BLASTX nr result

ID: Coptis21_contig00008492 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00008492
         (1132 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001242603.1| uncharacterized protein LOC100783283 [Glycin...   412   e-113
ref|XP_003624129.1| ABC transporter [Medicago truncatula] gi|355...   410   e-112
ref|XP_002886917.1| ATNAP11 [Arabidopsis lyrata subsp. lyrata] g...   410   e-112
ref|NP_564850.1| protein triGALACTOSYLDIACYLGLYCEROL 3 [Arabidop...   410   e-112
ref|XP_003534523.1| PREDICTED: protein TRIGALACTOSYLDIACYLGLYCER...   409   e-112

>ref|NP_001242603.1| uncharacterized protein LOC100783283 [Glycine max]
            gi|255638918|gb|ACU19761.1| unknown [Glycine max]
          Length = 345

 Score =  412 bits (1059), Expect = e-113
 Identities = 213/263 (80%), Positives = 233/263 (88%)
 Frame = -3

Query: 1130 ECKDIYKSFEEKEILRGVSFKIHDGEAVGIIGPSGTGKSTVLKIMAGLLTPDKGDVFIRG 951
            EC+D+YKSF EK+IL GVSFKI  GEAVGIIGPSGTGKSTVLKI+AGLL PDKG+V+IRG
Sbjct: 86   ECRDVYKSFGEKKILNGVSFKIKHGEAVGIIGPSGTGKSTVLKIIAGLLAPDKGEVYIRG 145

Query: 950  KKRHGLVSDEEIFGLRIGLVFQSASLFDSLSVRENVGFRLYEKSNMSDNEIEVSVRENLA 771
            KKR GLVSD++I GLRIGLVFQSA+LFDSL+VRENVGF LYE S+MS+++I   V E LA
Sbjct: 146  KKRVGLVSDDDISGLRIGLVFQSAALFDSLTVRENVGFLLYEHSSMSEDQISELVMETLA 205

Query: 770  AVGLKGVEDRLPSELSGGMKKRVALARSIIFDNTKEAIEPEVLLYDEPTAGLDPIASTVV 591
            AVGLKGVEDRLPSELSGGMKKRVALARSII D TKE+IEPEVLLYDEPTAGLDPIASTVV
Sbjct: 206  AVGLKGVEDRLPSELSGGMKKRVALARSIICDTTKESIEPEVLLYDEPTAGLDPIASTVV 265

Query: 590  EDLIRSVHFKXXXXXXXXXXGHNIASYVVVTHQHSTIKRAVDRLLFLHEGKVVWEGRTHE 411
            EDLIRSVH K            NI+SYVVVTHQHSTIKRA+DRLLFLH+GK+VWEG THE
Sbjct: 266  EDLIRSVHIKGQDARGKPG---NISSYVVVTHQHSTIKRAIDRLLFLHKGKIVWEGMTHE 322

Query: 410  FTTSTNPIVRQFASGSLDGPIRY 342
            FTTSTNPIV+QFASGSLDGPIRY
Sbjct: 323  FTTSTNPIVQQFASGSLDGPIRY 345


>ref|XP_003624129.1| ABC transporter [Medicago truncatula] gi|355499144|gb|AES80347.1| ABC
            transporter [Medicago truncatula]
          Length = 346

 Score =  410 bits (1055), Expect = e-112
 Identities = 209/263 (79%), Positives = 233/263 (88%)
 Frame = -3

Query: 1130 ECKDIYKSFEEKEILRGVSFKIHDGEAVGIIGPSGTGKSTVLKIMAGLLTPDKGDVFIRG 951
            EC+D+YKSF EK+IL GVSFKI  GEAVGIIGPSGTGKST+LKI+AGLL PDKG+V+IRG
Sbjct: 87   ECRDVYKSFGEKKILNGVSFKIRHGEAVGIIGPSGTGKSTILKIIAGLLAPDKGEVYIRG 146

Query: 950  KKRHGLVSDEEIFGLRIGLVFQSASLFDSLSVRENVGFRLYEKSNMSDNEIEVSVRENLA 771
            +KR GL+SD+EI GLRIGLVFQSA+LFDSL+VRENVGF LYE S+M + EI   V+E LA
Sbjct: 147  RKRDGLISDDEISGLRIGLVFQSAALFDSLTVRENVGFLLYEHSSMPEEEISELVKETLA 206

