BLASTX nr result

ID: Coptis21_contig00008283 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00008283
         (471 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273621.1| PREDICTED: putative disease resistance prote...   106   2e-21
ref|XP_002516740.1| leucine-rich repeat containing protein, puta...   103   2e-20
ref|XP_002302910.1| cc-nbs-lrr resistance protein [Populus trich...   101   7e-20
ref|XP_002302909.1| cc-nbs-lrr resistance protein [Populus trich...   100   2e-19
ref|XP_002334072.1| cc-nbs-lrr resistance protein [Populus trich...   100   2e-19

>ref|XP_002273621.1| PREDICTED: putative disease resistance protein RGA1 [Vitis vinifera]
            gi|147842093|emb|CAN62651.1| hypothetical protein
            VITISV_003942 [Vitis vinifera]
          Length = 1129

 Score =  106 bits (264), Expect = 2e-21
 Identities = 66/168 (39%), Positives = 98/168 (58%), Gaps = 15/168 (8%)
 Frame = +2

Query: 2    HLELERTDQLSYFPRGLERLSCLRTLSRVVLDRDGGKGCQ-----IGELKLLDHIQGELR 166
            HLE+++ ++L+Y P GL  L+ L+TL    +  D  +  Q     + ELK LD ++GELR
Sbjct: 643  HLEIDKNNRLTYMPCGLGELTMLQTLPLFFVGNDCEESRQKRIGRLSELKCLDSLRGELR 702

Query: 167  IEGLGQVADSI----EAELKKKEKLRSLVLVFYEERPC-WMVSSRVAGEEKRN---LAVL 322
            IEGL  V  S     EA L+ K+ L+ L L + E++   W   +  A E +     ++V+
Sbjct: 703  IEGLSDVRGSALEAKEANLEGKQYLQCLRLYWLEQKDSLWGTRTETAEESEEGSEAVSVM 762

Query: 323  DGLQPHTNLAKLEIKGYEGNRFPLWM--SSINTYLPNLVKLELNFCNQ 460
            + LQPH NL +L I  YEG RFP WM    + + LPNLVK+E++ CN+
Sbjct: 763  ESLQPHLNLKELFIANYEGLRFPNWMMDDGLGSLLPNLVKIEISSCNR 810


>ref|XP_002516740.1| leucine-rich repeat containing protein, putative [Ricinus communis]
            gi|223544113|gb|EEF45638.1| leucine-rich repeat
            containing protein, putative [Ricinus communis]
          Length = 1104

 Score =  103 bits (256), Expect = 2e-20
 Identities = 67/159 (42%), Positives = 99/159 (62%), Gaps = 5/159 (3%)
 Frame = +2

Query: 2    HLELERTDQLSYFPRGLERLSCLRTLSRVVLDRDGGKGCQIGELKLLDHIQGELRIEGLG 181
            +L++   D LSY P  + +L+CLR LS  ++ +D G  C++ ELK L+ + G+L I+ L 
Sbjct: 640  YLDITNCDSLSYMPAEMGKLTCLRKLSLFIVGKDNG--CRMEELKELN-LGGDLSIKKLD 696

Query: 182  QVA---DSIEAELKKKEKLRSLVLVFYEERPCWMVSSRVAGEEKRNLA--VLDGLQPHTN 346
             V    D+  A L +KE L+SL L       CW   SR  GE+  NL+  VLDG QPH+N
Sbjct: 697  YVKSCEDAKNANLMQKEDLKSLSL-------CW---SR-EGEDSSNLSEEVLDGCQPHSN 745

Query: 347  LAKLEIKGYEGNRFPLWMSSINTYLPNLVKLELNFCNQC 463
            L KL I+ Y+G++F  WM+ ++  LPNLV++EL  C++C
Sbjct: 746  LKKLSIRKYQGSKFASWMTDLS--LPNLVEIELVDCDRC 782


>ref|XP_002302910.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
            gi|222844636|gb|EEE82183.1| cc-nbs-lrr resistance protein
            [Populus trichocarpa]
          Length = 1131

 Score =  101 bits (251), Expect = 7e-20
 Identities = 63/166 (37%), Positives = 91/166 (54%), Gaps = 10/166 (6%)
 Frame = +2

