BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00008315
         (1504 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521945.1| Poly(rC)-binding protein, putative [Ricinus ...   538   e-154
emb|CBI35182.3| unnamed protein product [Vitis vinifera]              535   e-154
ref|XP_002269249.1| PREDICTED: poly(rC)-binding protein 3-like [...   535   e-154
ref|XP_004139248.1| PREDICTED: poly(rC)-binding protein 3-like [...   526   e-149
ref|XP_003521747.1| PREDICTED: KH domain-containing protein At4g...   521   e-147

>ref|XP_002521945.1| Poly(rC)-binding protein, putative [Ricinus communis]
            gi|223538749|gb|EEF40349.1| Poly(rC)-binding protein,
            putative [Ricinus communis]
          Length = 548

 Score =  538 bits (1385), Expect(2) = e-154
 Identities = 267/381 (70%), Positives = 315/381 (82%), Gaps = 2/381 (0%)
 Frame = +3

Query: 135  HEGTTIAPGYSPTQQIEEKNDVAGVVVAEKRWPGWPGENVYRMLVPVQKVGGIIGRKGEL 314
            H    +   Y   ++  + + V+G +  EK+WPGWPGE+V+RMLVP QKVG IIGRKGE 
Sbjct: 116  HATDQVPENYQAQEKGHDADTVSGGI--EKKWPGWPGESVFRMLVPAQKVGSIIGRKGEF 173

Query: 315  IKKMCEETKARIKILDAPPGTQERAVMVSAKEEPDASIPPAIDGLLRVHSRVVDGLNGDL 494
            IKK+ EET+ARIKILD PPGT ERAVMVSAKEEPD+++PPA+DGLLRVH R+VDGL+GD 
Sbjct: 174  IKKIVEETRARIKILDGPPGTTERAVMVSAKEEPDSALPPAMDGLLRVHKRIVDGLDGDS 233

Query: 495  AHAPPNSGLTVSSRLLVVATQAGNLIGKQGATIKSIQEASNTIVRVLGSEDLPVFALEDD 674
            +HA   +G  VS+RLLV A+QAG+LIGKQG T+KSIQEAS+ +VRVLG+EDLPVFAL+DD
Sbjct: 234  SHASSGTGTKVSTRLLVPASQAGSLIGKQGGTVKSIQEASSCVVRVLGAEDLPVFALQDD 293

Query: 675  RIVEVQGEPAGVHKAVELIAAHLRKFLVDRSVIGLFEMHMQMLNSQMEPNMPPHQSWG-P 851
            R+VEV G+ AGVHKAVELIA+HLRKFLVDRS+I LFEMHMQM N     +MPPHQSWG P
Sbjct: 294  RVVEVLGDAAGVHKAVELIASHLRKFLVDRSIIPLFEMHMQMQNPPHMEHMPPHQSWGPP 353

Query: 852  HGYPPNAGPGPAFGVNPQYMPPPRQHDNYYPQHD-HPPMDKQPHQGLSMYGREAPMGFHP 1028
             G PPNAG GP +G NPQYMPPPRQ +NYYP  D  PPM+KQPHQG+S YGREAPMG H 
Sbjct: 354  QGIPPNAGGGPGYG-NPQYMPPPRQIENYYPPADLPPPMEKQPHQGISAYGREAPMGVHG 412

Query: 1029 SANAQPPPALMTPITHHMQIPLSFADAVIGNAGANISYIRRVSGAAITVQETRGVPGEMT 1208
            S+N+Q  P+++T IT  MQIPLS+ADAVIG AG +ISYIRR SGA +T+QETRGVPGEMT
Sbjct: 413  SSNSQAAPSMITQITQQMQIPLSYADAVIGTAGTSISYIRRASGATVTIQETRGVPGEMT 472

Query: 1209 VEINGSASQAQTAQQLIQNFM 1271
            VEI+G+ASQ QTAQQLIQNFM
Sbjct: 473  VEISGTASQVQTAQQLIQNFM 493



 Score = 34.7 bits (78), Expect(2) = e-154
 Identities = 18/37 (48%), Positives = 23/37 (62%), Gaps = 4/37 (10%)
 Frame = +1

Query: 1345 QNFMAEAAS--QNPVGGAADPGYNSYSTQN--FSSPP 1443
            QNFMAEA +  Q   GG+ D GYN Y+     ++SPP
Sbjct: 490  QNFMAEAGAPTQAQTGGSTDQGYNPYAAHGSVYASPP 526


>emb|CBI35182.3| unnamed protein product [Vitis vinifera]
          Length = 511

 Score =  535 bits (1378), Expect(2) = e-154
 Identities = 268/374 (71%), Positives = 309/374 (82%), Gaps = 2/374 (0%)
 Frame = +3

