BLASTX nr result

ID: Coptis21_contig00008451 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00008451
         (942 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310105.1| predicted protein [Populus trichocarpa] gi|2...   503   e-140
ref|XP_002266274.1| PREDICTED: post-GPI attachment to proteins f...   500   e-139
ref|XP_002266197.1| PREDICTED: post-GPI attachment to proteins f...   500   e-139
emb|CAN65586.1| hypothetical protein VITISV_034376 [Vitis vinifera]   500   e-139
ref|XP_002280194.1| PREDICTED: post-GPI attachment to proteins f...   492   e-137

>ref|XP_002310105.1| predicted protein [Populus trichocarpa] gi|222853008|gb|EEE90555.1|
           predicted protein [Populus trichocarpa]
          Length = 342

 Score =  503 bits (1296), Expect = e-140
 Identities = 236/325 (72%), Positives = 270/325 (83%), Gaps = 14/325 (4%)
 Frame = +2

Query: 2   TAQRKPGDSHPRYQVCVEQCKETGCV-----------KDKLAVDGPWYVQEPLYLQW--- 139
           T     GDS P Y+ CV QC+++GCV            D +++DGPWY QEPLYLQW   
Sbjct: 19  TLDASAGDSDPIYRTCVGQCEKSGCVGQRCFSHCNFSSDGVSIDGPWYKQEPLYLQWKQW 78

Query: 140 DCQSNCRYHCMLKTENEREVLGTGPVKYHGKWPFKRVLGIQEPVSVAFSLLNLAMQFHGW 319
           DCQS+CRY+CML  E ERE LG GPVKYHGKWPFKRV GIQEPVSVAFS LNLAM FHGW
Sbjct: 79  DCQSDCRYYCMLDREKEREALGHGPVKYHGKWPFKRVYGIQEPVSVAFSALNLAMHFHGW 138

Query: 320 LSFFILLYRKLPLRPQTRKPYYEYAGLWLMYGFFAMNSWVWSAVFHSRDVDLTEKLDYSS 499
           LSFFILLY KLPL+ Q +K YYEYA LW +YGF ++NSW WSAVFHSRDVDLTEKLDYSS
Sbjct: 139 LSFFILLYYKLPLK-QDKKAYYEYASLWHIYGFLSLNSWFWSAVFHSRDVDLTEKLDYSS 197

Query: 500 AVALLGYSLILAILRTFNMRDEAARVMVAAPLIAFVTTHILYLNLYKLDYGLNMIVCVVM 679
           AVA LGYSLI++ILR+FN+RDEAARVMVAAPL+AF+TTHIL++N YKLDYG NM VCVVM
Sbjct: 198 AVAFLGYSLIMSILRSFNVRDEAARVMVAAPLLAFLTTHILFINFYKLDYGWNMQVCVVM 257

Query: 680 GIAQLLLWVVWAGVTRHPSKWKLWAVVLATCLAMLLEIYDFPPYKGYVDAHALWHATTIP 859
            +AQLLLW +WAGVT HPS+WKLW VV+   LAMLLEIYDFPPY+GYVDAHALWHATTIP
Sbjct: 258 AVAQLLLWAIWAGVTGHPSRWKLWVVVIGGGLAMLLEIYDFPPYEGYVDAHALWHATTIP 317

Query: 860 ITYLWWSFIKDDAKFRTTDSVKKVK 934
           +TY+WWSFI+DDA+FRT++ +KK K
Sbjct: 318 LTYIWWSFIRDDAEFRTSNLLKKTK 342


>ref|XP_002266274.1| PREDICTED: post-GPI attachment to proteins factor 3 isoform 2
           [Vitis vinifera]
          Length = 342

 Score =  500 bits (1288), Expect = e-139
 Identities = 237/319 (74%), Positives = 266/319 (83%), Gaps = 14/319 (4%)
 Frame = +2

Query: 20  GDSHPRYQVCVEQCKETGCV-----------KDKLAVDGPWYVQEPLYL---QWDCQSNC 157
           GD+ P Y+ CVEQC++TGCV            D   VDGPWY+QEPLYL   QWDCQS+C
Sbjct: 25  GDADPLYRDCVEQCEKTGCVGERCFPHCKFPSDGAVVDGPWYLQEPLYLRWKQWDCQSDC 84

Query: 158 RYHCMLKTENEREVLGTGPVKYHGKWPFKRVLGIQEPVSVAFSLLNLAMQFHGWLSFFIL 337
           RY+CML  E ERE LG GPVKYHGKWPFKRV GIQEP SVA S LNLAMQFHGWLSFFIL
Sbjct: 85  RYYCMLDREKEREALGNGPVKYHGKWPFKRVYGIQEPASVALSALNLAMQFHGWLSFFIL 144

Query: 338 LYRKLPLRPQTRKPYYEYAGLWLMYGFFAMNSWVWSAVFHSRDVDLTEKLDYSSAVALLG 517
           L  KLPL+P  +K YYEY  LW +YG  +MNSW WSAVFHSRDVDLTEKLDYSSAVALLG
Sbjct: 145 LNYKLPLKPN-KKAYYEYTCLWHIYGLLSMNSWFWSAVFHSRDVDLTEKLDYSSAVALLG 203

