BLASTX nr result

ID: Coptis21_contig00008446 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00008446
         (459 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002319607.1| predicted protein [Populus trichocarpa] gi|2...   186   1e-45
ref|XP_002338425.1| predicted protein [Populus trichocarpa] gi|2...   179   2e-43
gb|ABK95950.1| unknown [Populus trichocarpa]                          179   2e-43
ref|XP_002337555.1| predicted protein [Populus trichocarpa] gi|2...   172   2e-41
ref|XP_002325947.1| predicted protein [Populus trichocarpa] gi|2...   172   3e-41

>ref|XP_002319607.1| predicted protein [Populus trichocarpa] gi|222857983|gb|EEE95530.1|
           predicted protein [Populus trichocarpa]
          Length = 164

 Score =  186 bits (473), Expect = 1e-45
 Identities = 90/132 (68%), Positives = 102/132 (77%)
 Frame = -1

Query: 396 FTFFPGNPKWPADKRSLTYTFLSGVEVIDLQTLRPLISRAFAKWAAVTQFTFAEAQAGAR 217
           ++FF G P+WP+ K  LTYTF S V+VID+Q LR   SRAF KWA VTQFTF EA  G++
Sbjct: 1   YSFFGGTPRWPSSKFHLTYTFSSSVQVIDMQELRSACSRAFQKWADVTQFTFQEASEGSQ 60

Query: 216 SDISIGFYSGAHGDSESFDGPSPFGPILAHAFRPTDGRFHYDADENWSTNPTTTQIDLES 37
           +DI IGF SG HGD   FDGP   G ILAHAF PTDGRFHYDADE WSTNP+  ++DLES
Sbjct: 61  ADIVIGFQSGDHGDRYPFDGP---GRILAHAFAPTDGRFHYDADEKWSTNPSADEVDLES 117

Query: 36  VAVHEIGHLLGL 1
           VAVHEIGHLLGL
Sbjct: 118 VAVHEIGHLLGL 129


>ref|XP_002338425.1| predicted protein [Populus trichocarpa] gi|222872207|gb|EEF09338.1|
           predicted protein [Populus trichocarpa]
          Length = 304

 Score =  179 bits (454), Expect = 2e-43
 Identities = 95/161 (59%), Positives = 109/161 (67%), Gaps = 8/161 (4%)
 Frame = -1

Query: 459 MMKPRCGVPDTTRMSSGT-------VSHFTFFPGNPKWPADKRSLTYTFLS-GVEVIDLQ 304
           MM PRCG+ D T  ++ +       V H+TFF G PKW   K  LTYTF S GV+V+D+ 
Sbjct: 110 MMIPRCGMHDITPNNTKSNYTKFHMVMHYTFFNGMPKWRPSKYHLTYTFGSDGVQVVDMD 169

Query: 303 TLRPLISRAFAKWAAVTQFTFAEAQAGARSDISIGFYSGAHGDSESFDGPSPFGPILAHA 124
           TLR + S AF KW+ V+  TF EA  GA ++I I FY G HGD   FDGP   G ILAHA
Sbjct: 170 TLRSVCSDAFKKWSDVSPLTFQEASDGASANIVIAFYRGDHGDGYPFDGP---GKILAHA 226

Query: 123 FRPTDGRFHYDADENWSTNPTTTQIDLESVAVHEIGHLLGL 1
           F P +GRFHYDADE WSTNP   QIDLESVAVHEIGHLLGL
Sbjct: 227 FSPENGRFHYDADEKWSTNPAMDQIDLESVAVHEIGHLLGL 267


>gb|ABK95950.1| unknown [Populus trichocarpa]
          Length = 304

 Score =  179 bits (454), Expect = 2e-43
 Identities = 95/161 (59%), Positives = 109/161 (67%), Gaps = 8/161 (4%)
 Frame = -1

