATTCYVALHPEVKGTTGEYFADSNIAKGSSQANDPELA 301

Query: 966 KKLWDFSMSLI 998
           KKLWDFS+SLI
Sbjct: 302 KKLWDFSLSLI 312


>ref|XP_002513680.1| short-chain dehydrogenase, putative [Ricinus communis]
            gi|223547588|gb|EEF49083.1| short-chain dehydrogenase,
            putative [Ricinus communis]
          Length = 313

 Score =  465 bits (1197), Expect = e-129
 Identities = 234/312 (75%), Positives = 268/312 (85%)
 Frame = +3

Query: 66   FFFNKIGASGFSSSSTALEVTQGVDGTNLTAIVTGASSGIGAETARVLSLRGVHVVMAVR 245
            + F+K   SGFSSSSTA +VTQG+DG+ LTAIVTGASSGIG ET RVL+  GVHVVMAVR
Sbjct: 2    WLFSKKSPSGFSSSSTAEQVTQGIDGSGLTAIVTGASSGIGTETTRVLASCGVHVVMAVR 61

Query: 246  NMDAGNKVKEAIVKENPGAKVDVMELDLSSMASVKKFASEFTSAGLPLNILINNAGVMAP 425
            N+ +G  VKE I+KE P AKVD MELDLSSMASV+KFAS+F S+GLPLNILINNAGVMA 
Sbjct: 62   NLVSGRNVKETIIKEIPTAKVDAMELDLSSMASVRKFASDFNSSGLPLNILINNAGVMAT 121

Query: 426  PFMLSQDNIEMQFATNHIGHFLLTNLLLETMKNTAEKNNIEGRIVNVSSEAHRMTYREGI 605
            PFMLS+DNIE+QFATNH+GHFLLTNLLL+TMK TA ++N EGRIVNVSSEAHR +Y EGI
Sbjct: 122  PFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTAHQSNREGRIVNVSSEAHRYSYHEGI 181

Query: 606  QFDKINEKSGYNSLYAYGQSKLANVLHANELVRRLKEDGVQITANSLHPGSINTDLLRHH 785
            +FDKIN++SGY+S  AYGQSKLANVLHANEL RRLKEDGV ITANSLHPG+I T+L RH 
Sbjct: 182  RFDKINDRSGYSSFRAYGQSKLANVLHANELTRRLKEDGVNITANSLHPGAIVTNLFRHM 241

Query: 786  SIINGIVQAVGKFFIKDVPQGAATTCYVALHPQVKGVSGEYFLDSNIGKASTLARDTELA 965
            +IING+V  +GK  +K+V QGAATTCYVA+HPQVKG+SGEYF DSN+ KAS   RD EL 
Sbjct: 242  NIINGMVNVLGKLVLKNVQQGAATTCYVAMHPQVKGISGEYFSDSNLAKASAHGRDVELG 301

Query: 966  KKLWDFSMSLIS 1001
            KKLWDFSM L+S
Sbjct: 302  KKLWDFSMKLVS 313


>gb|ABK96367.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 315

 Score =  463 bits (1191), Expect = e-128
 Identities = 232/304 (76%), Positives = 267/304 (87%)
 Frame = +3

Query: 84  GASGFSSSSTALEVTQGVDGTNLTAIVTGASSGIGAETARVLSLRGVHVVMAVRNMDAGN 263
           G SGFS  STA +VTQG+D T LTAIVTGASSGIG ET RVL+LR  HVVMAVRN+++G 
Sbjct: 8   GPSGFSPRSTAEQVTQGIDATGLTAIVTGASSGIGTETTRVLALRCAHVVMAVRNVESGR 67

Query: 264 KVKEAIVKENPGAKVDVMELDLSSMASVKKFASEFTSAGLPLNILINNAGVMAPPFMLSQ 443
           KVKE I+KE P AK+DVM LDL+SM SV+KFASEF S GLPLN+LINNAG+MA PFMLSQ
Sbjct: 68  KVKEEILKEFPTAKIDVMHLDLNSMESVRKFASEFISLGLPLNLLINNAGIMAAPFMLSQ 127