Query: 518 YSLILAILRTFNMRDEAARVMVAAPLIAFVTTHILYLNLYKLDYGLNMIVCVVMGIAQLL 697
           +SLILAILR+FN+R EAARVMV+APL+AFVTTHILYLN YK DYG NM VCVVMG+AQLL
Sbjct: 204 FSLILAILRSFNVRVEAARVMVSAPLLAFVTTHILYLNFYKFDYGWNMKVCVVMGVAQLL 263

Query: 698 LWVVWAGVTRHPSKWKLWAVVLATCLAMLLEIYDFPPYKGYVDAHALWHATTIPITYLWW 877
           +W +WAGVTRHPS+WKLW VV+   LAMLLEIYDFPPY+G+VDAHALWHATTIP+TY+WW
Sbjct: 264 IWAIWAGVTRHPSRWKLWTVVVGGGLAMLLEIYDFPPYEGFVDAHALWHATTIPLTYIWW 323

Query: 878 SFIKDDAKFRTTDSVKKVK 934
           SFIKDDA+F+T + +KKVK
Sbjct: 324 SFIKDDAEFQTANLLKKVK 342


>ref|XP_002266197.1| PREDICTED: post-GPI attachment to proteins factor 3 isoform 1 [Vitis
            vinifera] gi|296082755|emb|CBI21760.3| unnamed protein
            product [Vitis vinifera]
          Length = 379

 Score =  500 bits (1288), Expect = e-139
 Identities = 237/319 (74%), Positives = 266/319 (83%), Gaps = 14/319 (4%)
 Frame = +2

Query: 20   GDSHPRYQVCVEQCKETGCV-----------KDKLAVDGPWYVQEPLYL---QWDCQSNC 157
            GD+ P Y+ CVEQC++TGCV            D   VDGPWY+QEPLYL   QWDCQS+C
Sbjct: 62   GDADPLYRDCVEQCEKTGCVGERCFPHCKFPSDGAVVDGPWYLQEPLYLRWKQWDCQSDC 121

Query: 158  RYHCMLKTENEREVLGTGPVKYHGKWPFKRVLGIQEPVSVAFSLLNLAMQFHGWLSFFIL 337
            RY+CML  E ERE LG GPVKYHGKWPFKRV GIQEP SVA S LNLAMQFHGWLSFFIL
Sbjct: 122  RYYCMLDREKEREALGNGPVKYHGKWPFKRVYGIQEPASVALSALNLAMQFHGWLSFFIL 181

Query: 338  LYRKLPLRPQTRKPYYEYAGLWLMYGFFAMNSWVWSAVFHSRDVDLTEKLDYSSAVALLG 517
            L  KLPL+P  +K YYEY  LW +YG  +MNSW WSAVFHSRDVDLTEKLDYSSAVALLG
Sbjct: 182  LNYKLPLKPN-KKAYYEYTCLWHIYGLLSMNSWFWSAVFHSRDVDLTEKLDYSSAVALLG 240

Query: 518  YSLILAILRTFNMRDEAARVMVAAPLIAFVTTHILYLNLYKLDYGLNMIVCVVMGIAQLL 697
            +SLILAILR+FN+R EAARVMV+APL+AFVTTHILYLN YK DYG NM VCVVMG+AQLL
Sbjct: 241  FSLILAILRSFNVRVEAARVMVSAPLLAFVTTHILYLNFYKFDYGWNMKVCVVMGVAQLL 300

Query: 698  LWVVWAGVTRHPSKWKLWAVVLATCLAMLLEIYDFPPYKGYVDAHALWHATTIPITYLWW 877
            +W +WAGVTRHPS+WKLW VV+   LAMLLEIYDFPPY+G+VDAHALWHATTIP+TY+WW
Sbjct: 301  IWAIWAGVTRHPSRWKLWTVVVGGGLAMLLEIYDFPPYEGFVDAHALWHATTIPLTYIWW 360

Query: 878  SFIKDDAKFRTTDSVKKVK 934
            SFIKDDA+F+T + +KKVK
Sbjct: 361  SFIKDDAEFQTANLLKKVK 379


>emb|CAN65586.1| hypothetical protein VITISV_034376 [Vitis vinifera]
          Length = 342

 Score =  500 bits (1288), Expect = e-139
 Identities = 237/319 (74%), Positives = 266/319 (83%), Gaps = 14/319 (4%)
 Frame = +2

Query: 20  GDSHPRYQVCVEQCKETGCV-----------KDKLAVDGPWYVQEPLYL---QWDCQSNC 157
           GD+ P Y+ CVEQC++TGCV            D   VDGPWY+QEPLYL   QWDCQS+C
Sbjct: 25  GDADPLYRDCVEQCEKTGCVGERCFPHCKFPSDGAVVDGPWYLQEPLYLRWKQWDCQSDC 84

