BLASTX nr result
ID: Coptis21_contig00008356
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00008356 (891 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002279569.1| PREDICTED: uncharacterized GTP-binding prote... 130 2e-33 gb|ACS66798.2| unknown [Dimocarpus longan] 125 3e-32 ref|XP_002310606.1| predicted protein [Populus trichocarpa] gi|2... 120 3e-31 ref|XP_002533618.1| GTP-binding protein yptv3, putative [Ricinus... 120 4e-31 ref|XP_002307133.1| predicted protein [Populus trichocarpa] gi|2... 115 2e-29 >ref|XP_002279569.1| PREDICTED: uncharacterized GTP-binding protein At5g64813 [Vitis vinifera] gi|147843269|emb|CAN80534.1| hypothetical protein VITISV_035973 [Vitis vinifera] gi|296082516|emb|CBI21521.3| unnamed protein product [Vitis vinifera] Length = 336 Score = 130 bits (328), Expect(2) = 2e-33 Identities = 66/109 (60%), Positives = 78/109 (71%) Frame = +3 Query: 87 LLIRRRYFSDEMHSPNPWSNTPAPKPVHDSGEILSDDDHHFYKTPSFIGDPYKYNALPPL 266 LLIRRRYFSDE+ +P+PWS +P P+ +G+ LS+D+ FYK S GDPYKYN LPPL Sbjct: 229 LLIRRRYFSDELPAPSPWSISPVQGPIQRAGDNLSEDNQ-FYKNTSLGGDPYKYNVLPPL 287 Query: 267 PAQRNXXXXXXXXXXXXVSVSENYSLPRFALSGSSEIGNTRSKRTDINV 413 PAQRN VSV+ENY+LPRFAL+GS EI NTR KR DINV Sbjct: 288 PAQRNLTPPPTLYPQQPVSVAENYNLPRFALNGSPEIINTRQKRADINV 336 Score = 38.9 bits (89), Expect(2) = 2e-33 Identities = 17/24 (70%), Positives = 21/24 (87%) Frame = +1 Query: 7 GGLLVAAREARYDKEAVMKFFHVV 78 GG+L AA+EAR DKEAVMKFF ++ Sbjct: 207 GGILAAAKEARVDKEAVMKFFRLL 230 >gb|ACS66798.2| unknown [Dimocarpus longan] Length = 338 Score = 125 bits (313), Expect(2) = 3e-32 Identities = 66/110 (60%), Positives = 75/110 (68%), Gaps = 1/110 (0%) Frame = +3 Query: 87 LLIRRRYFSDEMHSPNPWSNTPAPKPVHDSGEILSDDDHHFYKTPSFIGDPYKYNALPPL 266 +LIRRRYFSDE+ PNPWS +PA KP + D+ FYK+ S GDPYKYN LPPL Sbjct: 229 MLIRRRYFSDELPVPNPWSISPAQKPSSQRLDENFSDEDSFYKSTSLSGDPYKYNTLPPL 288 Query: 267 PAQRNXXXXXXXXXXXXVSVSENYSLPRFALSGSSEIGNT-RSKRTDINV 413 PAQRN VSV ENYSLPRF+ SGSSEI +T RSKR+DINV Sbjct: 289 PAQRNLTPPPTLYPQQPVSVPENYSLPRFSPSGSSEISSTARSKRSDINV 338 Score = 40.4 bits (93), Expect(2) = 3e-32 Identities = 17/26 (65%), Positives = 22/26 (84%) Frame = +1 Query: 1 GRGGLLVAAREARYDKEAVMKFFHVV 78 G GG + AA+EARYDKEAV+KFF ++ Sbjct: 205 GSGGAIAAAKEARYDKEAVIKFFRML 230 >ref|XP_002310606.1| predicted protein [Populus trichocarpa] gi|222853509|gb|EEE91056.1| predicted protein [Populus trichocarpa] Length = 336 Score = 120 bits (300), Expect(2) = 