Query: 2    HLELERTDQLSYFPRGLERLSCLRTLSRVVLDRDGGKGCQIGELKLLDHIQGELRIEGLG 181
            +L++     L + P G+ +L CLR L+  +    G KG +I EL+ L+++ GELRI  L 
Sbjct: 634  YLDITDCGSLRFMPAGMRQLICLRKLTLFIAG--GEKGRRISELERLNNLAGELRIADLV 691

Query: 182  QVA---DSIEAELKKKEKLRSLVLVFYEERPCWMVSSRVAGEEKR-------NLAVLDGL 331
             V    D+  A LK K  L SL L ++E       S      ++R       N  VLDGL
Sbjct: 692  NVKNLEDAKSANLKLKTALLSLTLSWHENGSYLFDSRSFPPSQRRKSVIQENNEEVLDGL 751

Query: 332  QPHTNLAKLEIKGYEGNRFPLWMSSINTYLPNLVKLELNFCNQCSE 469
            QP + L +L I GY G++FP WM ++N  LPNLV++EL+ C  C +
Sbjct: 752  QPPSKLKRLRILGYRGSKFPNWMMNLNMTLPNLVEMELSACANCDQ 797


>ref|XP_002302909.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
            gi|222844635|gb|EEE82182.1| cc-nbs-lrr resistance protein
            [Populus trichocarpa]
          Length = 1075

 Score =  100 bits (248), Expect = 2e-19
 Identities = 60/159 (37%), Positives = 93/159 (58%), Gaps = 3/159 (1%)
 Frame = +2

Query: 2    HLELERTDQLSYFPRGLERLSCLRTLSRVVLDRDGGKGCQIGELKLLDHIQGELRIEGLG 181
            +L++   D L + P G+ +L CLR L+  ++  + G+  +I EL+ L+++ GEL I  L 
Sbjct: 640  YLDITACDSLQFMPCGMGQLICLRKLTMFIVGGENGR--RISELESLNNLAGELSIAYLV 697

Query: 182  QVA---DSIEAELKKKEKLRSLVLVFYEERPCWMVSSRVAGEEKRNLAVLDGLQPHTNLA 352
             V    D+  A L+ K  L SL L +   R   ++       ++ +  VL+GLQPH+NL 
Sbjct: 698  NVKNLEDAKSANLELKTALLSLTLSWNGNRTKSVI-------QENSEEVLEGLQPHSNLK 750

Query: 353  KLEIKGYEGNRFPLWMSSINTYLPNLVKLELNFCNQCSE 469
            KL I GY G+RFP WM ++N  LPNLV++EL+ C  C +
Sbjct: 751  KLMIWGYGGSRFPNWMMNLNMTLPNLVEMELSACPNCEQ 789


>ref|XP_002334072.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
            gi|222839772|gb|EEE78095.1| cc-nbs-lrr resistance protein
            [Populus trichocarpa]
          Length = 1005

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 62/157 (39%), Positives = 91/157 (57%), Gaps = 3/157 (1%)
 Frame = +2

Query: 2    HLELERTDQLSYFPRGLERLSCLRTLSRVVLDRDGGKGCQIGELKLLDHIQGELRIEGLG 181
            +L+L   D L   P G+ +L+CLR L   ++  + G    IGEL+ L++I GEL I+ LG
Sbjct: 602  YLDLTGCDALQCMPSGMGQLACLRKLGMFIVGTEAGH--HIGELQRLNYIGGELSIKDLG 659

Query: 182  QV---ADSIEAELKKKEKLRSLVLVFYEERPCWMVSSRVAGEEKRNLAVLDGLQPHTNLA 352
             V    D+  A L +K  L+SL L + E+      SS+++  E  +  VL  L+PH+N+ 
Sbjct: 660  NVQGLTDAQNANLMRKTNLQSLSLSWREDN-----SSKIS--EANSEDVLCALEPHSNMK 712

Query: 353  KLEIKGYEGNRFPLWMSSINTYLPNLVKLELNFCNQC 463
            KLEI GY G++FP WM  +   LPNLV++ L  C  C
Sbjct: 713  KLEISGYRGSKFPDWMMELR--LPNLVEISLESCMNC 747


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