Query: 156  PGYSPTQQIEEKNDVAGVVVAEKRWPGWPGENVYRMLVPVQKVGGIIGRKGELIKKMCEE 335
            P  S  QQ   ++D + +   EKRWPGWPGE+V+RMLVP QKVG IIGRKGE IKK+ EE
Sbjct: 86   PEDSQPQQKRGRDDDSAIGGGEKRWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEE 145

Query: 336  TKARIKILDAPPGTQERAVMVSAKEEPDASIPPAIDGLLRVHSRVVDGLNGDLAHAPPNS 515
            T+ARIKILD PPGT ERAVMVSAKEEPD+S+PPA+DGLL+VH R+VDGL GD +H PP  
Sbjct: 146  TRARIKILDGPPGTAERAVMVSAKEEPDSSLPPAMDGLLKVHKRIVDGLEGDSSHMPP-- 203

Query: 516  GLTVSSRLLVVATQAGNLIGKQGATIKSIQEASNTIVRVLGSEDLPVFALEDDRIVEVQG 695
            G  VS+RLLV A+QAG+LIGKQG T+KSIQEASN IVRVLG+EDLP+FAL+DDR+VEV G
Sbjct: 204  GGKVSTRLLVAASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPIFALQDDRVVEVVG 263

Query: 696  EPAGVHKAVELIAAHLRKFLVDRSVIGLFEMHMQMLNSQMEPNMPPHQSWGP-HGYPPNA 872
            EP GVHKAVELIA+HLRKFLVDRSVI LFEM MQM N  +E +MPPHQ WGP  G PPNA
Sbjct: 264  EPIGVHKAVELIASHLRKFLVDRSVIPLFEMQMQMSNPPIE-HMPPHQPWGPPQGLPPNA 322

Query: 873  GPGPAFGVNPQYMPPPRQHDNYYPQHD-HPPMDKQPHQGLSMYGREAPMGFHPSANAQPP 1049
              GP FG NP YMPPPRQ D+YYP  +  PP++KQPHQG+S YGRE PMG H  ++AQP 
Sbjct: 323  SGGPGFGPNPPYMPPPRQLDSYYPPPELPPPVEKQPHQGISAYGREVPMGGHAPSSAQPA 382

Query: 1050 PALMTPITHHMQIPLSFADAVIGNAGANISYIRRVSGAAITVQETRGVPGEMTVEINGSA 1229
            P+++T +T  MQIPLS+ADAVIG AGA+ISYIRR SGA +T+QETRGVPGEMTVEING+A
Sbjct: 383  PSMITQVTQQMQIPLSYADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEINGTA 442

Query: 1230 SQAQTAQQLIQNFM 1271
            SQ Q AQQLIQNFM
Sbjct: 443  SQVQAAQQLIQNFM 456



 Score = 37.0 bits (84), Expect(2) = e-154
 Identities = 20/36 (55%), Positives = 25/36 (69%), Gaps = 4/36 (11%)
 Frame = +1

Query: 1345 QNFMAEAAS--QNPVGGAADPGYNSYSTQN--FSSP 1440
            QNFMAEAA+  Q   GG+AD GYNSY+     ++SP
Sbjct: 453  QNFMAEAAAPAQAQAGGSADQGYNSYAAHGSMYASP 488


>ref|XP_002269249.1| PREDICTED: poly(rC)-binding protein 3-like [Vitis vinifera]
          Length = 442

 Score =  535 bits (1378), Expect(2) = e-154
 Identities = 268/374 (71%), Positives = 309/374 (82%), Gaps = 2/374 (0%)
 Frame = +3

Query: 156  PGYSPTQQIEEKNDVAGVVVAEKRWPGWPGENVYRMLVPVQKVGGIIGRKGELIKKMCEE 335
            P  S  QQ   ++D + +   EKRWPGWPGE+V+RMLVP QKVG IIGRKGE IKK+ EE
Sbjct: 17   PEDSQPQQKRGRDDDSAIGGGEKRWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEE 76

Query: 336  TKARIKILDAPPGTQERAVMVSAKEEPDASIPPAIDGLLRVHSRVVDGLNGDLAHAPPNS 515
            T+ARIKILD PPGT ERAVMVSAKEEPD+S+PPA+DGLL+VH R+VDGL GD +H PP  
Sbjct: 77   TRARIKILDGPPGTAERAVMVSAKEEPDSSLPPAMDGLLKVHKRIVDGLEGDSSHMPP-- 134

