BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00008330
         (543 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002330082.1| predicted protein [Populus trichocarpa] gi|2...   262   3e-68
ref|XP_004135765.1| PREDICTED: pentatricopeptide repeat-containi...   256   2e-66
ref|XP_004170418.1| PREDICTED: pentatricopeptide repeat-containi...   255   3e-66
emb|CBI39605.3| unnamed protein product [Vitis vinifera]              251   4e-65
ref|XP_002281942.1| PREDICTED: pentatricopeptide repeat-containi...   251   4e-65

>ref|XP_002330082.1| predicted protein [Populus trichocarpa] gi|222871507|gb|EEF08638.1|
           predicted protein [Populus trichocarpa]
          Length = 665

 Score =  262 bits (669), Expect = 3e-68
 Identities = 128/180 (71%), Positives = 151/180 (83%)
 Frame = +1

Query: 1   AGHLTEAEEFIRFMPMKSNAAVWGALLGACRIHGNVELAEKVGKLLLELDPQNSGRYALL 180
           AG L EAEE +  MPM+ +AAVWGALLGACR HG+VEL E+VGK+LLEL+PQNSGRYALL
Sbjct: 443 AGLLGEAEEVMYSMPMEPSAAVWGALLGACRKHGDVELGERVGKILLELEPQNSGRYALL 502

Query: 181 SNIYAKAGRWDEVAQVRKLMKEMGIKTTPGSSSIDLDGVLHRFVMGDGSHSQMKEIYLML 360
           SNIYA+AGRWD+VA VRKLMKE G+KT+ G S ID DGV+H F MGDGSH QMK IYLML
Sbjct: 503 SNIYARAGRWDDVANVRKLMKERGVKTSTGISMIDFDGVVHEFKMGDGSHPQMKNIYLML 562

Query: 361 EEILERLRSEGHVPNTTQVLFDIVEEEKETALRYHSEKLAIAFGILNTTPGATIRIVNSL 540
           + +++RL+ EG  PNT+QVLFDI EEEKE  L+YHSEKLAIAFG++NT PG TI +V +L
Sbjct: 563 KNMIKRLKMEGFSPNTSQVLFDIEEEEKEAELQYHSEKLAIAFGLINTKPGTTIHVVKNL 622


>ref|XP_004135765.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g48910-like [Cucumis sativus]
          Length = 666

 Score =  256 bits (654), Expect = 2e-66
 Identities = 125/180 (69%), Positives = 149/180 (82%)
 Frame = +1

Query: 1   AGHLTEAEEFIRFMPMKSNAAVWGALLGACRIHGNVELAEKVGKLLLELDPQNSGRYALL 180
           +G  +EAE+ I  MPMK NAAVWGALLGACRIHGN +LAE+VGK+LLEL+PQNSGRY LL
Sbjct: 444 SGLFSEAEDLINSMPMKPNAAVWGALLGACRIHGNFDLAERVGKILLELEPQNSGRYVLL 503

Query: 181 SNIYAKAGRWDEVAQVRKLMKEMGIKTTPGSSSIDLDGVLHRFVMGDGSHSQMKEIYLML 360
           SNIYAK GR+D+V+++RKLMK+ GIKT PG S +DL+G +H F MGDGSH QMKEIY  L
Sbjct: 504 SNIYAKVGRFDDVSKIRKLMKDRGIKTVPGVSIVDLNGTVHEFKMGDGSHPQMKEIYRKL 563

Query: 361 EEILERLRSEGHVPNTTQVLFDIVEEEKETALRYHSEKLAIAFGILNTTPGATIRIVNSL 540
           + I ERL+  GH P+T+QVLFDI EEEKETA+ YHSEKLAIAFG++NT PG  I IV +L
Sbjct: 564 KIIKERLQMAGHSPDTSQVLFDIDEEEKETAVNYHSEKLAIAFGLINTLPGKRIHIVKNL 623


>ref|XP_004170418.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g48910-like [Cucumis sativus]
          Length = 666

 Score =  255 bits (652), Expect = 3e-66
 Identities = 125/180 (69%), Positives = 148/180 (82%)
 Frame = +1

Query: 1   AGHLTEAEEFIRFMPMKSNAAVWGALLGACRIHGNVELAEKVGKLLLELDPQNSGRYALL 180
           +G  +EAE+ I  MPMK NAAVWGALLGACRIHGN +LAE+VGK+LLEL+PQNSGRY LL
Sbjct: 444 SGLFSEAEDLINSMPMKPNAAVWGALLGACRIHGNFDLAERVGKILLELEPQNSGRYVLL 503

