BLASTX nr result

ID: Coptis21_contig00008470 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00008470
         (278 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002311066.1| predicted protein [Populus trichocarpa] gi|2...    72   6e-11
ref|XP_002330621.1| predicted protein [Populus trichocarpa] gi|2...    71   1e-10
ref|XP_002311065.1| predicted protein [Populus trichocarpa] gi|2...    71   1e-10
ref|XP_002311067.1| predicted protein [Populus trichocarpa] gi|2...    70   2e-10
ref|XP_002315328.1| predicted protein [Populus trichocarpa] gi|2...    70   2e-10

>ref|XP_002311066.1| predicted protein [Populus trichocarpa] gi|222850886|gb|EEE88433.1|
            predicted protein [Populus trichocarpa]
          Length = 1023

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 36/80 (45%), Positives = 52/80 (65%), Gaps = 2/80 (2%)
 Frame = -2

Query: 277  IVDPILLSEGDDTLGDTNTM--RISSHRRTKLLECMTAIVRIGVACSVESPSERMDIRDV 104
            ++DP+L++E ++T GD +     I +H     +EC+ AIV++GVACS E P ERM+I  V
Sbjct: 949  VLDPVLVTEAEETSGDASRRMSHIGNH-----MECLAAIVKVGVACSAEFPRERMEISSV 1003

Query: 103  SRELHAIRDTFLGTRIHGER 44
            + EL  IR   LG + HGER
Sbjct: 1004 AVELRRIRHILLGPQTHGER 1023


>ref|XP_002330621.1| predicted protein [Populus trichocarpa] gi|222872225|gb|EEF09356.1|
           predicted protein [Populus trichocarpa]
          Length = 774

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 41/82 (50%), Positives = 50/82 (60%), Gaps = 5/82 (6%)
 Frame = -2

Query: 277 IVDPILLSEGDDTLGDTNTMRISSHRRT-----KLLECMTAIVRIGVACSVESPSERMDI 113
           +V+PILL E      D      SSHR       K+LEC+ +I++IGVACSVE P ERMD+
Sbjct: 689 VVEPILLRE------DVERSIHSSHRMNHIETGKILECLISIIKIGVACSVELPRERMDM 742

Query: 112 RDVSRELHAIRDTFLGTRIHGE 47
             V  ELH IRD   GTRI G+
Sbjct: 743 SIVVAELHRIRDILSGTRIRGQ 764


>ref|XP_002311065.1| predicted protein [Populus trichocarpa] gi|222850885|gb|EEE88432.1|
            predicted protein [Populus trichocarpa]
          Length = 1032

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 35/78 (44%), Positives = 53/78 (67%), Gaps = 2/78 (2%)
 Frame = -2

Query: 277  IVDPILLSEGDDTLGD-TNTMRISSHRRT-KLLECMTAIVRIGVACSVESPSERMDIRDV 104
            I+DP L+ E ++T  D  +T    +H  T K++EC+  I+++GVAC+VESP ER+DI +V
Sbjct: 951  ILDPALVREAEETSADHASTSSARNHNGTEKIMECLVLIIKVGVACAVESPRERIDISNV 1010

Query: 103  SRELHAIRDTFLGTRIHG 50
            + EL+ IR   +GT  HG
Sbjct: 1011 ATELYRIRKILIGTGRHG 1028


>ref|XP_002311067.1| predicted protein [Populus trichocarpa] gi|222850887|gb|EEE88434.1|
            predicted protein [Populus trichocarpa]
          Length = 1025

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 35/80 (43%), Positives = 52/80 (65%), Gaps = 2/80 (2%)
 Frame = -2

Query: 277  IVDPILLSEGDDTLGDTNTM--RISSHRRTKLLECMTAIVRIGVACSVESPSERMDIRDV 104
            ++DP+L++E ++T GD +     I +H     +EC+ AIV++GVACS E P ERM+I  V
Sbjct: 951  VLDPVLVTEAEETSGDASRRMSHIGNH-----MECLAAIVKVGVACSAEFPRERMEISSV 1005

Query: 103  SRELHAIRDTFLGTRIHGER 44
            + EL  IR   LG + HG+R
Sbjct: 1006 AVELRRIRHILLGPQTHGKR 1025


>ref|XP_002315328.1| predicted protein [Populus trichocarpa] gi|222864368|gb|EEF01499.1|
           predicted protein [Populus trichocarpa]
          Length = 309

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 36/72 (50%), Positives = 51/72 (70%)
 Frame = -2

Query: 277 IVDPILLSEGDDTLGDTNTMRISSHRRTKLLECMTAIVRIGVACSVESPSERMDIRDVSR 98
           + D IL  + ++T  D +  ++S  R  K+LEC+T+I  +GVACSV+SP ERMDIR+V+ 
Sbjct: 239 VADRILFRDVEETDADASH-KMSHIRDNKILECLTSITTLGVACSVDSPRERMDIRNVAA 297

Query: 97  ELHAIRDTFLGT 62
           EL  IR +FLGT
Sbjct: 298 ELLRIRSSFLGT 309


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