BLASTX nr result

ID: Coptis21_contig00008383 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00008383
         (312 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34612.3| unnamed protein product [Vitis vinifera]               94   9e-18
ref|XP_002278777.1| PREDICTED: uncharacterized protein LOC100247...    94   9e-18
ref|XP_003631410.1| PREDICTED: uncharacterized protein LOC100247...    93   2e-17
ref|XP_002518934.1| phosphatidylcholine transfer protein, putati...    80   2e-13
ref|XP_002317053.1| predicted protein [Populus trichocarpa] gi|2...    79   4e-13

>emb|CBI34612.3| unnamed protein product [Vitis vinifera]
          Length = 384

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 47/80 (58%), Positives = 55/80 (68%)
 Frame = -3

Query: 241 KMQLPSIVSWVTDDSAEKETLXXXXXXXXXXXXXXXXEKPVVVTGEDLEHLCQLVEVKDG 62
           K+QLPS +SW+ DD  +K +L                E  VVV  +DLEHLCQLVEVKDG
Sbjct: 40  KLQLPSCISWIGDDGIDK-SLMAPTGDSDCSPSQLKAENSVVVAEDDLEHLCQLVEVKDG 98

Query: 61  GPAWIQMMDRSTPTMAYQAW 2
           GPAWIQMMDRSTPTM+Y+AW
Sbjct: 99  GPAWIQMMDRSTPTMSYKAW 118


>ref|XP_002278777.1| PREDICTED: uncharacterized protein LOC100247984 isoform 1 [Vitis
           vinifera]
          Length = 438

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 47/80 (58%), Positives = 55/80 (68%)
 Frame = -3

Query: 241 KMQLPSIVSWVTDDSAEKETLXXXXXXXXXXXXXXXXEKPVVVTGEDLEHLCQLVEVKDG 62
           K+QLPS +SW+ DD  +K +L                E  VVV  +DLEHLCQLVEVKDG
Sbjct: 94  KLQLPSCISWIGDDGIDK-SLMAPTGDSDCSPSQLKAENSVVVAEDDLEHLCQLVEVKDG 152

Query: 61  GPAWIQMMDRSTPTMAYQAW 2
           GPAWIQMMDRSTPTM+Y+AW
Sbjct: 153 GPAWIQMMDRSTPTMSYKAW 172


>ref|XP_003631410.1| PREDICTED: uncharacterized protein LOC100247984 isoform 2 [Vitis
           vinifera]
          Length = 427

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 45/80 (56%), Positives = 53/80 (66%)
 Frame = -3

Query: 241 KMQLPSIVSWVTDDSAEKETLXXXXXXXXXXXXXXXXEKPVVVTGEDLEHLCQLVEVKDG 62
           K+QLPS +SW+ DD  +K  +                   VVV  +DLEHLCQLVEVKDG
Sbjct: 94  KLQLPSCISWIGDDGIDKSLMAPTGE------------NSVVVAEDDLEHLCQLVEVKDG 141

Query: 61  GPAWIQMMDRSTPTMAYQAW 2
           GPAWIQMMDRSTPTM+Y+AW
Sbjct: 142 GPAWIQMMDRSTPTMSYKAW 161


>ref|XP_002518934.1| phosphatidylcholine transfer protein, putative [Ricinus communis]
           gi|223541921|gb|EEF43467.1| phosphatidylcholine transfer
           protein, putative [Ricinus communis]
          Length = 428

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 38/81 (46%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
 Frame = -3

Query: 241 KMQLPSIVSWVTDDSAEKETLXXXXXXXXXXXXXXXXEKPV-VVTGEDLEHLCQLVEVKD 65
           + QLPS +SWV D+  + ++                 ++   +V  +DLEHLC++V+ KD
Sbjct: 83  RFQLPSCMSWVADNHIQIDSASAPPSLSSDCSSSQLEKETSSIVNDDDLEHLCKIVDEKD 142

Query: 64  GGPAWIQMMDRSTPTMAYQAW 2
           GGPAWIQMMDRSTPTM YQAW
Sbjct: 143 GGPAWIQMMDRSTPTMTYQAW 163


>ref|XP_002317053.1| predicted protein [Populus trichocarpa] gi|222860118|gb|EEE97665.1|
           predicted protein [Populus trichocarpa]
          Length = 398

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 35/42 (83%), Positives = 38/42 (90%)
 Frame = -3

Query: 127 KPVVVTGEDLEHLCQLVEVKDGGPAWIQMMDRSTPTMAYQAW 2
           KP +V  +DLEHLC+LVEVKDGGPAWIQMMDRSTPTM YQAW
Sbjct: 92  KPNLVMEDDLEHLCKLVEVKDGGPAWIQMMDRSTPTMNYQAW 133


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