Query: 181 SNIYAKAGRWDEVAQVRKLMKEMGIKTTPGSSSIDLDGVLHRFVMGDGSHSQMKEIYLML 360
           SNIYAK GR+D+V+++RKLMK  GIKT PG S +DL+G +H F MGDGSH QMKEIY  L
Sbjct: 504 SNIYAKVGRFDDVSKIRKLMKNRGIKTVPGVSIVDLNGTVHEFKMGDGSHPQMKEIYRKL 563

Query: 361 EEILERLRSEGHVPNTTQVLFDIVEEEKETALRYHSEKLAIAFGILNTTPGATIRIVNSL 540
           + I ERL+  GH P+T+QVLFDI EEEKETA+ YHSEKLAIAFG++NT PG  I IV +L
Sbjct: 564 KIIKERLQMAGHSPDTSQVLFDIDEEEKETAVNYHSEKLAIAFGLINTLPGKRIHIVKNL 623


>emb|CBI39605.3| unnamed protein product [Vitis vinifera]
          Length = 624

 Score =  251 bits (642), Expect = 4e-65
 Identities = 124/181 (68%), Positives = 152/181 (83%), Gaps = 1/181 (0%)
 Frame = +1

Query: 1   AGHLTEAEEFIRFMPMKSNAAVWGALLGACRIHGNVELAEKVGKLLLELDPQNSGRYALL 180
           AG LTEAE+ +  +P +   AVWGALLGACR HGNVEL E+VGK+LLEL+PQNSGRY LL
Sbjct: 401 AGLLTEAEKVVSSIPTEPTPAVWGALLGACRKHGNVELGERVGKILLELEPQNSGRYTLL 460

Query: 181 SNIYAKAGRWDEVAQVRKLMKEMGIKTTPGSSSIDLD-GVLHRFVMGDGSHSQMKEIYLM 357
           SNIYAKAGRW+EV +VRKLMKE GIKTTPG+S IDL  G +H+F++GDGSH Q+K+IY M
Sbjct: 461 SNIYAKAGRWEEVGEVRKLMKERGIKTTPGTSIIDLGRGEVHKFIIGDGSHPQVKDIYQM 520

Query: 358 LEEILERLRSEGHVPNTTQVLFDIVEEEKETALRYHSEKLAIAFGILNTTPGATIRIVNS 537
           L+++ ERL+ EG+ P+ +QVLFDI EEEKETA+  HSEKLAI FG++NT+PG TIRIV +
Sbjct: 521 LDKVKERLQMEGYEPDPSQVLFDIDEEEKETAVWQHSEKLAIGFGLINTSPGTTIRIVKN 580

Query: 538 L 540
           L
Sbjct: 581 L 581


>ref|XP_002281942.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48910
           isoform 1 [Vitis vinifera]
          Length = 672

 Score =  251 bits (642), Expect = 4e-65
 Identities = 124/181 (68%), Positives = 152/181 (83%), Gaps = 1/181 (0%)
 Frame = +1

Query: 1   AGHLTEAEEFIRFMPMKSNAAVWGALLGACRIHGNVELAEKVGKLLLELDPQNSGRYALL 180
           AG LTEAE+ +  +P +   AVWGALLGACR HGNVEL E+VGK+LLEL+PQNSGRY LL
Sbjct: 449 AGLLTEAEKVVSSIPTEPTPAVWGALLGACRKHGNVELGERVGKILLELEPQNSGRYTLL 508

Query: 181 SNIYAKAGRWDEVAQVRKLMKEMGIKTTPGSSSIDLD-GVLHRFVMGDGSHSQMKEIYLM 357
           SNIYAKAGRW+EV +VRKLMKE GIKTTPG+S IDL  G +H+F++GDGSH Q+K+IY M
Sbjct: 509 SNIYAKAGRWEEVGEVRKLMKERGIKTTPGTSIIDLGRGEVHKFIIGDGSHPQVKDIYQM 568

Query: 358 LEEILERLRSEGHVPNTTQVLFDIVEEEKETALRYHSEKLAIAFGILNTTPGATIRIVNS 537
           L+++ ERL+ EG+ P+ +QVLFDI EEEKETA+  HSEKLAI FG++NT+PG TIRIV +
Sbjct: 569 LDKVKERLQMEGYEPDPSQVLFDIDEEEKETAVWQHSEKLAIGFGLINTSPGTTIRIVKN 628

Query: 538 L 540
           L
Sbjct: 629 L 629