BLASTX nr result
ID: Coptis21_contig00008304
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00008304 (939 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002518017.1| Vesicle transport protein SFT2B, putative [R... 127 2e-57 ref|XP_002270756.1| PREDICTED: vesicle transport protein SFT2B [... 121 2e-55 ref|XP_004147336.1| PREDICTED: vesicle transport protein SFT2B-l... 120 9e-55 ref|XP_002305352.1| predicted protein [Populus trichocarpa] gi|2... 122 3e-54 gb|AFK46692.1| unknown [Medicago truncatula] 122 1e-53 >ref|XP_002518017.1| Vesicle transport protein SFT2B, putative [Ricinus communis] gi|223542999|gb|EEF44535.1| Vesicle transport protein SFT2B, putative [Ricinus communis] Length = 174 Score = 127 bits (319), Expect(2) = 2e-57 Identities = 63/90 (70%), Positives = 72/90 (80%), Gaps = 2/90 (2%) Frame = +2 Query: 32 MERMNQAMEKMKILVG--IXXXXXXXXXXXSSFMDEFNRNCTLSTTQRLYGFATCLVAGL 205 ME+M +AMEKMK+LVG + +SF+D+FNRNCTLST QRLYGFA C +GL Sbjct: 1 MEKMKEAMEKMKMLVGLEVEDEEPAAAEESASFLDDFNRNCTLSTKQRLYGFAICFFSGL 60 Query: 206 ACTLLSMLVFFNPIKFGITFTFGNLLSLGS 295 ACTLLSMLVFFNP+KFGITFTFGNLLSLGS Sbjct: 61 ACTLLSMLVFFNPVKFGITFTFGNLLSLGS 90 Score = 122 bits (307), Expect(2) = 2e-57 Identities = 61/84 (72%), Positives = 67/84 (79%) Frame = +3 Query: 288 SGAFLIGPKRQLTMMLDPVRIYATATYXXXXXXXXXXXXXVHNKLLTLVAIVLEFGALIW 467 S AFLIGPKRQ+TMMLDPVRIYATA + VHNKLLTL+AIVLEFGAL+W Sbjct: 90 STAFLIGPKRQVTMMLDPVRIYATALFLASIIIALFCALYVHNKLLTLLAIVLEFGALVW 149 Query: 468 YSLSYIPFARSMVSKIMTTCFDSE 539 YSLSYIPFARSMVSK+M CFD+E Sbjct: 150 YSLSYIPFARSMVSKVMLACFDTE 173 >ref|XP_002270756.1| PREDICTED: vesicle transport protein SFT2B [Vitis vinifera] gi|296084822|emb|CBI27704.3| unnamed protein product [Vitis vinifera] Length = 177 Score = 121 bits (304), Expect(2) = 2e-55 Identities = 62/84 (73%), Positives = 67/84 (79%) Frame = +3 Query: 288 SGAFLIGPKRQLTMMLDPVRIYATATYXXXXXXXXXXXXXVHNKLLTLVAIVLEFGALIW 467 S AFLIGPKRQ+TMMLDPVRIYATA Y V NKLLTL+AI+LEFGALIW Sbjct: 93 STAFLIGPKRQVTMMLDPVRIYATAIYLASIIIALFCALYVRNKLLTLLAIMLEFGALIW 152 Query: 468 YSLSYIPFARSMVSKIMTTCFDSE 539 YSLSYIPFARSMVSKIM +CFD+E Sbjct: 153 YSLSYIPFARSMVSKIMVSCFDTE 176 Score = 121 bits (303), Expect(2) = 2e-55 Identities = 62/93 (66%), Positives = 69/93 (74%), Gaps = 5/93 (5%) Frame = +2 Query: 32 MERMNQAMEKMKILVGIXXXXXXXXXXXS-----SFMDEFNRNCTLSTTQRLYGFATCLV 196 ME+MN A E++KILVG+ SFMD+FNR+CTLST QR YGFA CL Sbjct: 1 MEKMNHAFERVKILVGMEVDDDQNVAAPPDDGPFSFMDDFNRDCTLSTKQRFYGFAICLA 60 Query: 197 AGLACTLLSMLVFFNPIKFGITFTFGNLLSLGS 295 AGL CTLLSMLVFFNPIKFGITFTFGNLL+LGS Sbjct: 61 AGLTCTLLSMLVFFNPIKFGITFTFGNLLALGS 93 >ref|XP_004147336.1| PREDICTED: vesicle transport protein SFT2B-like [Cucumis sativus] gi|449508719|ref|XP_004163391.1| PREDICTED: vesicle transport protein SFT2B-like [Cucumis sativus] Length = 179 Score = 120 bits (302), Expect(2) = 9e-55 Identities = 59/84 (70%), Positives = 67/84 (79%) Frame = +3 Query: 288 SGAFLIGPKRQLTMMLDPVRIYATATYXXXXXXXXXXXXXVHNKLLTLVAIVLEFGALIW 467 S AFLIGPKRQ+TMMLDPVRIYATA Y VHNKLLTL++++LEFGALIW Sbjct: 95 STAFLIGPKRQVTMMLDPVRIYATAIYLASMIFALFGALYVHNKLLTLLSLILEFGALIW 154 Query: 468 YSLSYIPFARSMVSKIMTTCFDSE 539 YSLSYIPFARSMVSK+M +C D+E Sbjct: 155 YSLSYIPFARSMVSKVMVSCLDTE 178 Score = 120 bits (300), Expect(2) = 9e-55 Identities = 61/95 (64%), Positives = 68/95 (71%), Gaps = 7/95 (7%) Frame = +2 Query: 32 MERMNQAMEKMKILVGIXXXXXXXXXXX-------SSFMDEFNRNCTLSTTQRLYGFATC 190 ME+MNQA EKMK+LVG+ S FMD+FNRNCTLST QR YGFA C Sbjct: 1 MEKMNQAFEKMKMLVGVEVDDEREASTATIDDGSSSWFMDDFNRNCTLSTKQRFYGFAIC 60 Query: 191 LVAGLACTLLSMLVFFNPIKFGITFTFGNLLSLGS 295 VAG+ CTL+SMLVFFNPIKFGI FT GN+LSLGS Sbjct: 61 FVAGVTCTLMSMLVFFNPIKFGIAFTLGNMLSLGS 95 >ref|XP_002305352.1| predicted protein [Populus trichocarpa] gi|222848316|gb|EEE85863.1| predicted protein [Populus trichocarpa] Length = 177 Score = 122 bits (305), Expect(2) = 3e-54 Identities = 61/84 (72%), Positives = 67/84 (79%) Frame = +3 Query: 288 SGAFLIGPKRQLTMMLDPVRIYATATYXXXXXXXXXXXXXVHNKLLTLVAIVLEFGALIW 467 S AFLIGPKRQ++MMLDPVRIYATA Y VHNKLLTL+AI+LEFGALIW Sbjct: 93 STAFLIGPKRQVSMMLDPVRIYATALYLASIIIALLCALYVHNKLLTLLAIILEFGALIW 152 Query: 468 YSLSYIPFARSMVSKIMTTCFDSE 539 YSLSYIPFAR+MVSKIM CFD+E Sbjct: 153 YSLSYIPFARAMVSKIMLACFDTE 176 Score = 117 bits (292), Expect(2) = 3e-54 Identities = 59/93 (63%), Positives = 68/93 (73%), Gaps = 5/93 (5%) Frame = +2 Query: 32 MERMNQAMEKMKILVGIXXXXXXXXXXXS-----SFMDEFNRNCTLSTTQRLYGFATCLV 196 M++MNQA EK+K+LVG+ +FMD+FNR+CTLST QR YGFA C Sbjct: 1 MQKMNQAFEKVKMLVGMEVEDEEEGVATVESSSFTFMDDFNRDCTLSTKQRFYGFAICFS 60 Query: 197 AGLACTLLSMLVFFNPIKFGITFTFGNLLSLGS 295 GLAC LLSMLVFFNP+KFGITFTFGNLLSLGS Sbjct: 61 TGLACVLLSMLVFFNPVKFGITFTFGNLLSLGS 93 >gb|AFK46692.1| unknown [Medicago truncatula] Length = 178 Score = 122 bits (305), Expect(2) = 1e-53 Identities = 60/84 (71%), Positives = 67/84 (79%) Frame = +3 Query: 288 SGAFLIGPKRQLTMMLDPVRIYATATYXXXXXXXXXXXXXVHNKLLTLVAIVLEFGALIW 467 S AFLIGPKRQ++MMLDPVRIYATA Y VHNKLLT +AI+LEFGAL+W Sbjct: 94 STAFLIGPKRQVSMMLDPVRIYATAIYIASMIIALFCALYVHNKLLTFLAIILEFGALVW 153 Query: 468 YSLSYIPFARSMVSKIMTTCFDSE 539 YSLSYIPFARSMVSKIM +CFD+E Sbjct: 154 YSLSYIPFARSMVSKIMVSCFDTE 177 Score = 115 bits (287), Expect(2) = 1e-53 Identities = 59/94 (62%), Positives = 67/94 (71%), Gaps = 6/94 (6%) Frame = +2 Query: 32 MERMNQAMEKMKILVGIXXXXXXXXXXXS------SFMDEFNRNCTLSTTQRLYGFATCL 193 ME+MN+A EK+KI+VG+ +FMD+FNRNCTLS TQRLYGFA C Sbjct: 1 MEKMNKAFEKVKIMVGMEVEDEEAQAAALENESSFAFMDDFNRNCTLSRTQRLYGFAICF 60 Query: 194 VAGLACTLLSMLVFFNPIKFGITFTFGNLLSLGS 295 AG+ CTLLSMLVF PIKFGITFT GNLLSLGS Sbjct: 61 AAGVTCTLLSMLVFLKPIKFGITFTLGNLLSLGS 94