3e-31 Identities = 64/109 (58%), Positives = 73/109 (66%), Gaps = 1/109 (0%) Frame = +3 Query: 90 LIRRRYFSDEMHSPNPWSNTPAPKPVHDSGEILSDDDHHFYKTPSFIGDPYKYNALPPLP 269 LIRRRYFSDE+ +P+PWS P + V E SD+D FYKT S GDPYKYN LPPLP Sbjct: 229 LIRRRYFSDELPAPSPWSAYPVQRSVQRLDENTSDEDP-FYKTTSLAGDPYKYNTLPPLP 287 Query: 270 AQRNXXXXXXXXXXXXVSVSENYSLPRFALSGSSEIGNT-RSKRTDINV 413 AQRN VSV+E+YS+PRF L+GS EI NT R KR DINV Sbjct: 288 AQRNLTPPPTLYPQQPVSVTESYSIPRFTLTGSQEISNTARLKRMDINV 336 Score = 42.0 bits (97), Expect(2) = 3e-31 Identities = 18/26 (69%), Positives = 22/26 (84%) Frame = +1 Query: 1 GRGGLLVAAREARYDKEAVMKFFHVV 78 G GGL+ AA+EARYDKEAV+KFF + Sbjct: 204 GSGGLIAAAKEARYDKEAVVKFFRTL 229 >ref|XP_002533618.1| GTP-binding protein yptv3, putative [Ricinus communis] gi|223526492|gb|EEF28762.1| GTP-binding protein yptv3, putative [Ricinus communis] Length = 336 Score = 120 bits (301), Expect(2) = 4e-31 Identities = 63/110 (57%), Positives = 75/110 (68%), Gaps = 1/110 (0%) Frame = +3 Query: 87 LLIRRRYFSDEMHSPNPWSNTPAPKPVHDSGEILSDDDHHFYKTPSFIGDPYKYNALPPL 266 +LIRRRYFSDE+ +P+PW+ +PA + V E SDDD FYK+ GDPYKYN LPPL Sbjct: 228 MLIRRRYFSDELTAPSPWTVSPAQRSVQRLDENSSDDDQ-FYKSKRLTGDPYKYNMLPPL 286 Query: 267 PAQRNXXXXXXXXXXXXVSVSENYSLPRFALSGSSEIGNT-RSKRTDINV 413 PAQRN VSV+ENYS PRF+LS + E+ NT RSKR DINV Sbjct: 287 PAQRNLTPPPTLYPQQPVSVTENYSFPRFSLSDAQELSNTARSKRLDINV 336 Score = 41.2 bits (95), Expect(2) = 4e-31 Identities = 17/26 (65%), Positives = 23/26 (88%) Frame = +1 Query: 1 GRGGLLVAAREARYDKEAVMKFFHVV 78 G GGL+ AA+EARYDKEA++KFF ++ Sbjct: 204 GGGGLIAAAKEARYDKEALLKFFRML 229 >ref|XP_002307133.1| predicted protein [Populus trichocarpa] gi|222856582|gb|EEE94129.1| predicted protein [Populus trichocarpa] Length = 336 Score = 115 bits (288), Expect(2) = 2e-29 Identities = 62/110 (56%), Positives = 72/110 (65%), Gaps = 1/110 (0%) Frame = +3 Query: 87 LLIRRRYFSDEMHSPNPWSNTPAPKPVHDSGEILSDDDHHFYKTPSFIGDPYKYNALPPL 266 +LIRRRYFSDE+ + +PWS +P + V E +SD+D FYK S GD YKYN LPPL Sbjct: 228 MLIRRRYFSDELPASSPWSASPVQRSVQRLDENISDEDP-FYKATSLAGDSYKYNMLPPL 286 Query: 267 PAQRNXXXXXXXXXXXXVSVSENYSLPRFALSGSSEIGNT-RSKRTDINV 413 PAQRN VSV E+Y +PRF LSGS EI NT RSKR DINV Sbjct: 287 PAQRNLTPPPTLYPQQPVSVRESYGIPRFPLSGSQEISNTARSKRMDINV 336 Score = 40.4 bits (93), Expect(2) = 2e-29 Identities = 17/26 (65%), Positives = 23/26 (88%) Frame = +1 Query: 1 GRGGLLVAAREARYDKEAVMKFFHVV 78 G GGL+ AA+EARYDKEAV++FF ++ Sbjct: 204 GSGGLISAAKEARYDKEAVVRFFRML 229