BLASTX nr result
ID: Coptis21_contig00008282
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00008282 (531 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002518821.1| Nucleoprotein TPR, putative [Ricinus communi... 68 7e-10 ref|XP_002265730.2| PREDICTED: nuclear-pore anchor-like [Vitis v... 62 5e-08 emb|CBI24130.3| unnamed protein product [Vitis vinifera] 62 5e-08 emb|CAN80561.1| hypothetical protein VITISV_040288 [Vitis vinifera] 62 5e-08 ref|XP_002312219.1| predicted protein [Populus trichocarpa] gi|2... 62 7e-08 >ref|XP_002518821.1| Nucleoprotein TPR, putative [Ricinus communis] gi|223541994|gb|EEF43539.1| Nucleoprotein TPR, putative [Ricinus communis] Length = 2095 Score = 68.2 bits (165), Expect = 7e-10 Identities = 37/95 (38%), Positives = 56/95 (58%) Frame = -3 Query: 529 ELPPDVADEQDGRDISCMMTSTEPVEVQHELAPVPDVASSAVDEDLGSTVGDLVETTTSD 350 EL PDV + ++G ++S +M S E E E+ P + + DED+G+ + E + Sbjct: 1897 ELAPDVTEAEEGANMSNVMGSPESGEGLVEVGITPVTSPARFDEDVGTAEVEFGEINHPE 1956 Query: 349 IIMDEKTDTGEGVEETAEDSDKSDNGGDQGVVETD 245 ++ +EK D G+ VEE AE SDKS++G DQ ETD Sbjct: 1957 VVNEEKNDEGDLVEEPAECSDKSNDGNDQIAAETD 1991 >ref|XP_002265730.2| PREDICTED: nuclear-pore anchor-like [Vitis vinifera] Length = 2087 Score = 62.0 bits (149), Expect = 5e-08 Identities = 38/96 (39%), Positives = 55/96 (57%), Gaps = 1/96 (1%) Frame = -3 Query: 529 ELPPDVADEQDGRDISCMMTSTEPVEVQHELAPVPDVASSAVDED-LGSTVGDLVETTTS 353 EL PDV D + G D+ + T E Q E VP + + DE+ L + D+ + + Sbjct: 1887 ELDPDVTDIEGGGDMCNITGGTTIGEGQPETVVVPVTSPAGGDEEGLVTAAVDIGDINSP 1946 Query: 352 DIIMDEKTDTGEGVEETAEDSDKSDNGGDQGVVETD 245 +I+ DEKT G+ +EE AE SDKS++G +Q VETD Sbjct: 1947 EILNDEKTAEGDVMEEVAEGSDKSNDGNEQIAVETD 1982 >emb|CBI24130.3| unnamed protein product [Vitis vinifera] Length = 2088 Score = 62.0 bits (149), Expect = 5e-08 Identities = 38/96 (39%), Positives = 55/96 (57%), Gaps = 1/96 (1%) Frame = -3 Query: 529 ELPPDVADEQDGRDISCMMTSTEPVEVQHELAPVPDVASSAVDED-LGSTVGDLVETTTS 353 EL PDV D + G D+ + T E Q E VP + + DE+ L + D+ + + Sbjct: 1888 ELDPDVTDIEGGGDMCNITGGTTIGEGQPETVVVPVTSPAGGDEEGLVTAAVDIGDINSP 1947 Query: 352 DIIMDEKTDTGEGVEETAEDSDKSDNGGDQGVVETD 245 +I+ DEKT G+ +EE AE SDKS++G +Q VETD Sbjct: 1948 EILNDEKTAEGDVMEEVAEGSDKSNDGNEQIAVETD 1983 >emb|CAN80561.1| hypothetical protein VITISV_040288 [Vitis vinifera] Length = 1491 Score = 62.0 bits (149), Expect = 5e-08 Identities = 38/96 (39%), Positives = 55/96 (57%), Gaps = 1/96 (1%) Frame = -3 Query: 529 ELPPDVADEQDGRDISCMMTSTEPVEVQHELAPVPDVASSAVDED-LGSTVGDLVETTTS 353 EL PDV D + G D+ + T E Q E VP + + DE+ L + D+ + + Sbjct: 1291 ELDPDVTDIEGGGDMCNITGGTTIGEGQPETVVVPVTSPAGGDEEGLVTAAVDIGDINSP 1350 Query: 352 DIIMDEKTDTGEGVEETAEDSDKSDNGGDQGVVETD 245 +I+ DEKT G+ +EE AE SDKS++G +Q VETD Sbjct: 1351 EILNDEKTAEGDVMEEVAEGSDKSNDGNEQIAVETD 1386 >ref|XP_002312219.1| predicted protein [Populus trichocarpa] gi|222852039|gb|EEE89586.1| predicted protein [Populus trichocarpa] Length = 2052 Score = 61.6 bits (148), Expect = 7e-08 Identities = 39/91 (42%), Positives = 54/91 (59%), Gaps = 1/91 (1%) Frame = -3 Query: 514 VADEQDGRDISCMMTSTEPVEVQHELAPVPDVASSAVDEDLGSTVG-DLVETTTSDIIMD 338 VA+ ++G D+S M S E EV + PV A +D++ VG + E + ++I D Sbjct: 1853 VAEVEEGADMSNMAGSPETGEVLPDTTPVASPAR--IDDEAMVPVGMESGEINSPEMITD 1910 Query: 337 EKTDTGEGVEETAEDSDKSDNGGDQGVVETD 245 EK D G+ VEE E SDKS++GGDQ VETD Sbjct: 1911 EKNDEGDIVEEIGEGSDKSNDGGDQIAVETD 1941