BLASTX nr result

ID: Coptis21_contig00008313 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00008313
         (1421 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526458.1| conserved hypothetical protein [Ricinus comm...   221   4e-55
emb|CBI29711.3| unnamed protein product [Vitis vinifera]              221   5e-55
ref|XP_002328775.1| predicted protein [Populus trichocarpa] gi|2...   214   4e-53
ref|XP_002331110.1| predicted protein [Populus trichocarpa] gi|2...   205   2e-50
ref|XP_002869724.1| hypothetical protein ARALYDRAFT_492419 [Arab...   200   7e-49

>ref|XP_002526458.1| conserved hypothetical protein [Ricinus communis]
            gi|223534238|gb|EEF35953.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 230

 Score =  221 bits (563), Expect = 4e-55
 Identities = 126/229 (55%), Positives = 148/229 (64%), Gaps = 5/229 (2%)
 Frame = -1

Query: 1247 SSESDSDDQNVQIQTTTIPS---PSLPQRAITQTLTSTAXXXXXXXXXXXXXXXXXXXXX 1077
            SS S SDD   + +T   PS   PSL QRAI+QTLTSTA                     
Sbjct: 24   SSSSASDDHLHEPETPKSPSRSSPSLSQRAISQTLTSTA--------------------- 62

Query: 1076 TANLANLLPTGTLLAFQLLLPTFTNNGSCTSGARXXXXXXXXXXXXXXXXXXXTDSFKTQ 897
              NLANLLPTGTLLAFQLL P FTNNG+C S  R                   TDS K+ 
Sbjct: 63   --NLANLLPTGTLLAFQLLTPIFTNNGACDSVTRPMTLCLLALLAISCFLSSFTDSVKSS 120

Query: 896  EG-QVYYGLVTFKGMWLFDYPG-TASSLPDLSKYRIRLIDGVHAVLSVFIFVAIALRDAN 723
            +G QVYYG+ TFKG++LFD P    + L DLSKY+IR IDGVH+VLSV +F+A ALRD N
Sbjct: 121  DGKQVYYGIATFKGIFLFDCPDPVGAGLKDLSKYKIRFIDGVHSVLSVLVFIAFALRDKN 180

Query: 722  VLRCFYPNPEQETQDILSIAPVGISVICGLLFVVFPTRRHGIGYPCSSG 576
            V+ CFYP P+ ETQ++L+IAPVGI +IC LLFVVFPTRRHGIGYP ++G
Sbjct: 181  VVSCFYPMPKHETQEVLNIAPVGIGLICSLLFVVFPTRRHGIGYPVTAG 229


>emb|CBI29711.3| unnamed protein product [Vitis vinifera]
          Length = 238

 Score =  221 bits (562), Expect = 5e-55
 Identities = 129/270 (47%), Positives = 157/270 (58%), Gaps = 19/270 (7%)
 Frame = -1

Query: 1340 LFFLKSQVLNQLNMSLRTRP----NSIXXXXXTGLSSESDSDDQNVQ------IQTTTIP 1191
            LF    ++ + L M+LR RP              ++  S SDD+ V          +  P
Sbjct: 5    LFMFFCELSSSLKMALRARPVTSKQPSESEETLKITQTSSSDDEEVSDLPKPYSSLSPPP 64

Query: 1190 SPS------LPQRAITQTLTSTAXXXXXXXXXXXXXXXXXXXXXTANLANLLPTGTLLAF 1029
            SPS      L QRA++QTL STA                       NLANLLPTGTLLAF
Sbjct: 65   SPSSSAPSTLRQRALSQTLASTA-----------------------NLANLLPTGTLLAF 101

Query: 1028 QLLLPTFTNNGSCTSGARXXXXXXXXXXXXXXXXXXXTDSFKTQEGQVYYGLVTFKGMWL 849
            QLL P FTNNG+C +  R                    DSFKT +G+V+YG+ TFKG+WL
Sbjct: 102  QLLTPVFTNNGACDAVTRFT------------------DSFKTPDGRVFYGIATFKGLWL 143

Query: 848  FDY---PGTASSLPDLSKYRIRLIDGVHAVLSVFIFVAIALRDANVLRCFYPNPEQETQD 678
            FDY    G+A+SLPDLSKY+ R IDGVHAVLSV +FVA+A+RD NV+ CFYP P +E Q+
Sbjct: 144  FDYVDESGSAASLPDLSKYKFRFIDGVHAVLSVLVFVAVAMRDKNVVSCFYPQPAREVQE 203

Query: 677  ILSIAPVGISVICGLLFVVFPTRRHGIGYP 588
            +L I PVGI +IC LLFVVFPT RHGIGYP
Sbjct: 204  VLDIVPVGIGLICSLLFVVFPTTRHGIGYP 233


>ref|XP_002328775.1| predicted protein [Populus trichocarpa] gi|222839073|gb|EEE77424.1|
            predicted protein [Populus trichocarpa]
          Length = 230

 Score =  214 bits (545), Expect = 4e-53
 Identities = 126/252 (50%), Positives = 155/252 (61%), Gaps = 10/252 (3%)
 Frame = -1

Query: 1301 MSLRTRPNSIXXXXXTGLSSESDS------DDQNVQIQTTTIPS--PSLPQRAITQTLTS 1146
            MSLR R  S        +S++S S      +  NVQ +T   PS  P+L QRAI+QTLTS
Sbjct: 1    MSLRPRTTSTKQLSIPEVSTQSSSSTTSNDNSNNVQPETPKSPSRPPTLSQRAISQTLTS 60

