BLASTX nr result

ID: Coptis21_contig00008333 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00008333
         (1637 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001240057.1| uncharacterized protein LOC100787790 [Glycin...   456   e-126
ref|XP_003607708.1| C2H2 zinc finger protein [Medicago truncatul...   454   e-125
gb|AFK40972.1| unknown [Medicago truncatula]                          454   e-125
ref|XP_002282818.2| PREDICTED: uncharacterized protein LOC100260...   453   e-125
emb|CBI20489.3| unnamed protein product [Vitis vinifera]              450   e-124

>ref|NP_001240057.1| uncharacterized protein LOC100787790 [Glycine max]
            gi|255636705|gb|ACU18688.1| unknown [Glycine max]
          Length = 441

 Score =  456 bits (1173), Expect = e-126
 Identities = 235/333 (70%), Positives = 262/333 (78%), Gaps = 6/333 (1%)
 Frame = -2

Query: 982  MPTVWFTLKKSLHCKSEPSDVYDPKSKNHLSSILTKKSSRSGCSRSIANLKDVIHGSHRQ 803
            MPTVWF+LKKSLHCKSEPSDV+DPK++  LS+ILTK++ RSGCSRSIANLKDVIHGS R 
Sbjct: 17   MPTVWFSLKKSLHCKSEPSDVHDPKTRKQLSTILTKRAGRSGCSRSIANLKDVIHGSKRH 76

Query: 802  IEKPVSCSPRSIGSSEFLNPITHEVILSNSRCELKISXXXXXXXXXXXXXXXXXXXXXXX 623
            ++KP SCSPRSIGSSEFLNPITHEVILSNSRCELKI+                       
Sbjct: 77   LDKPPSCSPRSIGSSEFLNPITHEVILSNSRCELKITGYGGFQEGGVGSGGGGSNAGGGS 136

Query: 622  T----ISXXXXXXXGNHTMHHYSPSFRNSTTP--KSPRLITDKEGYGFGGSARFGRVGIR 461
            T    +        G+ TMH+++PSFR S+TP  KSP L +DKEG G  G+        R
Sbjct: 137  TFVGTLRPGTPGPGGHPTMHYFNPSFRTSSTPPRKSPFLSSDKEGSGPHGAGLHS--SNR 194

Query: 460  MKSKASHDGSSLVSCHKCGEQFGKWEAVEAHHLSKHAVTELVEGDSSRKIVEIICRTSWL 281
            +  +   +GSS V+CHKCGEQF KW+A EAHHLSKHAVTELVEGDSSRKIVEIICRTSWL
Sbjct: 195  LSLETDSNGSSTVTCHKCGEQFNKWDAAEAHHLSKHAVTELVEGDSSRKIVEIICRTSWL 254

Query: 280  KSENNCGRIERVLKVHNMQKTLSRFEEYREMVKIKASKLPKKHPRCLADGNELLRFYGTT 101
            KSEN CGRIERVLKVHNMQKTL+RFEEYREMVKIKASKL KKHPRCLADGNELLRFYGTT
Sbjct: 255  KSENQCGRIERVLKVHNMQKTLARFEEYREMVKIKASKLQKKHPRCLADGNELLRFYGTT 314

Query: 100  VACSLGTNGSSSLCISEKCSVCRIIRHGFSTKK 2
            V+CSLG NGSSSLC+SEKC VCRIIR+GFS KK
Sbjct: 315  VSCSLGLNGSSSLCLSEKCCVCRIIRNGFSAKK 347


>ref|XP_003607708.1| C2H2 zinc finger protein [Medicago truncatula]
            gi|358345288|ref|XP_003636713.1| C2H2 zinc finger protein
            [Medicago truncatula] gi|355502648|gb|AES83851.1| C2H2
            zinc finger protein [Medicago truncatula]
            gi|355508763|gb|AES89905.1| C2H2 zinc finger protein
            [Medicago truncatula]
          Length = 437

 Score =  454 bits (1169), Expect = e-125
 Identities = 239/336 (71%), Positives = 261/336 (77%), Gaps = 9/336 (2%)
 Frame = -2

Query: 982  MPTVWFTLKKSLHCKSEPSDVYDPKSKNHLSSILTKKSS--RSGCSRSIANLKDVIHGSH 809
            MPTVWF+LKKSLHCKSEPSDV+DPK++ HLS+ILTKK    RSGCSRSIANLKDVIHGS 
Sbjct: 11   MPTVWFSLKKSLHCKSEPSDVHDPKTRKHLSTILTKKGGGGRSGCSRSIANLKDVIHGSK 70

Query: 808  RQIEKPVSCSPRSIGSSEFLNPITHEVILSNSRCELKISXXXXXXXXXXXXXXXXXXXXX 629
            R IEKP SCSPRSIGSSEFLNPITHEVILSNSRCELKI+                     
Sbjct: 71   RHIEKPPSCSPRSIGSSEFLNPITHEVILSNSRCELKITGFQEGINGGGNNASGGSSSGG 130

