BLASTX nr result

ID: Coptis21_contig00008304 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00008304
         (939 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518017.1| Vesicle transport protein SFT2B, putative [R...   127   2e-57
ref|XP_002270756.1| PREDICTED: vesicle transport protein SFT2B [...   121   2e-55
ref|XP_004147336.1| PREDICTED: vesicle transport protein SFT2B-l...   120   9e-55
ref|XP_002305352.1| predicted protein [Populus trichocarpa] gi|2...   122   3e-54
gb|AFK46692.1| unknown [Medicago truncatula]                          122   1e-53

>ref|XP_002518017.1| Vesicle transport protein SFT2B, putative [Ricinus communis]
           gi|223542999|gb|EEF44535.1| Vesicle transport protein
           SFT2B, putative [Ricinus communis]
          Length = 174

 Score =  127 bits (319), Expect(2) = 2e-57
 Identities = 63/90 (70%), Positives = 72/90 (80%), Gaps = 2/90 (2%)
 Frame = +2

Query: 32  MERMNQAMEKMKILVG--IXXXXXXXXXXXSSFMDEFNRNCTLSTTQRLYGFATCLVAGL 205
           ME+M +AMEKMK+LVG  +           +SF+D+FNRNCTLST QRLYGFA C  +GL
Sbjct: 1   MEKMKEAMEKMKMLVGLEVEDEEPAAAEESASFLDDFNRNCTLSTKQRLYGFAICFFSGL 60

Query: 206 ACTLLSMLVFFNPIKFGITFTFGNLLSLGS 295
           ACTLLSMLVFFNP+KFGITFTFGNLLSLGS
Sbjct: 61  ACTLLSMLVFFNPVKFGITFTFGNLLSLGS 90



 Score =  122 bits (307), Expect(2) = 2e-57
 Identities = 61/84 (72%), Positives = 67/84 (79%)
 Frame = +3

Query: 288 SGAFLIGPKRQLTMMLDPVRIYATATYXXXXXXXXXXXXXVHNKLLTLVAIVLEFGALIW 467
           S AFLIGPKRQ+TMMLDPVRIYATA +             VHNKLLTL+AIVLEFGAL+W
Sbjct: 90  STAFLIGPKRQVTMMLDPVRIYATALFLASIIIALFCALYVHNKLLTLLAIVLEFGALVW 149

Query: 468 YSLSYIPFARSMVSKIMTTCFDSE 539
           YSLSYIPFARSMVSK+M  CFD+E
Sbjct: 150 YSLSYIPFARSMVSKVMLACFDTE 173


>ref|XP_002270756.1| PREDICTED: vesicle transport protein SFT2B [Vitis vinifera]
           gi|296084822|emb|CBI27704.3| unnamed protein product
           [Vitis vinifera]
          Length = 177

 Score =  121 bits (304), Expect(2) = 2e-55
 Identities = 62/84 (73%), Positives = 67/84 (79%)
 Frame = +3

Query: 288 SGAFLIGPKRQLTMMLDPVRIYATATYXXXXXXXXXXXXXVHNKLLTLVAIVLEFGALIW 467
           S AFLIGPKRQ+TMMLDPVRIYATA Y             V NKLLTL+AI+LEFGALIW
Sbjct: 93  STAFLIGPKRQVTMMLDPVRIYATAIYLASIIIALFCALYVRNKLLTLLAIMLEFGALIW 152

Query: 468 YSLSYIPFARSMVSKIMTTCFDSE 539
           YSLSYIPFARSMVSKIM +CFD+E
Sbjct: 153 YSLSYIPFARSMVSKIMVSCFDTE 176



 Score =  121 bits (303), Expect(2) = 2e-55
 Identities = 62/93 (66%), Positives = 69/93 (74%), Gaps = 5/93 (5%)
 Frame = +2

Query: 32  MERMNQAMEKMKILVGIXXXXXXXXXXXS-----SFMDEFNRNCTLSTTQRLYGFATCLV 196
           ME+MN A E++KILVG+                 SFMD+FNR+CTLST QR YGFA CL 
Sbjct: 1   MEKMNHAFERVKILVGMEVDDDQNVAAPPDDGPFSFMDDFNRDCTLSTKQRFYGFAICLA 60

Query: 197 AGLACTLLSMLVFFNPIKFGITFTFGNLLSLGS 295
           AGL CTLLSMLVFFNPIKFGITFTFGNLL+LGS
Sbjct: 61  AGLTCTLLSMLVFFNPIKFGITFTFGNLLALGS 93


>ref|XP_004147336.1| PREDICTED: vesicle transport protein SFT2B-like [Cucumis sativus]
           gi|449508719|ref|XP_004163391.1| PREDICTED: vesicle
           transport protein SFT2B-like [Cucumis sativus]
          Length = 179

 Score =  120 bits (302), Expect(2) = 9e-55
 Identities = 59/84 (70%), Positives = 67/84 (79%)
 Frame = +3

