BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00008291
         (1227 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281066.1| PREDICTED: pre-mRNA-splicing factor SPF27 ho...   355   2e-95
ref|XP_002322083.1| predicted protein [Populus trichocarpa] gi|2...   333   7e-89
ref|XP_003631066.1| Pre-mRNA-splicing factor SPF27-like protein ...   331   2e-88
ref|XP_004137495.1| PREDICTED: pre-mRNA-splicing factor SPF27 ho...   331   3e-88
gb|AFK38781.1| unknown [Lotus japonicus]                              323   7e-86

>ref|XP_002281066.1| PREDICTED: pre-mRNA-splicing factor SPF27 homolog [Vitis vinifera]
          Length = 256

 Score =  355 bits (910), Expect = 2e-95
 Identities = 175/250 (70%), Positives = 200/250 (80%)
 Frame = -3

Query: 1225 MEKNGDILMIEAAPPKTSLSGIAREEIIDALPYIDDDYGDPKVKAEVDKLVEEEMRRSTK 1046
            M  +GDILM+EA PP+ S       E IDALPYIDDDYG PKVK EVD+LVE+EMRRS+K
Sbjct: 1    MANDGDILMLEA-PPQASRPA----EFIDALPYIDDDYGHPKVKEEVDRLVEDEMRRSSK 55

Query: 1045 KPSDFLKNFPVAAKSNFENHPMLAREYERVRAGKPPATMDTSRYTLQPPSENKRSDSNAW 866
            KPSDFLK+ P      F NHPMLAREYERVRAGKPP  +D SRY L+ P  NKR+D  AW
Sbjct: 56   KPSDFLKDLPPLPPFGFHNHPMLAREYERVRAGKPPVALDMSRYGLEMPPMNKRNDETAW 115

Query: 865  KQHLETAQSSLQHQVIRLENLDLMSKHGGDIWKHHNQRLEAFLSRMQAIALGYNERIEVV 686
            K  L+ AQ  LQHQVIRLENL+LMSKHG D+WK HNQRLEA+LSRMQA+A+  NE+IE V
Sbjct: 116  KHALQKAQRLLQHQVIRLENLELMSKHGADVWKQHNQRLEAYLSRMQALAMEQNEKIETV 175

Query: 685  NRERKYHQQKTAVELNALSTQWKELCEKNIDIQAACANIENHIEDLRREAVDRGWNLEAN 506
            NRERKYHQQ TA ELNALS QWKELCEKNI+I+ ACA IEN+IE+LRREA +RGWNL+AN
Sbjct: 176  NRERKYHQQNTAFELNALSAQWKELCEKNIEIRTACAKIENNIEELRREAAERGWNLDAN 235

Query: 505  MENGPSLHSE 476
            ++NG   HSE
Sbjct: 236  IDNGSLSHSE 245


>ref|XP_002322083.1| predicted protein [Populus trichocarpa] gi|222869079|gb|EEF06210.1|
            predicted protein [Populus trichocarpa]
          Length = 255

 Score =  333 bits (853), Expect = 7e-89
 Identities = 165/248 (66%), Positives = 197/248 (79%), Gaps = 2/248 (0%)
 Frame = -3

Query: 1216 NGDILMIEAAPPKTS-LSGIAREEIIDALPYIDDDYGDPKVKAEVDKLVEEEMRRSTKKP 1040
            NGD+LM+EAAP  +   S  +  EIIDALPYIDDDYG+P VKAEVD+LVEEEMRRS+KKP
Sbjct: 8    NGDMLMLEAAPEASRPWSTSSNAEIIDALPYIDDDYGNPSVKAEVDRLVEEEMRRSSKKP 67

Query: 1039 SDFLKNFPVAAKSNFENHPMLAREYERVRAGKPPATMDTSRYT-LQPPSENKRSDSNAWK 863
            SDFLK  P   K  FEN+PMLA+EYERVRAG+PP T+D SRY+ L  P+ NK +D  AWK
Sbjct: 68   SDFLKELPPVPKFTFENYPMLAKEYERVRAGRPPVTLDFSRYSHLDLPAANKMNDETAWK 127

