BLASTX nr result

ID: Coptis21_contig00008321 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00008321
         (1578 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284113.1| PREDICTED: transcription factor bHLH63-like ...   370   e-100
ref|XP_002313791.1| predicted protein [Populus trichocarpa] gi|2...   347   5e-93
ref|XP_002512912.1| conserved hypothetical protein [Ricinus comm...   335   3e-89
emb|CBI37656.3| unnamed protein product [Vitis vinifera]              326   9e-87
ref|XP_004173629.1| PREDICTED: transcription factor bHLH63-like ...   323   8e-86

>ref|XP_002284113.1| PREDICTED: transcription factor bHLH63-like [Vitis vinifera]
          Length = 456

 Score =  370 bits (951), Expect = e-100
 Identities = 237/465 (50%), Positives = 296/465 (63%), Gaps = 37/465 (7%)
 Frame = +1

Query: 40   VMNSTLTEMLHHTTQA--------EMSVLER----LKFQTQQNVSVSEQLQQTYFSDTQF 183
            +MN    EMLH  + +        +M+V ER    +K+Q +Q     +Q QQ+YF   +F
Sbjct: 1    MMNMASPEMLHCLSTSGNVAGNGTDMTVFERQRVRMKWQQEQFQQQQQQQQQSYFGGNEF 60

Query: 184  NLMPN----------QGLMTNEMA-IRELVNRSIKMDPAGLENGWPDFAKYPLSGAGFGS 330
            ++              GL+  + A + +L+ R++K DP GLEN WP+F K  + G GF  
Sbjct: 61   SMFSMGGQVGQAQQFHGLINGDSAGVGDLLGRAVKADP-GLENVWPEFGKLTMPGTGFNV 119

Query: 331  ETTGFGSVENGYGGNGVDLVDYSLSRTSSCPTAMLEGRSVELGLSGKIGSVGGRESVKKR 510
            E  GF S       +G ++ +++ SRTSSCP A  E +  E  L  KI S  GRES KKR
Sbjct: 120  ENAGFESA-GILNCSGFEM-NHTTSRTSSCPLAAAEAKVRESVLPEKIASAVGRESFKKR 177

Query: 511  KADKAQSSKVAAEE-IRNKRMKGDSEE-ESKITEQXXXXXXXXXXXXXXXX-------KE 663
            KADK QS KV AEE  ++KR+KG +E+ ESKITE                        +E
Sbjct: 178  KADKVQSPKVVAEEETKDKRIKGCAEDGESKITEANNNKNSTTTTTTTATTTTTNNNNRE 237

Query: 664  TSADSVKEKSKASGDKSDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNK 843
            TSAD+ K        K DYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNK
Sbjct: 238  TSADTSKVSEV---QKPDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNK 294

Query: 844  ITGKAGMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIESLFTKESFPS-STSFP-IG 1017
            ITGKAGMLDEIINYVQSLQRQVEFLSMKLA VNPRLDFNI++   KE FP+ + +FP IG
Sbjct: 295  ITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNIDNFLAKEVFPACAANFPTIG 354

Query: 1018 TAPELSNCAAYLPFNSLQQMVXXXXXXXXXXXXELALQRTRSAP--LPDAFIDTSCFTQT 1191
             + E++N  +YL ++ +QQ V            E+AL+RT SAP  +PD F+D SCFTQ 
Sbjct: 355  MSSEMTN-PSYLHYDPIQQ-VATCGVEMGINPAEIALRRTISAPVSIPDTFLD-SCFTQI 411

Query: 1192 QPSSTWETDLQNLYNVEFNQGRSPAFPPQ-SFTGILEANNLKMEM 1323
            QPSSTW+ DLQNLY  EF+QGR  +FP Q +FTG ++A+NLKMEM
Sbjct: 412  QPSSTWDADLQNLYGPEFHQGRLMSFPSQAAFTGPIDASNLKMEM 456


>ref|XP_002313791.1| predicted protein [Populus trichocarpa] gi|222850199|gb|EEE87746.1|
            predicted protein [Populus trichocarpa]
          Length = 439

