BLASTX nr result
ID: Coptis21_contig00008351
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00008351 (283 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AFK36826.1| unknown [Lotus japonicus] 72 6e-11 gb|AFK36319.1| unknown [Lotus japonicus] 72 6e-11 ref|NP_197572.1| chaperonin 20 [Arabidopsis thaliana] gi|3068793... 71 1e-10 ref|XP_003609972.1| 20 kDa chaperonin [Medicago truncatula] gi|3... 71 1e-10 gb|ACJ84537.1| unknown [Medicago truncatula] gi|388500526|gb|AFK... 71 1e-10 >gb|AFK36826.1| unknown [Lotus japonicus] Length = 254 Score = 71.6 bits (174), Expect = 6e-11 Identities = 34/40 (85%), Positives = 38/40 (95%) Frame = +2 Query: 143 STLKPLGDRVLVKIKSAEEKSVGGILLPSTAQSKPQGGEL 262 + +KPLGDRVLVKIK AEEK+VGGILLPSTAQSKPQGGE+ Sbjct: 61 TAIKPLGDRVLVKIKEAEEKTVGGILLPSTAQSKPQGGEV 100 >gb|AFK36319.1| unknown [Lotus japonicus] Length = 254 Score = 71.6 bits (174), Expect = 6e-11 Identities = 34/40 (85%), Positives = 38/40 (95%) Frame = +2 Query: 143 STLKPLGDRVLVKIKSAEEKSVGGILLPSTAQSKPQGGEL 262 + +KPLGDRVLVKIK AEEK+VGGILLPSTAQSKPQGGE+ Sbjct: 61 TAIKPLGDRVLVKIKEAEEKTVGGILLPSTAQSKPQGGEV 100 >ref|NP_197572.1| chaperonin 20 [Arabidopsis thaliana] gi|30687936|ref|NP_851045.1| chaperonin 20 [Arabidopsis thaliana] gi|334187803|ref|NP_001190350.1| chaperonin 20 [Arabidopsis thaliana] gi|297808145|ref|XP_002871956.1| hypothetical protein ARALYDRAFT_488978 [Arabidopsis lyrata subsp. lyrata] gi|12643263|sp|O65282.2|CH10C_ARATH RecName: Full=20 kDa chaperonin, chloroplastic; AltName: Full=Chaperonin 10; Short=Ch-CPN10; Short=Cpn10; AltName: Full=Chaperonin 20; AltName: Full=Protein Cpn21; Flags: Precursor gi|10179872|gb|AAG13931.1|AF268068_1 chaperonin 10 [Arabidopsis thaliana] gi|16226815|gb|AAL16269.1|AF428339_1 AT5g20720/T1M15_120 [Arabidopsis thaliana] gi|16226911|gb|AAL16296.1|AF428366_1 AT5g20720/T1M15_120 [Arabidopsis thaliana] gi|4127456|emb|CAA09368.1| Cpn21 protein [Arabidopsis thaliana] gi|14334612|gb|AAK59484.1| putative chloroplast Cpn21 protein [Arabidopsis thaliana] gi|14587373|dbj|BAB61619.1| chaperonin 20 [Arabidopsis thaliana] gi|17065646|gb|AAL33817.1| putative chloroplast Cpn21 protein [Arabidopsis thaliana] gi|297317793|gb|EFH48215.1| hypothetical protein ARALYDRAFT_488978 [Arabidopsis lyrata subsp. lyrata] gi|332005498|gb|AED92881.1| chaperonin 20 [Arabidopsis thaliana] gi|332005499|gb|AED92882.1| chaperonin 20 [Arabidopsis thaliana] gi|332005500|gb|AED92883.1| chaperonin 20 [Arabidopsis thaliana] Length = 253 Score = 70.9 bits (172), Expect = 1e-10 Identities = 33/40 (82%), Positives = 39/40 (97%) Frame = +2 Query: 143 STLKPLGDRVLVKIKSAEEKSVGGILLPSTAQSKPQGGEL 262 +++KPLGDRVLVKIK AEEK++GGILLPSTAQSKPQGGE+ Sbjct: 60 TSIKPLGDRVLVKIKEAEEKTLGGILLPSTAQSKPQGGEV 99 >ref|XP_003609972.1| 20 kDa chaperonin [Medicago truncatula] gi|355511027|gb|AES92169.1| 20 kDa chaperonin [Medicago truncatula] Length = 207 Score = 70.9 bits (172), Expect = 1e-10 Identities = 34/40 (85%), Positives = 38/40 (95%) Frame = +2 Query: 143 STLKPLGDRVLVKIKSAEEKSVGGILLPSTAQSKPQGGEL 262 +T+KPLGDRVLVKIK AEEK+ GGILLPSTAQSKPQGGE+ Sbjct: 14 TTVKPLGDRVLVKIKDAEEKTQGGILLPSTAQSKPQGGEV 53 >gb|ACJ84537.1| unknown [Medicago truncatula] gi|388500526|gb|AFK38329.1| unknown [Medicago truncatula] Length = 253 Score = 70.9 bits (172), Expect = 1e-10 Identities = 34/40 (85%), Positives = 38/40 (95%) Frame = +2 Query: 143 STLKPLGDRVLVKIKSAEEKSVGGILLPSTAQSKPQGGEL 262 +T+KPLGDRVLVKIK AEEK+ GGILLPSTAQSKPQGGE+ Sbjct: 60 TTVKPLGDRVLVKIKDAEEKTQGGILLPSTAQSKPQGGEV 99