Query: 862  QHLETAQSSLQHQVIRLENLDLMSKHGGDIWKHHNQRLEAFLSRMQAIALGYNERIEVVN 683
            Q L+ AQ  LQHQVIRLENL+LMSK+G ++W  HN++LE  L+R Q +A   NE+IE VN
Sbjct: 128  QALQRAQRLLQHQVIRLENLELMSKYGPEVWIQHNRQLETMLTRTQKLAREQNEKIEAVN 187

Query: 682  RERKYHQQKTAVELNALSTQWKELCEKNIDIQAACANIENHIEDLRREAVDRGWNLEANM 503
            RERKYHQQ TA ELNALS QWKELC+KNI+IQ AC  IEN IE+L+RE+ +RGWN+EAN+
Sbjct: 188  RERKYHQQNTAYELNALSAQWKELCQKNIEIQEACIKIENQIEELKRESSERGWNVEANI 247

Query: 502  ENGPSLHS 479
            ENG  LHS
Sbjct: 248  ENGSLLHS 255


>ref|XP_003631066.1| Pre-mRNA-splicing factor SPF27-like protein [Medicago truncatula]
            gi|355525088|gb|AET05542.1| Pre-mRNA-splicing factor
            SPF27-like protein [Medicago truncatula]
            gi|388502546|gb|AFK39339.1| unknown [Medicago truncatula]
          Length = 261

 Score =  331 bits (849), Expect = 2e-88
 Identities = 158/248 (63%), Positives = 193/248 (77%)
 Frame = -3

Query: 1216 NGDILMIEAAPPKTSLSGIAREEIIDALPYIDDDYGDPKVKAEVDKLVEEEMRRSTKKPS 1037
            NGD+LM+EA PP    S  +  EIIDALPYIDDDY DP+VK EVD+LVEEEMRRS+KKP+
Sbjct: 15   NGDVLMLEA-PPSYGRSSHSDAEIIDALPYIDDDYSDPRVKIEVDRLVEEEMRRSSKKPA 73

Query: 1036 DFLKNFPVAAKSNFENHPMLAREYERVRAGKPPATMDTSRYTLQPPSENKRSDSNAWKQH 857
            DFLK+FP    SNF ++PM+ REYERVRAG+PP ++D SRY L+ P  NKR+D  AWK  
Sbjct: 74   DFLKDFPPLPSSNFHDYPMIGREYERVRAGRPPVSLDRSRYELEAPPVNKRNDETAWKLA 133

Query: 856  LETAQSSLQHQVIRLENLDLMSKHGGDIWKHHNQRLEAFLSRMQAIALGYNERIEVVNRE 677
            ++ AQ  LQ+Q IR+ENLDL+ KHG D WK HNQRLE +LSRMQ +A   N++IE VNRE
Sbjct: 134  IQRAQRLLQYQTIRMENLDLLFKHGPDAWKQHNQRLEVYLSRMQKLAQEQNDKIEKVNRE 193

Query: 676  RKYHQQKTAVELNALSTQWKELCEKNIDIQAACANIENHIEDLRREAVDRGWNLEANMEN 497
            RKYHQQ TA ELNALS QW ELC+KNIDI+  CA++E H+ +LRREA +RGWNL+A  EN
Sbjct: 194  RKYHQQNTAYELNALSMQWNELCQKNIDIKVVCASVETHLNELRREAAERGWNLDAITEN 253

Query: 496  GPSLHSEA 473
            G   +SE+
Sbjct: 254  GQLANSES 261


>ref|XP_004137495.1| PREDICTED: pre-mRNA-splicing factor SPF27 homolog [Cucumis sativus]
            gi|449503115|ref|XP_004161841.1| PREDICTED:
            pre-mRNA-splicing factor SPF27 homolog [Cucumis sativus]
          Length = 256

 Score =  331 bits (848), Expect = 3e-88
 Identities = 161/244 (65%), Positives = 195/244 (79%), Gaps = 3/244 (1%)
 Frame = -3