Query: 158 RYHCMLKTENEREVLGTGPVKYHGKWPFKRVLGIQEPVSVAFSLLNLAMQFHGWLSFFIL 337
           RY+CML  E ERE LG GPVKYHGKWPFKRV GIQEP SVA S LNLAMQFHGWLSFFIL
Sbjct: 85  RYYCMLDREKEREALGNGPVKYHGKWPFKRVYGIQEPASVALSALNLAMQFHGWLSFFIL 144

Query: 338 LYRKLPLRPQTRKPYYEYAGLWLMYGFFAMNSWVWSAVFHSRDVDLTEKLDYSSAVALLG 517
           L  KLPL+P  +K YYEY  LW +YG  +MNSW WSAVFHSRDVDLTEKLDYSSAVALLG
Sbjct: 145 LNYKLPLKPN-KKAYYEYTCLWHIYGLLSMNSWFWSAVFHSRDVDLTEKLDYSSAVALLG 203

Query: 518 YSLILAILRTFNMRDEAARVMVAAPLIAFVTTHILYLNLYKLDYGLNMIVCVVMGIAQLL 697
           +SLILAILR+FN+R EAARVMV+APL+AFVTTHILYLN YK DYG NM VCVVMG+AQLL
Sbjct: 204 FSLILAILRSFNVRVEAARVMVSAPLLAFVTTHILYLNFYKFDYGWNMKVCVVMGVAQLL 263

Query: 698 LWVVWAGVTRHPSKWKLWAVVLATCLAMLLEIYDFPPYKGYVDAHALWHATTIPITYLWW 877
           +W +WAGVTRHPS+WKLW VV+   LAMLLEIYDFPPY+G+VDAHALWHATTIP+TY+WW
Sbjct: 264 IWTIWAGVTRHPSRWKLWTVVVGGGLAMLLEIYDFPPYEGFVDAHALWHATTIPLTYIWW 323

Query: 878 SFIKDDAKFRTTDSVKKVK 934
           SFIKDDA+F+T + +KKVK
Sbjct: 324 SFIKDDAEFQTANLLKKVK 342


>ref|XP_002280194.1| PREDICTED: post-GPI attachment to proteins factor 3 [Vitis
           vinifera] gi|147785290|emb|CAN61923.1| hypothetical
           protein VITISV_036651 [Vitis vinifera]
           gi|297741118|emb|CBI31849.3| unnamed protein product
           [Vitis vinifera]
          Length = 342

 Score =  492 bits (1266), Expect = e-137
 Identities = 230/319 (72%), Positives = 261/319 (81%), Gaps = 14/319 (4%)
 Frame = +2

Query: 20  GDSHPRYQVCVEQCKETGCVKDKL-----------AVDGPWYVQEPLYL---QWDCQSNC 157
           GDS P Y+ C+EQC++TGCV DK             + GPWY+QEPLYL   QWDC+S+C
Sbjct: 25  GDSDPLYKACIEQCEKTGCVGDKCFQHCKLSSDGNPIGGPWYLQEPLYLRWKQWDCRSDC 84

Query: 158 RYHCMLKTENEREVLGTGPVKYHGKWPFKRVLGIQEPVSVAFSLLNLAMQFHGWLSFFIL 337
           RYHCML  E ERE LG  PVKYHGKWPF+RV GIQEPVSVA + LNLAMQFHGW+SF IL
Sbjct: 85  RYHCMLAREEEREELGDKPVKYHGKWPFRRVYGIQEPVSVALATLNLAMQFHGWVSFLIL 144

Query: 338 LYRKLPLRPQTRKPYYEYAGLWLMYGFFAMNSWVWSAVFHSRDVDLTEKLDYSSAVALLG 517
           LY KLPLRP  +K +YEY GLW +YG  AMN+W W+AVFHSRDVDLTEKLDYSS VALLG
Sbjct: 145 LYYKLPLRPD-KKTFYEYTGLWHIYGILAMNAWFWNAVFHSRDVDLTEKLDYSSGVALLG 203

Query: 518 YSLILAILRTFNMRDEAARVMVAAPLIAFVTTHILYLNLYKLDYGLNMIVCVVMGIAQLL 697
           ++LILAILR FN+RDEAARVM+AAPL+AFVTTHILYLN YKLDYGLNM VC+ MGIAQLL
Sbjct: 204 FTLILAILRAFNVRDEAARVMIAAPLMAFVTTHILYLNFYKLDYGLNMKVCLTMGIAQLL 263

Query: 698 LWVVWAGVTRHPSKWKLWAVVLATCLAMLLEIYDFPPYKGYVDAHALWHATTIPITYLWW 877
           LW VWAGVT HPS+WKLW VV+   LAM LEIYDFPPY G+VDAHA+WHA  IP TYLWW
Sbjct: 264 LWTVWAGVTHHPSRWKLWVVVVGGALAMFLEIYDFPPYWGFVDAHAVWHALAIPFTYLWW 323

Query: 878 SFIKDDAKFRTTDSVKKVK 934
           SF+KDD++FRT+  +KKVK
Sbjct: 324 SFVKDDSEFRTSALMKKVK 342


Top