BLASTX nr result

ID: Coptis21_contig00008386 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00008386
         (746 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002516579.1| 60S ribosomal protein L37, putative [Ricinus...   174   2e-41
ref|XP_002309570.1| predicted protein [Populus trichocarpa] gi|1...   172   5e-41
gb|ABK20886.1| unknown [Picea sitchensis] gi|116779815|gb|ABK214...   171   1e-40
ref|XP_002324820.1| predicted protein [Populus trichocarpa] gi|2...   170   3e-40
gb|ABK93790.1| unknown [Populus trichocarpa] gi|118486063|gb|ABK...   170   3e-40

>ref|XP_002516579.1| 60S ribosomal protein L37, putative [Ricinus communis]
           gi|223544399|gb|EEF45920.1| 60S ribosomal protein L37,
           putative [Ricinus communis]
          Length = 96

 Score =  174 bits (440), Expect = 2e-41
 Identities = 79/83 (95%), Positives = 83/83 (100%)
 Frame = +1

Query: 49  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAYPASRIRKYNWSVKAIRRKTTG 228
           MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAYPASR+RKYNWSVKAIRRKTTG
Sbjct: 1   MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAYPASRLRKYNWSVKAIRRKTTG 60

Query: 229 TGRMQYLRHLPRRFKSNFREGTQ 297
           TGRM+YLRH+PRRFK+NFREGTQ
Sbjct: 61  TGRMRYLRHVPRRFKTNFREGTQ 83


>ref|XP_002309570.1| predicted protein [Populus trichocarpa] gi|118482197|gb|ABK93027.1|
           unknown [Populus trichocarpa]
           gi|222855546|gb|EEE93093.1| predicted protein [Populus
           trichocarpa]
          Length = 94

 Score =  172 bits (437), Expect = 5e-41
 Identities = 78/83 (93%), Positives = 83/83 (100%)
 Frame = +1

Query: 49  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAYPASRIRKYNWSVKAIRRKTTG 228
           MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACA+PA+R+RKYNWSVKAIRRKTTG
Sbjct: 1   MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARVRKYNWSVKAIRRKTTG 60

Query: 229 TGRMQYLRHLPRRFKSNFREGTQ 297
           TGRM+YLRHLPRRFK+NFREGTQ
Sbjct: 61  TGRMKYLRHLPRRFKTNFREGTQ 83


>gb|ABK20886.1| unknown [Picea sitchensis] gi|116779815|gb|ABK21439.1| unknown
           [Picea sitchensis]
          Length = 95

 Score =  171 bits (433), Expect = 1e-40
 Identities = 76/83 (91%), Positives = 82/83 (98%)
 Frame = +1

Query: 49  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAYPASRIRKYNWSVKAIRRKTTG 228
           MGKGTGSFGKRRNKTHTLC+RCGRRSFH+QKSRCSACAYP+ RIRKYNWSVKAIRRKTTG
Sbjct: 1   MGKGTGSFGKRRNKTHTLCIRCGRRSFHIQKSRCSACAYPSKRIRKYNWSVKAIRRKTTG 60

Query: 229 TGRMQYLRHLPRRFKSNFREGTQ 297
           TGRM+YLRH+PRRFK+NFREGTQ
Sbjct: 61  TGRMRYLRHMPRRFKNNFREGTQ 83


>ref|XP_002324820.1| predicted protein [Populus trichocarpa] gi|222866254|gb|EEF03385.1|
           predicted protein [Populus trichocarpa]
          Length = 112

 Score =  170 bits (431), Expect = 3e-40
 Identities = 77/83 (92%), Positives = 82/83 (98%)
 Frame = +1

Query: 49  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAYPASRIRKYNWSVKAIRRKTTG 228
           MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACA+PA+R+RKYNWS KAIRRKTTG
Sbjct: 17  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARVRKYNWSEKAIRRKTTG 76

Query: 229 TGRMQYLRHLPRRFKSNFREGTQ 297
           TGRM+YLRHLPRRFK+NFREGTQ
Sbjct: 77  TGRMKYLRHLPRRFKTNFREGTQ 99


>gb|ABK93790.1| unknown [Populus trichocarpa] gi|118486063|gb|ABK94875.1| unknown
           [Populus trichocarpa]
          Length = 96

 Score =  170 bits (431), Expect = 3e-40
 Identities = 77/83 (92%), Positives = 82/83 (98%)
 Frame = +1

Query: 49  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAYPASRIRKYNWSVKAIRRKTTG 228
           MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACA+PA+R+RKYNWS KAIRRKTTG
Sbjct: 1   MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARVRKYNWSEKAIRRKTTG 60

Query: 229 TGRMQYLRHLPRRFKSNFREGTQ 297
           TGRM+YLRHLPRRFK+NFREGTQ
Sbjct: 61  TGRMKYLRHLPRRFKTNFREGTQ 83


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