Query: 628  XXT----ISXXXXXXXGNHTMHHYSPSFRNSTTP--KSPRLITD-KEGYGFGGSARFGRV 470
              T    +        G+ TMH+++PSFR S+TP  KSP L+++   G+  GG       
Sbjct: 131  SSTYVGTLRPGTPGPGGHPTMHYFNPSFRTSSTPPRKSPFLLSEGSNGFHGGGGVHSSN- 189

Query: 469  GIRMKSKASHDGSSLVSCHKCGEQFGKWEAVEAHHLSKHAVTELVEGDSSRKIVEIICRT 290
              RM  +   +GSS V+CHKCGEQF KWEA EAHHLSKHAVTELVEGDSSRKIVEIICRT
Sbjct: 190  --RMSLETDSNGSSTVTCHKCGEQFNKWEAAEAHHLSKHAVTELVEGDSSRKIVEIICRT 247

Query: 289  SWLKSENNCGRIERVLKVHNMQKTLSRFEEYREMVKIKASKLPKKHPRCLADGNELLRFY 110
            SWLKSEN+CGRIERVLKVHNMQKTL+RFEEYREMVKIKASKL KKHPRCLADGNELLRFY
Sbjct: 248  SWLKSENHCGRIERVLKVHNMQKTLARFEEYREMVKIKASKLQKKHPRCLADGNELLRFY 307

Query: 109  GTTVACSLGTNGSSSLCISEKCSVCRIIRHGFSTKK 2
            GTTVACSLG NGSSSLC+SEKC VCRIIR GFS KK
Sbjct: 308  GTTVACSLGLNGSSSLCLSEKCCVCRIIRSGFSAKK 343


>gb|AFK40972.1| unknown [Medicago truncatula]
          Length = 437

 Score =  454 bits (1167), Expect = e-125
 Identities = 239/336 (71%), Positives = 261/336 (77%), Gaps = 9/336 (2%)
 Frame = -2

Query: 982  MPTVWFTLKKSLHCKSEPSDVYDPKSKNHLSSILTKKSS--RSGCSRSIANLKDVIHGSH 809
            MPTVWF+LKKSLHCKSEPSDV+DPK++ HLS+ILTKK    RSGCSRSIANLKDVIHGS 
Sbjct: 11   MPTVWFSLKKSLHCKSEPSDVHDPKTRKHLSTILTKKGGGGRSGCSRSIANLKDVIHGSK 70

Query: 808  RQIEKPVSCSPRSIGSSEFLNPITHEVILSNSRCELKISXXXXXXXXXXXXXXXXXXXXX 629
            R IEKP SCSPRSIGSSEFLNPITHEVILSNSRCELKI+                     
Sbjct: 71   RHIEKPPSCSPRSIGSSEFLNPITHEVILSNSRCELKITGFQEGINGGGNNASGGSSSGG 130

Query: 628  XXT----ISXXXXXXXGNHTMHHYSPSFRNSTTP--KSPRLITD-KEGYGFGGSARFGRV 470
              T    +        G+ TMH+++PSFR S+TP  KSP L+++   G+  GG       
Sbjct: 131  SSTYVGTLRPGTPGPGGHPTMHYFNPSFRTSSTPPRKSPFLLSEGSNGFHGGGGVHSSN- 189

Query: 469  GIRMKSKASHDGSSLVSCHKCGEQFGKWEAVEAHHLSKHAVTELVEGDSSRKIVEIICRT 290
              RM  +   +GSS V+CHKCGEQF KWEA EAHHLSKHAVTELVEGDSSRKIVEIICRT
Sbjct: 190  --RMSLETDSNGSSTVTCHKCGEQFNKWEAAEAHHLSKHAVTELVEGDSSRKIVEIICRT 247

Query: 289  SWLKSENNCGRIERVLKVHNMQKTLSRFEEYREMVKIKASKLPKKHPRCLADGNELLRFY 110
            SWLKSEN+CGRIERVLKVHNMQKTL+RFEEYREMVKIKASKL KKHPRCLADGNELLRFY
Sbjct: 248  SWLKSENHCGRIERVLKVHNMQKTLARFEEYREMVKIKASKLQKKHPRCLADGNELLRFY 307

Query: 109  GTTVACSLGTNGSSSLCISEKCSVCRIIRHGFSTKK 2
            GTTVACSLG NGSSSLC+SEKC VCRIIR GFS KK
Sbjct: 308  GTTVACSLGLNGSSSLCLSEKCWVCRIIRSGFSAKK 343


>ref|XP_002282818.2| PREDICTED: uncharacterized protein LOC100260605 [Vitis vinifera]
          Length = 483

 Score =  453 bits (1165), Expect = e-125
 Identities = 237/349 (67%), Positives = 264/349 (75%), Gaps = 8/349 (2%)
 Frame = -2

Query: 1024 ED*RRENK*RG*KKMPTVWFTLKKSLHCKSEPSDVYDPKSKNHLSSILTKKSSRSGCSRS 845
            E+ ++ENK    K MPTVW +L++SLHCKSEPSDV+DPK++  LS+ILTKK  RSGCSRS
Sbjct: 44   EEKKKENKG---KNMPTVWLSLRRSLHCKSEPSDVHDPKARRQLSTILTKKPCRSGCSRS 100

