BLASTX nr result

ID: Coptis21_contig00008382 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00008382
         (1729 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321563.1| predicted protein [Populus trichocarpa] gi|2...   293   7e-77
ref|XP_002511457.1| ubiquitin-protein ligase, putative [Ricinus ...   277   7e-72
ref|XP_002280597.1| PREDICTED: U-box domain-containing protein 4...   275   4e-71
ref|XP_002318018.1| predicted protein [Populus trichocarpa] gi|2...   272   2e-70
emb|CBI34978.3| unnamed protein product [Vitis vinifera]              272   2e-70

>ref|XP_002321563.1| predicted protein [Populus trichocarpa] gi|222868559|gb|EEF05690.1|
            predicted protein [Populus trichocarpa]
          Length = 537

 Score =  293 bits (751), Expect = 7e-77
 Identities = 160/253 (63%), Positives = 194/253 (76%), Gaps = 2/253 (0%)
 Frame = -3

Query: 1661 ISLEKSNKVKIVRCGIVPVLIDVLKGGFNEAQEHAAGALFSLALDDDNKMAIGVLGALEP 1482
            +SLEK NKVKIVR G +P+LIDVLKGGF+EAQEHAAGALFSLAL+D+NKMAIGVLGAL+P
Sbjct: 288  LSLEKVNKVKIVRSGFIPLLIDVLKGGFDEAQEHAAGALFSLALEDENKMAIGVLGALQP 347

Query: 1481 LVHMLRCDSERARNDSALALYHLSLVNSNRVKLVKLGAVSVLLSLVKVGELASRALLILC 1302
            L+HMLR +SERAR+DS+LALYHLSL+ SNRVKLVKLGAVS+LLS+VK G+LASR LL+LC
Sbjct: 348  LMHMLRAESERARHDSSLALYHLSLIQSNRVKLVKLGAVSMLLSMVKSGDLASRLLLVLC 407

Query: 1301 NLAVCDEGRSVMLDENAVEYFIGMLKDGDLKSPSSVRENCVAVLYSLSLGSLRFKSLAKD 1122
            NLA C+EGRS MLD NAV   +G+L++G       +RENCVA L++LS GS+RFK LAK+
Sbjct: 408  NLAACNEGRSAMLDANAVAILVGILREGGGGDSEVIRENCVAALFALSHGSMRFKGLAKE 467

Query: 1121 AGAREVLVEVAEKGSDRXXXXXXXXXXXXXERTGREGDEEIDWESVMNSGVVSRIHQYRL 942
            A A EVL E+ E+GS+R              R   E DE+I WE V+ SG +SR  +YR 
Sbjct: 468  ARAVEVLREIEERGSNRAREKAKRILMMMRGRD--EEDEDICWEEVLESGGISRT-RYRA 524

Query: 941  GVGDC--ANSTGF 909
            G  +    NST F
Sbjct: 525  GGRNLPGPNSTNF 537


>ref|XP_002511457.1| ubiquitin-protein ligase, putative [Ricinus communis]
            gi|223550572|gb|EEF52059.1| ubiquitin-protein ligase,
            putative [Ricinus communis]
          Length = 518

 Score =  277 bits (708), Expect = 7e-72
 Identities = 158/265 (59%), Positives = 187/265 (70%)
 Frame = -3

Query: 1727 LRSLMXXXXXXXXXXXXXXXXNISLEKSNKVKIVRCGIVPVLIDVLKGGFNEAQEHAAGA 1548
            LRSL+                N+SLEKSNKVKIVR G VP+LIDVLK G +E QEHAAGA
Sbjct: 251  LRSLIASRYSVVQTNSIASLVNLSLEKSNKVKIVRSGFVPLLIDVLKAGSSEPQEHAAGA 310

Query: 1547 LFSLALDDDNKMAIGVLGALEPLVHMLRCDSERARNDSALALYHLSLVNSNRVKLVKLGA 1368
            LFSLAL D+NKMAIGVLGAL+PL+H LR +SER R+DSALALYHL+L+ SNRVKLVKLGA
Sbjct: 311  LFSLALQDENKMAIGVLGALQPLMHALRSESERTRHDSALALYHLTLIQSNRVKLVKLGA 370