Query: 770  AVGLKGVEDRLPSELSGGMKKRVALARSIIFDNTKEAIEPEVLLYDEPTAGLDPIASTVV 591
            AVGLKGVE+RLPSELSGGMKKRVALARSIIFD TK++IEPEVLLYDEPTAGLDPIASTVV
Sbjct: 207  AVGLKGVENRLPSELSGGMKKRVALARSIIFDTTKDSIEPEVLLYDEPTAGLDPIASTVV 266

Query: 590  EDLIRSVHFKXXXXXXXXXXGHNIASYVVVTHQHSTIKRAVDRLLFLHEGKVVWEGRTHE 411
            EDLIRSVH K            NI+SYVVVTHQHSTIKRA+DRLLFLH+GK+VWEG THE
Sbjct: 267  EDLIRSVHIKGRDALGKPG---NISSYVVVTHQHSTIKRAIDRLLFLHKGKLVWEGMTHE 323

Query: 410  FTTSTNPIVRQFASGSLDGPIRY 342
            FTTSTNPIV+QFASGSLDGPI+Y
Sbjct: 324  FTTSTNPIVQQFASGSLDGPIKY 346


>ref|XP_002886917.1| ATNAP11 [Arabidopsis lyrata subsp. lyrata]
            gi|297332758|gb|EFH63176.1| ATNAP11 [Arabidopsis lyrata
            subsp. lyrata]
          Length = 338

 Score =  410 bits (1053), Expect = e-112
 Identities = 209/263 (79%), Positives = 231/263 (87%)
 Frame = -3

Query: 1130 ECKDIYKSFEEKEILRGVSFKIHDGEAVGIIGPSGTGKSTVLKIMAGLLTPDKGDVFIRG 951
            EC+D+YKSF EK IL+GVSFKI  GEAVG+IGPSGTGKST+LKIMAGLL PDKG+V+IRG
Sbjct: 79   ECRDVYKSFGEKHILKGVSFKIRHGEAVGVIGPSGTGKSTILKIMAGLLAPDKGEVYIRG 138

Query: 950  KKRHGLVSDEEIFGLRIGLVFQSASLFDSLSVRENVGFRLYEKSNMSDNEIEVSVRENLA 771
            KKR GL+SDEEI GLRIGLVFQSA+LFDSLSVRENVGF LYE+S MS+N+I   V + LA
Sbjct: 139  KKRAGLISDEEISGLRIGLVFQSAALFDSLSVRENVGFLLYERSKMSENQISELVTQTLA 198

Query: 770  AVGLKGVEDRLPSELSGGMKKRVALARSIIFDNTKEAIEPEVLLYDEPTAGLDPIASTVV 591
            AVGLKGVE+RLPSELSGGMKKRVALARS+IFD TKE IEPEVLLYDEPTAGLDPIASTVV
Sbjct: 199  AVGLKGVENRLPSELSGGMKKRVALARSLIFDTTKEVIEPEVLLYDEPTAGLDPIASTVV 258

Query: 590  EDLIRSVHFKXXXXXXXXXXGHNIASYVVVTHQHSTIKRAVDRLLFLHEGKVVWEGRTHE 411
            EDLIRSVH               IASY+VVTHQHSTI+RAVDRLLFL+EGK+VW+G THE
Sbjct: 259  EDLIRSVHMTDEDAVGKPG---KIASYLVVTHQHSTIQRAVDRLLFLYEGKIVWQGMTHE 315

Query: 410  FTTSTNPIVRQFASGSLDGPIRY 342
            FTTSTNPIV+QFA+GSLDGPIRY
Sbjct: 316  FTTSTNPIVQQFATGSLDGPIRY 338


>ref|NP_564850.1| protein triGALACTOSYLDIACYLGLYCEROL 3 [Arabidopsis thaliana]
            gi|75333028|sp|Q9AT00.1|AB13I_ARATH RecName: Full=Protein
            TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic; AltName:
            Full=ABC transporter I family member 13; Short=ABC
            transporter ABCI.13; Short=AtABCI13; AltName:
            Full=Non-intrinsic ABC protein 11; Flags: Precursor
            gi|13605495|gb|AAK32741.1|AF361573_1 At1g65410/T8F5_19
            [Arabidopsis thaliana] gi|20334770|gb|AAM16246.1|
            At1g65410/T8F5_19 [Arabidopsis thaliana]
            gi|332196249|gb|AEE34370.1| protein
            triGALACTOSYLDIACYLGLYCEROL 3 [Arabidopsis thaliana]
          Length = 345

 Score =  410 bits (1053), Expect = e-112
 Identities = 209/263 (79%), Positives = 231/263 (87%)
 Frame = -3