Query: 1145 TAXXXXXXXXXXXXXXXXXXXXXTANLANLLPTGTLLAFQLLLPTFTNNGSCTSGARXXX 966
            TA                       NLANLLPTGTLLAFQLL P FTNNG+C S  R   
Sbjct: 61   TA-----------------------NLANLLPTGTLLAFQLLTPFFTNNGACDSATRPMT 97

Query: 965  XXXXXXXXXXXXXXXXTDSFKTQ-EGQVYYGLVTFKGMWLFDYPGTASS-LPDLSKYRIR 792
                            TDS ++  +G+VYYGL +FKGM+LFD P  A+S L DLSK+++ 
Sbjct: 98   LILLALLALSCFLASFTDSVRSPTDGRVYYGLASFKGMYLFDCPDPAASGLVDLSKFKMG 157

Query: 791  LIDGVHAVLSVFIFVAIALRDANVLRCFYPNPEQETQDILSIAPVGISVICGLLFVVFPT 612
             ID VHAVLSV +F+++ALR+ NVL CFYP P+ ETQ++LSI P+G+ +IC LLFVVFPT
Sbjct: 158  FIDVVHAVLSVLVFISVALREKNVLSCFYPMPKHETQEVLSIVPIGVGLICSLLFVVFPT 217

Query: 611  RRHGIGYPCSSG 576
            RRHGIGYP   G
Sbjct: 218  RRHGIGYPVVQG 229


>ref|XP_002331110.1| predicted protein [Populus trichocarpa] gi|222872838|gb|EEF09969.1|
            predicted protein [Populus trichocarpa]
          Length = 233

 Score =  205 bits (522), Expect = 2e-50
 Identities = 127/255 (49%), Positives = 148/255 (58%), Gaps = 13/255 (5%)
 Frame = -1

Query: 1301 MSLRTRP------NSIXXXXXTGLSSESDSDDQNVQIQTTTIP-SPSLP----QRAITQT 1155
            MSLR R       +SI     TG SS + S+D  +       P SPS P    QRAI+QT
Sbjct: 1    MSLRPRTTPSSKKSSIPAEISTGSSSSATSNDNYINKNEPETPKSPSRPPTFSQRAISQT 60

Query: 1154 LTSTAXXXXXXXXXXXXXXXXXXXXXTANLANLLPTGTLLAFQLLLPTFTNNGSCTSGAR 975
            LTSTA                       NLANLLPTGTLLAFQ+L P FTNNG+C S   
Sbjct: 61   LTSTA-----------------------NLANLLPTGTLLAFQILTPIFTNNGACDSATA 97

Query: 974  XXXXXXXXXXXXXXXXXXXTDSFKTQ-EGQVYYGLVTFKGMWLFDYPG-TASSLPDLSKY 801
                               TDS K+  +GQVYYG  T KGM+LFD P    S L DLSK 
Sbjct: 98   PMTSVLLALLAVSCFLGSFTDSVKSPTDGQVYYGFATLKGMFLFDCPDPVGSGLSDLSKL 157

Query: 800  RIRLIDGVHAVLSVFIFVAIALRDANVLRCFYPNPEQETQDILSIAPVGISVICGLLFVV 621
            ++R ID VHAVLSV +FVA+ALRD NVL CFYP P+ ETQ++L + PVGI +IC LLF+ 
Sbjct: 158  KLRFIDVVHAVLSVLVFVAVALRDKNVLSCFYPMPKHETQEVLDVIPVGIGLICSLLFMA 217

Query: 620  FPTRRHGIGYPCSSG 576
            FPTRRHGIGYP + G
Sbjct: 218  FPTRRHGIGYPVTPG 232


>ref|XP_002869724.1| hypothetical protein ARALYDRAFT_492419 [Arabidopsis lyrata subsp.
            lyrata] gi|297315560|gb|EFH45983.1| hypothetical protein
            ARALYDRAFT_492419 [Arabidopsis lyrata subsp. lyrata]
          Length = 213

 Score =  200 bits (509), Expect = 7e-49
 Identities = 99/163 (60%), Positives = 114/163 (69%), Gaps = 1/163 (0%)
 Frame = -1

Query: 1073 ANLANLLPTGTLLAFQLLLPTFTNNGSCTSGARXXXXXXXXXXXXXXXXXXXTDSFKTQE 894
            ANLANLLPTGTLLAF LL+P FT+NGSC    R                   TDS K ++
Sbjct: 43   ANLANLLPTGTLLAFTLLIPVFTSNGSCDYPTRVLTAGLLTLLSISCFLSSFTDSVKAED 102

Query: 893  GQVYYGLVTFKGMWLFDYPGTAS-SLPDLSKYRIRLIDGVHAVLSVFIFVAIALRDANVL 717
            G VYYG  T KGMW+FDYP      LPDLSKYRIR+ID +HAVLSV +F A+ALRD N +
Sbjct: 103  GNVYYGFATRKGMWIFDYPDPDGLGLPDLSKYRIRIIDWIHAVLSVLVFGAVALRDKNAV 162

Query: 716  RCFYPNPEQETQDILSIAPVGISVICGLLFVVFPTRRHGIGYP 588
             CFYP PEQET+ +L I P+G+ VICGLLF+VFP RRHGIGYP
Sbjct: 163  SCFYPAPEQETKKVLDIVPMGVGVICGLLFLVFPARRHGIGYP 205


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