BLASTX nr result

ID: Coptis21_contig00008403 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00008403
         (294 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002882587.1| hypothetical protein ARALYDRAFT_897026 [Arab...   141   5e-32
ref|NP_566336.1| uncharacterized protein [Arabidopsis thaliana] ...   140   1e-31
ref|NP_198523.1| uncharacterized protein [Arabidopsis thaliana] ...   138   4e-31
ref|XP_002309157.1| predicted protein [Populus trichocarpa] gi|2...   138   4e-31
ref|XP_002323612.1| predicted protein [Populus trichocarpa] gi|1...   137   7e-31

>ref|XP_002882587.1| hypothetical protein ARALYDRAFT_897026 [Arabidopsis lyrata subsp.
           lyrata] gi|297328427|gb|EFH58846.1| hypothetical protein
           ARALYDRAFT_897026 [Arabidopsis lyrata subsp. lyrata]
          Length = 170

 Score =  141 bits (356), Expect = 5e-32
 Identities = 64/75 (85%), Positives = 72/75 (96%)
 Frame = -2

Query: 227 MDEIMNKVGSYWLGKRANKEIDSVGDDFTSLSTSIEGGTKWLVNKLKGKMQKPLPELLRE 48
           MD+I+NKVGSYWLGK+ANK++DSVGDD  SLSTSIEGGTKWLVNK+KGKMQKPLPELL+E
Sbjct: 1   MDQILNKVGSYWLGKKANKQLDSVGDDINSLSTSIEGGTKWLVNKIKGKMQKPLPELLKE 60

Query: 47  YDLPVGIFPRDATNY 3
           + LPVGIFPRDATNY
Sbjct: 61  FGLPVGIFPRDATNY 75


>ref|NP_566336.1| uncharacterized protein [Arabidopsis thaliana]
           gi|30680674|ref|NP_850544.1| uncharacterized protein
           [Arabidopsis thaliana]
           gi|6403495|gb|AAF07835.1|AC010871_11 unknown protein
           [Arabidopsis thaliana] gi|21554089|gb|AAM63170.1|
           unknown [Arabidopsis thaliana]
           gi|98960915|gb|ABF58941.1| At3g08890 [Arabidopsis
           thaliana] gi|110743674|dbj|BAE99674.1| hypothetical
           protein [Arabidopsis thaliana]
           gi|332641170|gb|AEE74691.1| uncharacterized protein
           [Arabidopsis thaliana] gi|332641171|gb|AEE74692.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 170

 Score =  140 bits (352), Expect = 1e-31
 Identities = 63/75 (84%), Positives = 72/75 (96%)
 Frame = -2

Query: 227 MDEIMNKVGSYWLGKRANKEIDSVGDDFTSLSTSIEGGTKWLVNKLKGKMQKPLPELLRE 48
           MD+I+NKVGSYWLGK+ANK++DSVGDD  SLS+SIEGGTKWLVNK+KGKMQKPLPELL+E
Sbjct: 1   MDQILNKVGSYWLGKKANKQLDSVGDDINSLSSSIEGGTKWLVNKIKGKMQKPLPELLKE 60

Query: 47  YDLPVGIFPRDATNY 3
           + LPVGIFPRDATNY
Sbjct: 61  FGLPVGIFPRDATNY 75


>ref|NP_198523.1| uncharacterized protein [Arabidopsis thaliana]
           gi|10177986|dbj|BAB11359.1| unnamed protein product
           [Arabidopsis thaliana] gi|34365659|gb|AAQ65141.1|
           At5g37070 [Arabidopsis thaliana]
           gi|51970366|dbj|BAD43875.1| putative protein
           [Arabidopsis thaliana] gi|51971132|dbj|BAD44258.1|
           putative protein [Arabidopsis thaliana]
           gi|332006761|gb|AED94144.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 170

 Score =  138 bits (348), Expect = 4e-31
 Identities = 63/75 (84%), Positives = 72/75 (96%)
 Frame = -2

Query: 227 MDEIMNKVGSYWLGKRANKEIDSVGDDFTSLSTSIEGGTKWLVNKLKGKMQKPLPELLRE 48
           MD+I+NKVGSYWLG++ANKE +SVGDDF SLS+SIEGGTKWLVNKLKGKMQKPLPELL+E
Sbjct: 1   MDQILNKVGSYWLGQKANKEFNSVGDDFNSLSSSIEGGTKWLVNKLKGKMQKPLPELLKE 60

Query: 47  YDLPVGIFPRDATNY 3
           + LPVGIFP+DATNY
Sbjct: 61  FGLPVGIFPQDATNY 75


>ref|XP_002309157.1| predicted protein [Populus trichocarpa] gi|222855133|gb|EEE92680.1|
           predicted protein [Populus trichocarpa]
          Length = 170

 Score =  138 bits (348), Expect = 4e-31
 Identities = 62/75 (82%), Positives = 71/75 (94%)
 Frame = -2

Query: 227 MDEIMNKVGSYWLGKRANKEIDSVGDDFTSLSTSIEGGTKWLVNKLKGKMQKPLPELLRE 48
           MD ++NKVGSYWLG++A+KE +SVGDD  SLSTSIEGGTKWLVNKLKGKMQKPLP+LL+E
Sbjct: 1   MDAVLNKVGSYWLGQKASKEFNSVGDDINSLSTSIEGGTKWLVNKLKGKMQKPLPDLLKE 60

Query: 47  YDLPVGIFPRDATNY 3
           YDLP+GIFPRDATNY
Sbjct: 61  YDLPIGIFPRDATNY 75


>ref|XP_002323612.1| predicted protein [Populus trichocarpa] gi|118481879|gb|ABK92876.1|
           unknown [Populus trichocarpa]
           gi|118483598|gb|ABK93695.1| unknown [Populus
           trichocarpa] gi|222868242|gb|EEF05373.1| predicted
           protein [Populus trichocarpa]
          Length = 170

 Score =  137 bits (346), Expect = 7e-31
 Identities = 62/75 (82%), Positives = 71/75 (94%)
 Frame = -2

Query: 227 MDEIMNKVGSYWLGKRANKEIDSVGDDFTSLSTSIEGGTKWLVNKLKGKMQKPLPELLRE 48
           MD I+NKVGSYW+G++A+KE +SVGDD  SLSTSIEGGTKWLVNKLKGKMQKPLP+LL+E
Sbjct: 1   MDAILNKVGSYWVGQKASKEFNSVGDDINSLSTSIEGGTKWLVNKLKGKMQKPLPDLLKE 60

Query: 47  YDLPVGIFPRDATNY 3
           YDLP+GIFPRDATNY
Sbjct: 61  YDLPIGIFPRDATNY 75


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