Query: 459 MMKPRCGVPDTTRMSSGT-------VSHFTFFPGNPKWPADKRSLTYTFLS-GVEVIDLQ 304
           MM PRCG+ D T  ++ +       V H+TFF G PKW   K  LTYTF S GV+V+D+ 
Sbjct: 110 MMIPRCGMHDITPNNTKSNYTKFHMVMHYTFFNGMPKWRPSKYHLTYTFGSDGVQVVDMD 169

Query: 303 TLRPLISRAFAKWAAVTQFTFAEAQAGARSDISIGFYSGAHGDSESFDGPSPFGPILAHA 124
           TLR + S AF KW+ V+  TF EA  GA ++I I FY G HGD   FDGP   G ILAHA
Sbjct: 170 TLRSVCSDAFKKWSDVSPLTFQEASDGASANIVIAFYRGDHGDGYPFDGP---GKILAHA 226

Query: 123 FRPTDGRFHYDADENWSTNPTTTQIDLESVAVHEIGHLLGL 1
           F P +GRFHYDADE WSTNP   QIDLESVAVHEIGHLLGL
Sbjct: 227 FSPENGRFHYDADEKWSTNPAMDQIDLESVAVHEIGHLLGL 267


>ref|XP_002337555.1| predicted protein [Populus trichocarpa] gi|222839559|gb|EEE77896.1|
           predicted protein [Populus trichocarpa]
          Length = 171

 Score =  172 bits (437), Expect = 2e-41
 Identities = 88/136 (64%), Positives = 98/136 (72%), Gaps = 1/136 (0%)
 Frame = -1

Query: 405 VSHFTFFPGNPKWPADKRSLTYTFLS-GVEVIDLQTLRPLISRAFAKWAAVTQFTFAEAQ 229
           V H+TFF G PKW   K  LTYTF S GV+V+D+ TLR + S AF KW+ V+  TF EA 
Sbjct: 2   VMHYTFFNGMPKWRPSKYHLTYTFGSDGVQVVDMDTLRSVCSDAFKKWSDVSPLTFQEAS 61

Query: 228 AGARSDISIGFYSGAHGDSESFDGPSPFGPILAHAFRPTDGRFHYDADENWSTNPTTTQI 49
            GA ++I I FYSG HGD   FDGP   G ILAHAF P +GRFHYDADE WSTNP   QI
Sbjct: 62  DGASANIVIAFYSGDHGDGYPFDGP---GKILAHAFSPENGRFHYDADEKWSTNPAMDQI 118

Query: 48  DLESVAVHEIGHLLGL 1
           DLESVAVHEIGHLLGL
Sbjct: 119 DLESVAVHEIGHLLGL 134


>ref|XP_002325947.1| predicted protein [Populus trichocarpa] gi|222862822|gb|EEF00329.1|
           predicted protein [Populus trichocarpa]
          Length = 308

 Score =  172 bits (435), Expect = 3e-41
 Identities = 91/166 (54%), Positives = 105/166 (63%), Gaps = 13/166 (7%)
 Frame = -1

Query: 459 MMKPRCGVPDTTRMSSG-------------TVSHFTFFPGNPKWPADKRSLTYTFLSGVE 319
           MM PRCG+PD     S               V+H+ F  G  KWP  K +LTY F SGV+
Sbjct: 110 MMIPRCGMPDIINTPSAKPNSTKSKHKKVHVVAHYAF--GAQKWPPSKYALTYRFGSGVQ 167

Query: 318 VIDLQTLRPLISRAFAKWAAVTQFTFAEAQAGARSDISIGFYSGAHGDSESFDGPSPFGP 139
           V+   TLR + S+AF  WA V++FTF EA  GA +DI I F+SG HGD   FDGP   G 
Sbjct: 168 VVGSDTLRSVCSKAFQTWAKVSKFTFREATGGASADIVIEFFSGDHGDQSPFDGP---GN 224

Query: 138 ILAHAFRPTDGRFHYDADENWSTNPTTTQIDLESVAVHEIGHLLGL 1
            LAHAF P DGR HYDADENWST+P   QIDLE+V VHEIGHLLGL
Sbjct: 225 QLAHAFYPQDGRLHYDADENWSTDPAMDQIDLETVTVHEIGHLLGL 270


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