Query: 288 SGAFLIGPKRQLTMMLDPVRIYATATYXXXXXXXXXXXXXVHNKLLTLVAIVLEFGALIW 467
           S AFLIGPKRQ+TMMLDPVRIYATA Y             VHNKLLTL++++LEFGALIW
Sbjct: 95  STAFLIGPKRQVTMMLDPVRIYATAIYLASMIFALFGALYVHNKLLTLLSLILEFGALIW 154

Query: 468 YSLSYIPFARSMVSKIMTTCFDSE 539
           YSLSYIPFARSMVSK+M +C D+E
Sbjct: 155 YSLSYIPFARSMVSKVMVSCLDTE 178



 Score =  120 bits (300), Expect(2) = 9e-55
 Identities = 61/95 (64%), Positives = 68/95 (71%), Gaps = 7/95 (7%)
 Frame = +2

Query: 32  MERMNQAMEKMKILVGIXXXXXXXXXXX-------SSFMDEFNRNCTLSTTQRLYGFATC 190
           ME+MNQA EKMK+LVG+                  S FMD+FNRNCTLST QR YGFA C
Sbjct: 1   MEKMNQAFEKMKMLVGVEVDDEREASTATIDDGSSSWFMDDFNRNCTLSTKQRFYGFAIC 60

Query: 191 LVAGLACTLLSMLVFFNPIKFGITFTFGNLLSLGS 295
            VAG+ CTL+SMLVFFNPIKFGI FT GN+LSLGS
Sbjct: 61  FVAGVTCTLMSMLVFFNPIKFGIAFTLGNMLSLGS 95


>ref|XP_002305352.1| predicted protein [Populus trichocarpa] gi|222848316|gb|EEE85863.1|
           predicted protein [Populus trichocarpa]
          Length = 177

 Score =  122 bits (305), Expect(2) = 3e-54
 Identities = 61/84 (72%), Positives = 67/84 (79%)
 Frame = +3

Query: 288 SGAFLIGPKRQLTMMLDPVRIYATATYXXXXXXXXXXXXXVHNKLLTLVAIVLEFGALIW 467
           S AFLIGPKRQ++MMLDPVRIYATA Y             VHNKLLTL+AI+LEFGALIW
Sbjct: 93  STAFLIGPKRQVSMMLDPVRIYATALYLASIIIALLCALYVHNKLLTLLAIILEFGALIW 152

Query: 468 YSLSYIPFARSMVSKIMTTCFDSE 539
           YSLSYIPFAR+MVSKIM  CFD+E
Sbjct: 153 YSLSYIPFARAMVSKIMLACFDTE 176



 Score =  117 bits (292), Expect(2) = 3e-54
 Identities = 59/93 (63%), Positives = 68/93 (73%), Gaps = 5/93 (5%)
 Frame = +2

Query: 32  MERMNQAMEKMKILVGIXXXXXXXXXXXS-----SFMDEFNRNCTLSTTQRLYGFATCLV 196
           M++MNQA EK+K+LVG+                 +FMD+FNR+CTLST QR YGFA C  
Sbjct: 1   MQKMNQAFEKVKMLVGMEVEDEEEGVATVESSSFTFMDDFNRDCTLSTKQRFYGFAICFS 60

Query: 197 AGLACTLLSMLVFFNPIKFGITFTFGNLLSLGS 295
            GLAC LLSMLVFFNP+KFGITFTFGNLLSLGS
Sbjct: 61  TGLACVLLSMLVFFNPVKFGITFTFGNLLSLGS 93


>gb|AFK46692.1| unknown [Medicago truncatula]
          Length = 178

 Score =  122 bits (305), Expect(2) = 1e-53
 Identities = 60/84 (71%), Positives = 67/84 (79%)
 Frame = +3

Query: 288 SGAFLIGPKRQLTMMLDPVRIYATATYXXXXXXXXXXXXXVHNKLLTLVAIVLEFGALIW 467
           S AFLIGPKRQ++MMLDPVRIYATA Y             VHNKLLT +AI+LEFGAL+W
Sbjct: 94  STAFLIGPKRQVSMMLDPVRIYATAIYIASMIIALFCALYVHNKLLTFLAIILEFGALVW 153

Query: 468 YSLSYIPFARSMVSKIMTTCFDSE 539
           YSLSYIPFARSMVSKIM +CFD+E
Sbjct: 154 YSLSYIPFARSMVSKIMVSCFDTE 177



 Score =  115 bits (287), Expect(2) = 1e-53
 Identities = 59/94 (62%), Positives = 67/94 (71%), Gaps = 6/94 (6%)
 Frame = +2

Query: 32  MERMNQAMEKMKILVGIXXXXXXXXXXXS------SFMDEFNRNCTLSTTQRLYGFATCL 193
           ME+MN+A EK+KI+VG+                  +FMD+FNRNCTLS TQRLYGFA C 
Sbjct: 1   MEKMNKAFEKVKIMVGMEVEDEEAQAAALENESSFAFMDDFNRNCTLSRTQRLYGFAICF 60

Query: 194 VAGLACTLLSMLVFFNPIKFGITFTFGNLLSLGS 295
            AG+ CTLLSMLVF  PIKFGITFT GNLLSLGS
Sbjct: 61  AAGVTCTLLSMLVFLKPIKFGITFTLGNLLSLGS 94


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