Query: 516  GLTVSSRLLVVATQAGNLIGKQGATIKSIQEASNTIVRVLGSEDLPVFALEDDRIVEVQG 695
            G  VS+RLLV A+QAG+LIGKQG T+KSIQEASN IVRVLG+EDLP+FAL+DDR+VEV G
Sbjct: 135  GGKVSTRLLVAASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPIFALQDDRVVEVVG 194

Query: 696  EPAGVHKAVELIAAHLRKFLVDRSVIGLFEMHMQMLNSQMEPNMPPHQSWGP-HGYPPNA 872
            EP GVHKAVELIA+HLRKFLVDRSVI LFEM MQM N  +E +MPPHQ WGP  G PPNA
Sbjct: 195  EPIGVHKAVELIASHLRKFLVDRSVIPLFEMQMQMSNPPIE-HMPPHQPWGPPQGLPPNA 253

Query: 873  GPGPAFGVNPQYMPPPRQHDNYYPQHD-HPPMDKQPHQGLSMYGREAPMGFHPSANAQPP 1049
              GP FG NP YMPPPRQ D+YYP  +  PP++KQPHQG+S YGRE PMG H  ++AQP 
Sbjct: 254  SGGPGFGPNPPYMPPPRQLDSYYPPPELPPPVEKQPHQGISAYGREVPMGGHAPSSAQPA 313

Query: 1050 PALMTPITHHMQIPLSFADAVIGNAGANISYIRRVSGAAITVQETRGVPGEMTVEINGSA 1229
            P+++T +T  MQIPLS+ADAVIG AGA+ISYIRR SGA +T+QETRGVPGEMTVEING+A
Sbjct: 314  PSMITQVTQQMQIPLSYADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEINGTA 373

Query: 1230 SQAQTAQQLIQNFM 1271
            SQ Q AQQLIQNFM
Sbjct: 374  SQVQAAQQLIQNFM 387



 Score = 37.0 bits (84), Expect(2) = e-154
 Identities = 20/36 (55%), Positives = 25/36 (69%), Gaps = 4/36 (11%)
 Frame = +1

Query: 1345 QNFMAEAAS--QNPVGGAADPGYNSYSTQN--FSSP 1440
            QNFMAEAA+  Q   GG+AD GYNSY+     ++SP
Sbjct: 384  QNFMAEAAAPAQAQAGGSADQGYNSYAAHGSMYASP 419


>ref|XP_004139248.1| PREDICTED: poly(rC)-binding protein 3-like [Cucumis sativus]
          Length = 483

 Score =  526 bits (1356), Expect(2) = e-149
 Identities = 266/360 (73%), Positives = 305/360 (84%), Gaps = 6/360 (1%)
 Frame = +3

Query: 210  VVAEKRWPGWPGENVYRMLVPVQKVGGIIGRKGELIKKMCEETKARIKILDAPPGTQERA 389
            VV+EK+WPGWPGE+V+RMLVP QKVG IIGRKGE IKK+ EET+ARIKILD PPGT ERA
Sbjct: 72   VVSEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTAERA 131

Query: 390  VMVSAKEEPDASIPPAIDGLLRVHSRVVDGLNGDLAHAPPNSGLTVSSRLLVVATQAGNL 569
            VMVSAK+EPD++ PPA+DGLLRVH R+VDGL GD AHA PN+G  VS+RLLV A+QAG+L
Sbjct: 132  VMVSAKDEPDSAFPPAVDGLLRVHKRIVDGLEGDNAHA-PNAGSKVSTRLLVAASQAGSL 190

Query: 570  IGKQGATIKSIQEASNTIVRVLGSEDLPVFALEDDRIVEVQGEPAGVHKAVELIAAHLRK 749
            IGKQG T+KSIQE SN IVRVLGSEDLPVFAL+DDR+VEV G+PAGVHKAVELIA+HLRK
Sbjct: 191  IGKQGGTVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDPAGVHKAVELIASHLRK 250

Query: 750  FLVDRSVIGLFEMHMQMLNSQMEPNM--PPHQSWG-PHGYPPNAGPGPAFGVN-PQYM-P 914
            FLVDRS+I +FEM+MQM N QM+ +M  PPHQ WG P G PPNAG GP FG N PQYM P
Sbjct: 251  FLVDRSIIPVFEMNMQMSNPQMDQHMPPPPHQPWGPPQGMPPNAGGGPGFGPNPPQYMPP 310

Query: 915  PPRQHDNYYPQHD-HPPMDKQPHQGLSMYGREAPMGFHPSANAQPPPALMTPITHHMQIP 1091
            PPRQ DNYYP  +    M+KQPH G+S YGREAPMG H ++NAQ  P+++T  T  MQIP
Sbjct: 311  PPRQFDNYYPPAEMQAVMEKQPHHGISAYGREAPMGVHAASNAQSAPSIVTQTTQQMQIP 370