Query: 844  IANLKDVIHGSHRQIEKPVSCSPRSIGSSEFLNPITHEVILSNSRCELKISXXXXXXXXX 665
            IANLKDVIHGS R +EKP SCSPRSIGSSEFLNPITHEVILSNSRCELKI+         
Sbjct: 101  IANLKDVIHGSKRHMEKPPSCSPRSIGSSEFLNPITHEVILSNSRCELKITGFGGFQEGG 160

Query: 664  XXXXXXXXXXXXXXTISXXXXXXXGNHTMHHYSPSFRNSTTP--KSPRLITDKEGYGFGG 491
                          T              H     F++ +TP  KSP L++D+EG GFGG
Sbjct: 161  GGGGGGGVGTGGGSTFVGTLRPGTPGPGGHPTMHYFKSPSTPPRKSPFLLSDREGSGFGG 220

Query: 490  SARFG--RVGIRMKSKASHD----GSSLVSCHKCGEQFGKWEAVEAHHLSKHAVTELVEG 329
            S  FG     I   ++AS D    G+S V+CHKCGEQF KWEAVE HHLSKHAVTELVEG
Sbjct: 221  STIFGGGSGAIHSNNRASLDTDSNGTSAVTCHKCGEQFSKWEAVETHHLSKHAVTELVEG 280

Query: 328  DSSRKIVEIICRTSWLKSENNCGRIERVLKVHNMQKTLSRFEEYREMVKIKASKLPKKHP 149
            DSSRKIVEIICRTSWLKSEN+CGRIERVLKVHNMQKTL RFEEYREMVK KASKLPKKHP
Sbjct: 281  DSSRKIVEIICRTSWLKSENHCGRIERVLKVHNMQKTLGRFEEYREMVKTKASKLPKKHP 340

Query: 148  RCLADGNELLRFYGTTVACSLGTNGSSSLCISEKCSVCRIIRHGFSTKK 2
            RCLADGNELLRFYGTT+ C+LG NGSS+LCIS+KC VCRIIRHGFS KK
Sbjct: 341  RCLADGNELLRFYGTTMTCALGVNGSSNLCISDKCCVCRIIRHGFSAKK 389


>emb|CBI20489.3| unnamed protein product [Vitis vinifera]
          Length = 392

 Score =  450 bits (1157), Expect = e-124
 Identities = 233/335 (69%), Positives = 257/335 (76%), Gaps = 8/335 (2%)
 Frame = -2

Query: 982 MPTVWFTLKKSLHCKSEPSDVYDPKSKNHLSSILTKKSSRSGCSRSIANLKDVIHGSHRQ 803
           MPTVW +L++SLHCKSEPSDV+DPK++  LS+ILTKK  RSGCSRSIANLKDVIHGS R 
Sbjct: 1   MPTVWLSLRRSLHCKSEPSDVHDPKARRQLSTILTKKPCRSGCSRSIANLKDVIHGSKRH 60

Query: 802 IEKPVSCSPRSIGSSEFLNPITHEVILSNSRCELKISXXXXXXXXXXXXXXXXXXXXXXX 623
           +EKP SCSPRSIGSSEFLNPITHEVILSNSRCELKI+                       
Sbjct: 61  MEKPPSCSPRSIGSSEFLNPITHEVILSNSRCELKIT----------------------- 97

Query: 622 TISXXXXXXXGNHTMHHYSPSFRNSTTP--KSPRLITDKEGYGFGGSARFG--RVGIRMK 455
                       H   HY   F++ +TP  KSP L++D+EG GFGGS  FG     I   
Sbjct: 98  -----------GHPTMHY---FKSPSTPPRKSPFLLSDREGSGFGGSTIFGGGSGAIHSN 143

Query: 454 SKASHD----GSSLVSCHKCGEQFGKWEAVEAHHLSKHAVTELVEGDSSRKIVEIICRTS 287
           ++AS D    G+S V+CHKCGEQF KWEAVE HHLSKHAVTELVEGDSSRKIVEIICRTS
Sbjct: 144 NRASLDTDSNGTSAVTCHKCGEQFSKWEAVETHHLSKHAVTELVEGDSSRKIVEIICRTS 203

Query: 286 WLKSENNCGRIERVLKVHNMQKTLSRFEEYREMVKIKASKLPKKHPRCLADGNELLRFYG 107
           WLKSEN+CGRIERVLKVHNMQKTL RFEEYREMVK KASKLPKKHPRCLADGNELLRFYG
Sbjct: 204 WLKSENHCGRIERVLKVHNMQKTLGRFEEYREMVKTKASKLPKKHPRCLADGNELLRFYG 263

Query: 106 TTVACSLGTNGSSSLCISEKCSVCRIIRHGFSTKK 2
           TT+ C+LG NGSS+LCIS+KC VCRIIRHGFS KK
Sbjct: 264 TTMTCALGVNGSSNLCISDKCCVCRIIRHGFSAKK 298


Top