 Score =  347 bits (890), Expect = 5e-93
 Identities = 224/444 (50%), Positives = 282/444 (63%), Gaps = 24/444 (5%)
 Frame = +1

Query: 64   MLHHTTQAEMSVLER----LKFQTQQNVSVSEQLQQ---TYFSDTQFNLMPNQGLMTNEM 222
            MLH T   +++VLER    +K+Q +Q      QLQQ   +YF++    +    G   +E 
Sbjct: 15   MLHCT---DITVLERQRACIKWQQEQQQQQQVQLQQQEISYFTELT-GVFQQAGF--HEG 68

Query: 223  AIRELVNRSIKMDPAGLENGWPDFAKYPLSGAGFGSETTGFGSVENGYGGNGVDLVDYSL 402
             + E+V RS+K DP  ++NGW +                G G       G+G +L   ++
Sbjct: 69   GLSEVVTRSVKPDPGLVDNGWNN------------DHVVGLGVGPLYDNGSGFELNYGAI 116

Query: 403  SRTSSCPTAMLEG------RSVELGLSGKIGSVGGRESVKKRKADKAQS-SKVAAEE-IR 558
            SR SSCP A +        +  E  +S KI S  GRES KKRK D  Q+ SKV AEE  R
Sbjct: 117  SRISSCPPAAVAAVAAATVKGSESVVSDKISSGVGRESSKKRKVDNKQNNSKVDAEEDTR 176

Query: 559  NKRMKGDSEE-ESKITEQXXXXXXXXXXXXXXXX--KETSADSVKEKSKASG-DKSDYIH 726
            +KR+KG +EE ESKITE+                  KE+SA + K+ SK +   K DYIH
Sbjct: 177  DKRIKGCAEEGESKITEKNNNKNSRNNNTNKNNNSNKESSAGNSKDNSKVTEVQKPDYIH 236

Query: 727  VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 906
            VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ
Sbjct: 237  VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 296

Query: 907  VEFLSMKLATVNPRLDFNIESLFTKESFPS-STSFP-IGTAPELSNCAAYLPFN-SLQQM 1077
            VEFLSMKLA VNPRLDFN ++LF +E+FP+ S +FP IG + +++N  AYL FN + QQ+
Sbjct: 297  VEFLSMKLAAVNPRLDFNFDNLFAREAFPACSVNFPTIGMSSDMTN-PAYLQFNPAQQQL 355

Query: 1078 VXXXXXXXXXXXXELALQRTRSAP--LPDAFIDTSCFTQTQPSSTWETDLQNLYNVEFNQ 1251
            V            ++ L+RT S+P  +P+ F+D+SCFTQ  P   W+ DLQNLYNV F+Q
Sbjct: 356  VTCCGLDMGTDPPDMGLKRTTSSPESIPETFLDSSCFTQAHPPPAWDADLQNLYNVAFDQ 415

Query: 1252 GRSPAFPPQSFTGILEANNLKMEM 1323
            GR  +FP Q FTG +EA+NLKMEM
Sbjct: 416  GRQTSFPTQPFTGSIEASNLKMEM 439


>ref|XP_002512912.1| conserved hypothetical protein [Ricinus communis]
            gi|223547923|gb|EEF49415.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 444

 Score =  335 bits (858), Expect = 3e-89
 Identities = 225/462 (48%), Positives = 285/462 (61%), Gaps = 39/462 (8%)
 Frame = +1

Query: 55   LTEMLHHTTQAEMSVLER----LKFQTQQNVSVSEQLQQTYFSDTQFNLMPNQGLMTNEM 222
            L EMLH T   +++VLER    LK+Q +Q     EQ Q  +     + L    G+   + 
Sbjct: 6    LPEMLHCT---DLTVLERQRARLKWQQEQQHLQLEQHQHQHHQGENYFLGDLSGVFQLQQ 62

Query: 223  A----------IRELVNRSIKMDPAGLENG-WPDFAKYPLSGAGFGSETTGFGSVENGYG 369
                       + E+V RS+K DP  L+NG W + +   L G G      GFG++     
Sbjct: 63   QQQQQQGFQGDLGEVVIRSVKPDPGFLDNGCWSNTSSTDLVGYG----PCGFGNM----- 113