Query: 1367 VSVLLSLVKVGELASRALLILCNLAVCDEGRSVMLDENAVEYFIGMLKDGDLKSPSSVRE 1188
            V+ LLS++K GELASR LLILCNLA C+EGRS MLD NAV   +GML++       + RE
Sbjct: 371  VATLLSMLKSGELASRLLLILCNLAACNEGRSAMLDGNAVGILVGMLRES--SDSEATRE 428

Query: 1187 NCVAVLYSLSLGSLRFKSLAKDAGAREVLVEVAEKGSDRXXXXXXXXXXXXXERTGREGD 1008
            NCVA L++LS GSLRFK LAK+A A EVL  + E+GSDR                GR  +
Sbjct: 429  NCVAALFALSHGSLRFKGLAKEARAVEVLRAIEERGSDR---AREKAKKILQFMRGRNEE 485

Query: 1007 EEIDWESVMNSGVVSRIHQYRLGVG 933
            EE DWE V+ SG     ++YR+G G
Sbjct: 486  EEDDWEGVLESG----RNRYRVGGG 506


>ref|XP_002280597.1| PREDICTED: U-box domain-containing protein 40 [Vitis vinifera]
          Length = 519

 Score =  275 bits (702), Expect = 4e-71
 Identities = 155/273 (56%), Positives = 189/273 (69%)
 Frame = -3

Query: 1727 LRSLMXXXXXXXXXXXXXXXXNISLEKSNKVKIVRCGIVPVLIDVLKGGFNEAQEHAAGA 1548
            LRSL+                N+SLEK NKVKIVR GIVP LIDVLKGGF EAQ+HAAGA
Sbjct: 252  LRSLIISRYSGIQVNAVAVLVNLSLEKINKVKIVRSGIVPPLIDVLKGGFPEAQDHAAGA 311

Query: 1547 LFSLALDDDNKMAIGVLGALEPLVHMLRCDSERARNDSALALYHLSLVNSNRVKLVKLGA 1368
            LFSLAL+D NK AIGVLGAL PL+H LR +SERARNDSALALYHLSLV SNR KLVKLGA
Sbjct: 312  LFSLALEDANKTAIGVLGALPPLLHTLRSESERARNDSALALYHLSLVQSNRTKLVKLGA 371

Query: 1367 VSVLLSLVKVGELASRALLILCNLAVCDEGRSVMLDENAVEYFIGMLKDGDLKSPSSVRE 1188
            V +L+ +V  G L SRALL+LCNLA C +GR+ MLD  AVE  +G+L+  +L S  S+RE
Sbjct: 372  VQILMGMVNSGHLWSRALLVLCNLAACPDGRTAMLDAGAVECLVGLLRGNELDS-DSIRE 430

Query: 1187 NCVAVLYSLSLGSLRFKSLAKDAGAREVLVEVAEKGSDRXXXXXXXXXXXXXERTGREGD 1008
            +C+A LY+LS G  RFK LAK+AGA E L+ V + GS+R             E+T    +
Sbjct: 431  SCLAALYALSFGGSRFKGLAKEAGAMETLMRVEKIGSERAREKAKKILEIMREKT----E 486

Query: 1007 EEIDWESVMNSGVVSRIHQYRLGVGDCANSTGF 909
            E +DWE++++SG+VSR   + L      NS+ F
Sbjct: 487  EGLDWEALLDSGLVSRTRYWPLQDRSSVNSSEF 519


>ref|XP_002318018.1| predicted protein [Populus trichocarpa] gi|222858691|gb|EEE96238.1|
            predicted protein [Populus trichocarpa]
          Length = 477

 Score =  272 bits (696), Expect = 2e-70
 Identities = 141/232 (60%), Positives = 177/232 (76%), Gaps = 2/232 (0%)
 Frame = -3