Query: 1130 ECKDIYKSFEEKEILRGVSFKIHDGEAVGIIGPSGTGKSTVLKIMAGLLTPDKGDVFIRG 951
            EC+D+YKSF EK IL+GVSFKI  GEAVG+IGPSGTGKST+LKIMAGLL PDKG+V+IRG
Sbjct: 86   ECRDVYKSFGEKHILKGVSFKIRHGEAVGVIGPSGTGKSTILKIMAGLLAPDKGEVYIRG 145

Query: 950  KKRHGLVSDEEIFGLRIGLVFQSASLFDSLSVRENVGFRLYEKSNMSDNEIEVSVRENLA 771
            KKR GL+SDEEI GLRIGLVFQSA+LFDSLSVRENVGF LYE+S MS+N+I   V + LA
Sbjct: 146  KKRAGLISDEEISGLRIGLVFQSAALFDSLSVRENVGFLLYERSKMSENQISELVTQTLA 205

Query: 770  AVGLKGVEDRLPSELSGGMKKRVALARSIIFDNTKEAIEPEVLLYDEPTAGLDPIASTVV 591
            AVGLKGVE+RLPSELSGGMKKRVALARS+IFD TKE IEPEVLLYDEPTAGLDPIASTVV
Sbjct: 206  AVGLKGVENRLPSELSGGMKKRVALARSLIFDTTKEVIEPEVLLYDEPTAGLDPIASTVV 265

Query: 590  EDLIRSVHFKXXXXXXXXXXGHNIASYVVVTHQHSTIKRAVDRLLFLHEGKVVWEGRTHE 411
            EDLIRSVH               IASY+VVTHQHSTI+RAVDRLLFL+EGK+VW+G THE
Sbjct: 266  EDLIRSVHMTDEDAVGKPG---KIASYLVVTHQHSTIQRAVDRLLFLYEGKIVWQGMTHE 322

Query: 410  FTTSTNPIVRQFASGSLDGPIRY 342
            FTTSTNPIV+QFA+GSLDGPIRY
Sbjct: 323  FTTSTNPIVQQFATGSLDGPIRY 345


>ref|XP_003534523.1| PREDICTED: protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic-like
            [Glycine max]
          Length = 345

 Score =  409 bits (1052), Expect = e-112
 Identities = 212/263 (80%), Positives = 232/263 (88%)
 Frame = -3

Query: 1130 ECKDIYKSFEEKEILRGVSFKIHDGEAVGIIGPSGTGKSTVLKIMAGLLTPDKGDVFIRG 951
            EC+D+YKSF EK+IL GVSFKI  GEAVGIIGPSGTGKSTVLKI+AGLL PDKG+V+IRG
Sbjct: 86   ECRDVYKSFGEKKILNGVSFKIRHGEAVGIIGPSGTGKSTVLKIIAGLLAPDKGEVYIRG 145

Query: 950  KKRHGLVSDEEIFGLRIGLVFQSASLFDSLSVRENVGFRLYEKSNMSDNEIEVSVRENLA 771
            KKR GLVSD++I GLRIGLVFQSA+LFDSL+VRENVGF LYE S+MS+++I   V E LA
Sbjct: 146  KKRVGLVSDDDISGLRIGLVFQSAALFDSLTVRENVGFLLYEHSSMSEDQISELVTETLA 205

Query: 770  AVGLKGVEDRLPSELSGGMKKRVALARSIIFDNTKEAIEPEVLLYDEPTAGLDPIASTVV 591
            AVGLKGVEDRLPSELSGGMKKRVALARSII D T+E+ EPEVLLYDEPTAGLDPIASTVV
Sbjct: 206  AVGLKGVEDRLPSELSGGMKKRVALARSIICDTTEESKEPEVLLYDEPTAGLDPIASTVV 265

Query: 590  EDLIRSVHFKXXXXXXXXXXGHNIASYVVVTHQHSTIKRAVDRLLFLHEGKVVWEGRTHE 411
            EDLIRSVH K            NIASYVVVTHQHSTIKRA+DRLLFLH+GK+VWEG THE
Sbjct: 266  EDLIRSVHIKGRDARGKPG---NIASYVVVTHQHSTIKRAIDRLLFLHKGKIVWEGMTHE 322

Query: 410  FTTSTNPIVRQFASGSLDGPIRY 342
            FTTSTNPIV+QFASGSLDGPIRY
Sbjct: 323  FTTSTNPIVQQFASGSLDGPIRY 345


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