Query: 370  GNGVDLVDYSLSRTSSCPTAMLEGRSV-----ELGLSGKIGSVGGRESVKKRKADKAQSS 534
                   ++++SRTSSCP  + +   V     E  +S K+    G ES KKRK DK Q++
Sbjct: 114  -------NFAISRTSSCPPTVADAGPVLVKGRESVVSEKLTCGVGSESTKKRKVDKVQNN 166

Query: 535  -KVAAEE--IRNKRMKGDSEE-ESK-ITEQXXXXXXXXXXXXXXXXKETSADSVKEKSKA 699
             KV AE+   R+KR+K  +EE ESK ITE+                KE SA++ K+ SK 
Sbjct: 167  TKVVAEDDNCRDKRIKVCAEEGESKMITEKNNNNKSSSSKNSN---KENSAETSKDNSKV 223

Query: 700  SG-DKSDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEI 876
            +   K DYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEI
Sbjct: 224  TEVQKPDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEI 283

Query: 877  INYVQSLQRQVEFLSMKLATVNPRLDFNIESLFTKESF-PSSTSFP-IGTAPELSNCAAY 1050
            INYVQSLQRQVEFLSMKLA VNPRLDFNI++L  KE+F P  T+FP IG + +++N  AY
Sbjct: 284  INYVQSLQRQVEFLSMKLAAVNPRLDFNIDNLIAKETFPPCPTNFPAIGLSSDMTN-PAY 342

Query: 1051 LPFNSL---------QQMVXXXXXXXXXXXXELALQRTRSAP--LPDAFIDTSCFTQTQP 1197
            L FN +         QQ+V            ++ ++RT SAP  +P+++ID+SCF Q Q 
Sbjct: 343  LQFNPVQQQQQQQQQQQLVTCCGLDMGINNPDMGIRRTISAPVSIPESYIDSSCFNQIQS 402

Query: 1198 SSTWETDLQNLYNVEFNQGRSPAFPPQSFTGILEANNLKMEM 1323
            SSTW+ DLQNLYNV F+QGRS +FP Q FTG ++A NLKMEM
Sbjct: 403  SSTWDADLQNLYNVAFDQGRSTSFPTQPFTGAIDAGNLKMEM 444


>emb|CBI37656.3| unnamed protein product [Vitis vinifera]
          Length = 345

 Score =  326 bits (836), Expect = 9e-87
 Identities = 202/353 (57%), Positives = 240/353 (67%), Gaps = 14/353 (3%)
 Frame = +1

Query: 307  LSGAGFGSETTGFGSVENGYGGNGVDLVDYSLSRTSSCPTAMLEGRSVELGLSGKIGSVG 486
            + G GF  E  GF S       +G ++ +++ SRTSSCP A  E +  E  L  KI S  
Sbjct: 1    MPGTGFNVENAGFESA-GILNCSGFEM-NHTTSRTSSCPLAAAEAKVRESVLPEKIASAV 58

Query: 487  GRESVKKRKADKAQSSKVAAEE-IRNKRMKGDSEE-ESKITEQXXXXXXXXXXXXXXXX- 657
            GRES KKRKADK QS KV AEE  ++KR+KG +E+ ESKITE                  
Sbjct: 59   GRESFKKRKADKVQSPKVVAEEETKDKRIKGCAEDGESKITEANNNKNSTTTTTTTATTT 118

Query: 658  ------KETSADSVKEKSKASGDKSDYIHVRARRGQATDSHSLAERVRREKISERMKYLQ 819
                  +ETSAD+ K        K DYIHVRARRGQATDSHSLAERVRREKISERMKYLQ
Sbjct: 119  TTNNNNRETSADTSKVSEV---QKPDYIHVRARRGQATDSHSLAERVRREKISERMKYLQ 175

Query: 820  DLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIESLFTKESFPS- 996
            DLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLA VNPRLDFNI++   KE FP+ 
Sbjct: 176  DLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNIDNFLAKEVFPAC 235

Query: 997  STSFP-IGTAPELSNCAAYLPFNSLQQMVXXXXXXXXXXXXELALQRTRSAP--LPDAFI 1167
            + +FP IG + E++N  +YL ++ +QQ V            E+AL+RT SAP  +PD F+
Sbjct: 236  AANFPTIGMSSEMTN-PSYLHYDPIQQ-VATCGVEMGINPAEIALRRTISAPVSIPDTFL 293

Query: 1168 DTSCFTQTQPSSTWETDLQNLYNVEFNQGRSPAFPPQ-SFTGILEANNLKMEM 1323
            D SCFTQ QPSSTW+ DLQNLY  EF+QGR  +FP Q +FTG ++A+NLKMEM
Sbjct: 294  D-SCFTQIQPSSTWDADLQNLYGPEFHQGRLMSFPSQAAFTGPIDASNLKMEM 345


>ref|XP_004173629.1| PREDICTED: transcription factor bHLH63-like [Cucumis sativus]
          Length = 456

 Score =  323 bits (828), Expect = 8e-86
 Identities = 223/479 (46%), Positives = 276/479 (57%), Gaps = 51/479 (10%)
 Frame = +1

Query: 40   VMNSTLTEMLHHTTQA-----EMSVLER--LKFQTQQNVSVSEQLQQTYFSDTQFN---- 186
            +MN  L EMLH           +SVLER   + + QQ++   + L Q+ FS   +     
Sbjct: 1    MMNRALPEMLHCLNSTGNCSDTLSVLERQRARLKWQQDMLFQQPLNQSCFSRADYGGGFP 60

Query: 187  ---------------LMPNQGLMTNEMAIRELVNRSIKMDPAGLENGWPDFAKYPLSGAG 321
                            M   G +   ++  E+V  ++K DP GLE+GW +  K+  S   
Sbjct: 61   PPVSVPADHLTGFPGYMSGGGGVGGGLSHVEMVMGAVKPDP-GLEDGWSEMGKFDPSLL- 118

Query: 322  FGSETTGFGSVENGYGGNGVDLVDYSLSRTSSCPTAMLEGRSVELGLSGKIGSVGGRESV 501
                                +L + SLSRTSSC         V   ++ K+GS+ GRES 
Sbjct: 119  --------------LNPTACEL-NSSLSRTSSCLPV------VAPTVAEKMGSMAGRESF 157

Query: 502  KKRKADKAQSS---------KVAAEEIRN-----KRMKGDSEEE-SKITEQXXXXXXXXX 636
            KKRKA+KA ++         KV  EE  N     KR+K  SE E SK T+Q         
Sbjct: 158  KKRKAEKAHNTTTTANTNNNKVTVEEDENNNSKEKRIKTSSEGELSKTTDQNGTKNNSTI 217

Query: 637  XXXXXXXKETSADSVKEKSKASG-DKSDYIHVRARRGQATDSHSLAERVRREKISERMKY 813
                   +ETSAD+ KE SKAS   K DYIHVRARRGQATDSHSLAER RREKISERMKY
Sbjct: 218  TTTTNNNRETSADTSKENSKASEVQKPDYIHVRARRGQATDSHSLAERARREKISERMKY 277

Query: 814  LQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIESLFTKESFP 993
            LQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLA VNPRLDFN++ LF KE FP
Sbjct: 278  LQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDDLFNKEVFP 337

Query: 994  SS---TSFPI--GTAPELSNCAAYLPFN-SLQQMVXXXXXXXXXXXXELALQRTRSAPL- 1152
             S    +FP   G + E+++ ++YL FN + QQM              +AL+RT SAP+ 
Sbjct: 338  PSCTAANFPSVGGMSSEMTDPSSYLQFNPNNQQMDSCCGLEMGINTSHVALRRTISAPVS 397

Query: 1153 -PDAFIDTSCFTQTQPSSTWETDLQNLYNVEFNQGRSP-AFPPQSFTGILEANNLKMEM 1323
             P+ F+D+SC TQ QPSS W+ DLQN+YNV F+QGRS  AF    +TG +EA N+KMEM
Sbjct: 398  FPENFLDSSCLTQFQPSSGWDVDLQNMYNVGFDQGRSSNAFSSHPYTGSIEAGNIKMEM 456


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