Query: 1216 NGDILMIEAAPPKTSLSG---IAREEIIDALPYIDDDYGDPKVKAEVDKLVEEEMRRSTK 1046
            NGDILM+EA PP+ S       A  E+IDALPYIDDDY DP+VKAEVD+LVEEEMRRS+K
Sbjct: 7    NGDILMLEA-PPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEMRRSSK 65

Query: 1045 KPSDFLKNFPVAAKSNFENHPMLAREYERVRAGKPPATMDTSRYTLQPPSENKRSDSNAW 866
            +P+DFLK+ P   K  FE+HPMLAREYERVRAG+PP  +D +RY L+ P  NK++D  AW
Sbjct: 66   RPADFLKDLPPLPKFKFEDHPMLAREYERVRAGRPPVPLDVARYKLETPPPNKKNDETAW 125

Query: 865  KQHLETAQSSLQHQVIRLENLDLMSKHGGDIWKHHNQRLEAFLSRMQAIALGYNERIEVV 686
            KQ L+ AQ  L+HQV+RLENLDLMSK+G DIWK HN++LEA LSRMQ +A   NE+IE V
Sbjct: 126  KQTLQKAQCLLRHQVLRLENLDLMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNEKIEKV 185

Query: 685  NRERKYHQQKTAVELNALSTQWKELCEKNIDIQAACANIENHIEDLRREAVDRGWNLEAN 506
            NRERK+HQQ  A EL+ALSTQWKELCEKN++IQ AC  +E  I++LRREA ++GWNLE N
Sbjct: 186  NRERKFHQQNAAYELHALSTQWKELCEKNMEIQVACFQLEGQIQELRREAAEKGWNLEVN 245

Query: 505  MENG 494
            +ENG
Sbjct: 246  VENG 249


>gb|AFK38781.1| unknown [Lotus japonicus]
          Length = 248

 Score =  323 bits (827), Expect = 7e-86
 Identities = 154/247 (62%), Positives = 192/247 (77%)
 Frame = -3

Query: 1213 GDILMIEAAPPKTSLSGIAREEIIDALPYIDDDYGDPKVKAEVDKLVEEEMRRSTKKPSD 1034
            G++LM+EA P    L   +  EIIDALPYIDDDYGDP+VK EVD+LVE+EMRRS+KKP+D
Sbjct: 2    GEVLMLEAPPSYGGLPRSSDAEIIDALPYIDDDYGDPRVKVEVDRLVEDEMRRSSKKPAD 61

Query: 1033 FLKNFPVAAKSNFENHPMLAREYERVRAGKPPATMDTSRYTLQPPSENKRSDSNAWKQHL 854
            FLK+FP    SN E +PM+AREYERVRAG+PP ++D SRY L+ P  NKR+D  AWK  L
Sbjct: 62   FLKDFPPLPTSNLEGYPMIAREYERVRAGRPPVSIDRSRYELEIPPLNKRNDETAWKHAL 121

Query: 853  ETAQSSLQHQVIRLENLDLMSKHGGDIWKHHNQRLEAFLSRMQAIALGYNERIEVVNRER 674
            + AQ  LQ+Q++R+EN++L+ K+G D WK HN RLE +L RMQ +A   NE+IE VNRER
Sbjct: 122  QRAQRLLQYQMMRMENIELLLKYGPDAWKQHNHRLEVYLLRMQKLAQEQNEKIEKVNRER 181

Query: 673  KYHQQKTAVELNALSTQWKELCEKNIDIQAACANIENHIEDLRREAVDRGWNLEANMENG 494
            KYHQQ TA ELNALSTQW ELC+KNIDI AACA++E  I +L+REA +RGWNL+A  ENG
Sbjct: 182  KYHQQNTAYELNALSTQWNELCQKNIDINAACASVETRINELKREAAERGWNLDAISENG 241

Query: 493  PSLHSEA 473
               +SE+
Sbjct: 242  QLANSES 248