Query: 1092 LSFADAVIGNAGANISYIRRVSGAAITVQETRGVPGEMTVEINGSASQAQTAQQLIQNFM 1271
            LSFADAVIG AGA+ISYIRR SGA +T+QETRGVPGEMTVE++G+ASQ Q AQQLIQNFM
Sbjct: 371  LSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTASQVQAAQQLIQNFM 430



 Score = 30.4 bits (67), Expect(2) = e-149
 Identities = 17/37 (45%), Positives = 22/37 (59%), Gaps = 4/37 (10%)
 Frame = +1

Query: 1345 QNFMAEAAS--QNPVGGAADPGYNSYSTQN--FSSPP 1443
            QNFMA A +  Q   G + D GYNSY+     ++SPP
Sbjct: 427  QNFMAGAGAPAQPQAGVSTDQGYNSYAAHGSVYASPP 463


>ref|XP_003521747.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine max]
          Length = 443

 Score =  521 bits (1341), Expect(2) = e-147
 Identities = 255/371 (68%), Positives = 304/371 (81%), Gaps = 5/371 (1%)
 Frame = +3

Query: 174  QQIEEKNDVAG---VVVAEKRWPGWPGENVYRMLVPVQKVGGIIGRKGELIKKMCEETKA 344
            + IE + +V G    VVAEK+WPGWPGE+V+RMLVP QKVGGIIGRKGE IKK+ EET+A
Sbjct: 16   ETIEIEAEVHGGEEAVVAEKKWPGWPGESVFRMLVPAQKVGGIIGRKGEFIKKIVEETRA 75

Query: 345  RIKILDAPPGTQERAVMVSAKEEPDASIPPAIDGLLRVHSRVVDGLNGDLAHAPPNSGLT 524
            R+KILD PPGT +RAVM+SAKEEP +S+PPA+DGLLR+H R++DGL  D  HAP      
Sbjct: 76   RVKILDGPPGTVQRAVMISAKEEPGSSVPPAVDGLLRIHKRIIDGLESDFTHAPSGVAGK 135

Query: 525  VSSRLLVVATQAGNLIGKQGATIKSIQEASNTIVRVLGSEDLPVFALEDDRIVEVQGEPA 704
            VS++LLV A+QAG+LIGKQG T+KSIQEASN IVRVLG+EDLP+FAL+DDR+VEV G+PA
Sbjct: 136  VSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPIFALQDDRVVEVVGDPA 195

Query: 705  GVHKAVELIAAHLRKFLVDRSVIGLFEMHMQMLNSQMEPNMPPHQSWGP-HGYPPNAGPG 881
            GVHKA+ELIA+HLRKFLVDR VI +FEM+MQ  N     +MPPHQSWGP  G PPN G G
Sbjct: 196  GVHKALELIASHLRKFLVDRGVIPIFEMNMQTANPHHAEHMPPHQSWGPSQGLPPNVGGG 255

Query: 882  PAFGVNPQYMPPPRQHDNYYPQHD-HPPMDKQPHQGLSMYGREAPMGFHPSANAQPPPAL 1058
            P FG   QYMPPPRQ D+YYP  +  PP+D+QPHQG+S YGR+A +G H S+N Q  P++
Sbjct: 256  PGFGPPSQYMPPPRQLDSYYPSAEMPPPVDRQPHQGISAYGRDASIGVHASSNTQSAPSI 315

Query: 1059 MTPITHHMQIPLSFADAVIGNAGANISYIRRVSGAAITVQETRGVPGEMTVEINGSASQA 1238
            +T IT  MQIPLS+ADAVIG AGA+ISYIRR SGA +T+QE RGVPGEMTVEI+G+ASQ 
Sbjct: 316  VTQITQQMQIPLSYADAVIGTAGASISYIRRASGATVTIQEARGVPGEMTVEISGTASQV 375

Query: 1239 QTAQQLIQNFM 1271
            QTAQQLIQNFM
Sbjct: 376  QTAQQLIQNFM 386



 Score = 30.4 bits (67), Expect(2) = e-147
 Identities = 19/42 (45%), Positives = 22/42 (52%), Gaps = 9/42 (21%)
 Frame = +1

Query: 1345 QNFMAEAASQNPVGG-------AADPGYNSYSTQN--FSSPP 1443
            QNFMAEAA+             AAD GYNSY      ++SPP
Sbjct: 383  QNFMAEAAAAAAAPAQPQTTVPAADQGYNSYPAHGSVYASPP 424