BLASTX nr result

ID: Coptis21_contig00008427 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00008427
         (304 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN75139.1| hypothetical protein VITISV_040756 [Vitis vinifera]    61   2e-10
emb|CBI23011.3| unnamed protein product [Vitis vinifera]               61   2e-10
ref|XP_002272717.2| PREDICTED: uncharacterized protein LOC100247...    61   2e-10
emb|CAN64660.1| hypothetical protein VITISV_009615 [Vitis vinifera]    55   3e-09
ref|XP_002263925.2| PREDICTED: uncharacterized protein LOC100258...    55   9e-09

>emb|CAN75139.1| hypothetical protein VITISV_040756 [Vitis vinifera]
          Length = 2281

 Score = 61.2 bits (147), Expect(2) = 2e-10
 Identities = 34/74 (45%), Positives = 45/74 (60%), Gaps = 2/74 (2%)
 Frame = +3

Query: 3    VPFPVLRKSGGCGSKILELRRSLKANWACNLLKSADKLTSNSHFPNVDSPIGCSSCHP-- 176
            +P P  +  GGCG++ LELRR  + NW  +L+KSA+ LT N   P++D   GCS C P  
Sbjct: 1270 IPCPP-KARGGCGTETLELRRIFEPNWVDHLIKSAEDLTMNFGSPDIDFSQGCSLCLPTA 1328

Query: 177  FVGKVFKNLEVRRA 218
              G   K+ EVRRA
Sbjct: 1329 STGSGEKHCEVRRA 1342



 Score = 28.9 bits (63), Expect(2) = 2e-10
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = +2

Query: 239  RFVFRSDSKDNYLYCPNAVDL 301
            R  FR +S D++LYCPN+  L
Sbjct: 1341 RAAFRENSHDDFLYCPNSACL 1361


>emb|CBI23011.3| unnamed protein product [Vitis vinifera]
          Length = 1904

 Score = 61.2 bits (147), Expect(2) = 2e-10
 Identities = 34/74 (45%), Positives = 45/74 (60%), Gaps = 2/74 (2%)
 Frame = +3

Query: 3    VPFPVLRKSGGCGSKILELRRSLKANWACNLLKSADKLTSNSHFPNVDSPIGCSSCHP-- 176
            +P P  +  GGCG++ LELRR  + NW  +L+KSA+ LT N   P++D   GCS C P  
Sbjct: 1264 IPCPP-KARGGCGTETLELRRIFEPNWVDHLIKSAEDLTMNFGSPDIDFSQGCSLCLPTA 1322

Query: 177  FVGKVFKNLEVRRA 218
              G   K+ EVRRA
Sbjct: 1323 STGSGEKHCEVRRA 1336



 Score = 28.9 bits (63), Expect(2) = 2e-10
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = +2

Query: 239  RFVFRSDSKDNYLYCPNAVDL 301
            R  FR +S D++LYCPN+  L
Sbjct: 1335 RAAFRENSHDDFLYCPNSACL 1355


>ref|XP_002272717.2| PREDICTED: uncharacterized protein LOC100247074 [Vitis vinifera]
          Length = 1876

 Score = 61.2 bits (147), Expect(2) = 2e-10
 Identities = 34/74 (45%), Positives = 45/74 (60%), Gaps = 2/74 (2%)
 Frame = +3

Query: 3    VPFPVLRKSGGCGSKILELRRSLKANWACNLLKSADKLTSNSHFPNVDSPIGCSSCHP-- 176
            +P P  +  GGCG++ LELRR  + NW  +L+KSA+ LT N   P++D   GCS C P  
Sbjct: 1306 IPCPP-KARGGCGTETLELRRIFEPNWVDHLIKSAEDLTMNFGSPDIDFSQGCSLCLPTA 1364

Query: 177  FVGKVFKNLEVRRA 218
              G   K+ EVRRA
Sbjct: 1365 STGSGEKHCEVRRA 1378



 Score = 28.9 bits (63), Expect(2) = 2e-10
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = +2

Query: 239  RFVFRSDSKDNYLYCPNAVDL 301
            R  FR +S D++LYCPN+  L
Sbjct: 1377 RAAFRENSHDDFLYCPNSACL 1397


>emb|CAN64660.1| hypothetical protein VITISV_009615 [Vitis vinifera]
          Length = 1160

 Score = 55.1 bits (131), Expect(2) = 3e-09
 Identities = 30/74 (40%), Positives = 45/74 (60%), Gaps = 2/74 (2%)
 Frame = +3

Query: 3   VPFPVLRKSGGCGSKILELRRSLKANWACNLLKSADKLTSNSHFPNVDSPIGCSSCHPFV 182
           +P P  ++ GGCG+ ILELRR+ KANW   L++S++ L  +   P+ +   GCS C P V
Sbjct: 415 IPCPP-KERGGCGTAILELRRNFKANWVMKLIQSSEDLICHYQLPDHNFSQGCSLCWPNV 473

Query: 183 --GKVFKNLEVRRA 218
                 +N E+R+A
Sbjct: 474 TGRNSEQNSEMRKA 487



 Score = 30.8 bits (68), Expect(2) = 3e-09
 Identities = 11/18 (61%), Positives = 14/18 (77%)
 Frame = +2

Query: 248 FRSDSKDNYLYCPNAVDL 301
           FR    DN+LYCPNAV++
Sbjct: 489 FRKHGHDNFLYCPNAVNI 506


>ref|XP_002263925.2| PREDICTED: uncharacterized protein LOC100258626 [Vitis vinifera]
          Length = 1035

 Score = 55.1 bits (131), Expect(2) = 9e-09
 Identities = 30/74 (40%), Positives = 45/74 (60%), Gaps = 2/74 (2%)
 Frame = +3

Query: 3   VPFPVLRKSGGCGSKILELRRSLKANWACNLLKSADKLTSNSHFPNVDSPIGCSSCHPFV 182
           +P P  ++ GGCG+ ILELRR+ KANW   L++S++ L  +   P+ +   GCS C P V
Sbjct: 415 IPCPP-KERGGCGTAILELRRNFKANWVMKLIQSSEDLICHYQLPDHNFSQGCSLCWPNV 473

Query: 183 --GKVFKNLEVRRA 218
                 +N E+R+A
Sbjct: 474 TGRNSEQNSEMRKA 487



 Score = 29.3 bits (64), Expect(2) = 9e-09
 Identities = 10/18 (55%), Positives = 14/18 (77%)
 Frame = +2

Query: 248 FRSDSKDNYLYCPNAVDL 301
           FR    DN+L+CPNAV++
Sbjct: 489 FRKHGHDNFLFCPNAVNI 506


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