Query: 1661 ISLEKSNKVKIVRCGIVPVLIDVLKGGFNEAQEHAAGALFSLALDDDNKMAIGVLGALEP 1482
            +SLEK+NKVKIVR G +P+LIDVLKGGF+EAQEHAAGA FSLAL+D N+MAIGVLGAL+P
Sbjct: 244  LSLEKANKVKIVRSGFIPILIDVLKGGFSEAQEHAAGAFFSLALEDQNRMAIGVLGALQP 303

Query: 1481 LVHMLRCDSERARNDSALALYHLSLVNSNRVKLVKLGAVSVLLSLVKVGELASRALLILC 1302
            L+  L+ +SERAR+DSA+ALYHLSL+ SNRVKLVKLGAVS+LLS+V  G+LASR LL+LC
Sbjct: 304  LMQALKAESERARHDSAMALYHLSLMQSNRVKLVKLGAVSMLLSMVNSGDLASRLLLVLC 363

Query: 1301 NLAVCDEGRSVMLDENAVEYFIGMLKDGDLKSPSSVRENCVAVLYSLSLGSLRFKSLAKD 1122
            NLA C+EGRS MLD NAV   +G+L++G       ++E+CVA L++LS GS+RFK LAK+
Sbjct: 364  NLAACNEGRSAMLDSNAVAILVGILREGGGGHSEVIQESCVAALFALSHGSMRFKGLAKE 423

Query: 1121 AGAREVLVEVAEKGSDRXXXXXXXXXXXXXERTGR--EGDEEIDWESVMNSG 972
            A A EVL E+ E+GS R               +    E +EE+DWE V+  G
Sbjct: 424  ARAEEVLREIEERGSKRAREKAKRILMMMMRGSNEEVEWEEEVDWEEVLGFG 475


>emb|CBI34978.3| unnamed protein product [Vitis vinifera]
          Length = 683

 Score =  272 bits (695), Expect = 2e-70
 Identities = 152/262 (58%), Positives = 185/262 (70%)
 Frame = -3

Query: 1727 LRSLMXXXXXXXXXXXXXXXXNISLEKSNKVKIVRCGIVPVLIDVLKGGFNEAQEHAAGA 1548
            LRSL+                N+SLEK NKVKIVR GIVP LIDVLKGGF EAQ+HAAGA
Sbjct: 213  LRSLIISRYSGIQVNAVAVLVNLSLEKINKVKIVRSGIVPPLIDVLKGGFPEAQDHAAGA 272

Query: 1547 LFSLALDDDNKMAIGVLGALEPLVHMLRCDSERARNDSALALYHLSLVNSNRVKLVKLGA 1368
            LFSLAL+D NK AIGVLGAL PL+H LR +SERARNDSALALYHLSLV SNR KLVKLGA
Sbjct: 273  LFSLALEDANKTAIGVLGALPPLLHTLRSESERARNDSALALYHLSLVQSNRTKLVKLGA 332

Query: 1367 VSVLLSLVKVGELASRALLILCNLAVCDEGRSVMLDENAVEYFIGMLKDGDLKSPSSVRE 1188
            V +L+ +V  G L SRALL+LCNLA C +GR+ MLD  AVE  +G+L+  +L S  S+RE
Sbjct: 333  VQILMGMVNSGHLWSRALLVLCNLAACPDGRTAMLDAGAVECLVGLLRGNELDS-DSIRE 391

Query: 1187 NCVAVLYSLSLGSLRFKSLAKDAGAREVLVEVAEKGSDRXXXXXXXXXXXXXERTGREGD 1008
            +C+A LY+LS G  RFK LAK+AGA E L+ V + GS+R             E+T    +
Sbjct: 392  SCLAALYALSFGGSRFKGLAKEAGAMETLMRVEKIGSERAREKAKKILEIMREKT----E 447

Query: 1007 EEIDWESVMNSGVVSRIHQYRL 942
            E +DWE++++SG+VSR   + L
Sbjct: 448  EGLDWEALLDSGLVSRTRYWPL 469


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