Query: 444 DNIEMQFATNHIGHFLLTNLLLETMKNTAEKNNIEGRIVNVSSEAHRMTYREGIQFDKIN 623
           DNIEMQFATNH+GHFLLT+L+L+TMK TA ++N EGRIV VSSEAHR  Y EGI+FDKIN
Sbjct: 128 DNIEMQFATNHVGHFLLTDLVLDTMKTTALESNREGRIVIVSSEAHRFAYSEGIRFDKIN 187

Query: 624 EKSGYNSLYAYGQSKLANVLHANELVRRLKEDGVQITANSLHPGSINTDLLRHHSIINGI 803
           ++SGYNS++AYGQSKLANVLHANEL RRLKE+GV ITANSLHPGSI T+LLR HS+IN +
Sbjct: 188 DESGYNSIWAYGQSKLANVLHANELTRRLKEEGVNITANSLHPGSIMTNLLRFHSVINSV 247

Query: 804 VQAVGKFFIKDVPQGAATTCYVALHPQVKGVSGEYFLDSNIGKASTLARDTELAKKLWDF 983
           V  VG+F +K+V QGAATTCYVALHPQVKGVSGEYF+DSN+ KAS+LA+D ELAKKLWDF
Sbjct: 248 VTMVGRFALKNVQQGAATTCYVALHPQVKGVSGEYFMDSNLSKASSLAKDEELAKKLWDF 307

Query: 984 SMSL 995
           S+SL
Sbjct: 308 SLSL 311


>ref|XP_003525392.1| PREDICTED: WW domain-containing oxidoreductase-like isoform 1
           [Glycine max]
          Length = 315

 Score =  462 bits (1189), Expect = e-128
 Identities = 229/310 (73%), Positives = 270/310 (87%)
 Frame = +3

Query: 66  FFFNKIGASGFSSSSTALEVTQGVDGTNLTAIVTGASSGIGAETARVLSLRGVHVVMAVR 245
           +F    GASGFS+SSTA +VTQG+DGT LTAIVTGA+SG+G ET RVL+LRGVHVVMAVR
Sbjct: 2   WFLGWKGASGFSASSTAEQVTQGIDGTALTAIVTGATSGLGLETTRVLALRGVHVVMAVR 61

Query: 246 NMDAGNKVKEAIVKENPGAKVDVMELDLSSMASVKKFASEFTSAGLPLNILINNAGVMAP 425
           ++D+G  VKE I+KE P AK+DVMELDLSSMASV+KFA++F S+GLPLNILINNAGVMA 
Sbjct: 62  SLDSGKNVKETILKEIPSAKIDVMELDLSSMASVRKFAADFNSSGLPLNILINNAGVMAT 121

Query: 426 PFMLSQDNIEMQFATNHIGHFLLTNLLLETMKNTAEKNNIEGRIVNVSSEAHRMTYREGI 605
           PF LSQDNIE+QFATNH+GHFLLTNLLLETMK T    N EGRIV +SSEAHR  YREGI
Sbjct: 122 PFTLSQDNIELQFATNHLGHFLLTNLLLETMKKTVGVCNQEGRIVILSSEAHRFAYREGI 181

Query: 606 QFDKINEKSGYNSLYAYGQSKLANVLHANELVRRLKEDGVQITANSLHPGSINTDLLRHH 785
           QFDKIN++SGY+S +AYGQSKLAN+LHANEL RRLKE+GV+IT NSLHPGSI T++LR+H
Sbjct: 182 QFDKINDESGYSSYFAYGQSKLANILHANELARRLKEEGVEITVNSLHPGSIITNILRYH 241

Query: 786 SIINGIVQAVGKFFIKDVPQGAATTCYVALHPQVKGVSGEYFLDSNIGKASTLARDTELA 965
             IN +   VGK+F+K+V QGAAT CYVALHPQVKG+SGEYF+DSN G  ++LA+D+ELA
Sbjct: 242 DYINALANMVGKYFLKNVQQGAATQCYVALHPQVKGISGEYFMDSNKGNPASLAKDSELA 301

Query: 966 KKLWDFSMSL 995
           KKLW+FS+SL
Sbjct: 302 KKLWEFSLSL 311


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