BLASTX nr result

ID: Coptis21_contig00008277 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00008277
         (1161 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634371.1| PREDICTED: uncharacterized protein LOC100855...   451   e-124
emb|CBI19742.3| unnamed protein product [Vitis vinifera]              451   e-124
ref|XP_004164003.1| PREDICTED: bifunctional nuclease 1-like [Cuc...   430   e-118
ref|XP_002300754.1| predicted protein [Populus trichocarpa] gi|2...   429   e-118
ref|XP_004147851.1| PREDICTED: bifunctional nuclease 1-like [Cuc...   429   e-118

>ref|XP_003634371.1| PREDICTED: uncharacterized protein LOC100855103 [Vitis vinifera]
          Length = 327

 Score =  451 bits (1159), Expect = e-124
 Identities = 232/336 (69%), Positives = 272/336 (80%), Gaps = 12/336 (3%)
 Frame = +2

Query: 140  MGVLQQGPVVCPSLRTKQAAVVNGRLFTSTVVTKRRSCKVGIIKINHFSYKGS------- 298
            MG LQ GPV+CP++R K+A V     +T  V    +  K  I +   + ++G+       
Sbjct: 1    MGTLQ-GPVICPTVRAKEAGV-----YTLPVSLPLKKTK--IFRSGFWGFRGNCGGRTKA 52

Query: 299  -----SVLARRGNRIQCTYSSSSNDNGSMAENFDENNDEYVNSSVVEAVEVKSGADGFMI 463
                  +  R+   +QC++SSSS+ NGSMAENF+EN+++YVNSSVVEAVEVKSGADGFMI
Sbjct: 53   GSVPHQLHTRKCKTLQCSFSSSSDGNGSMAENFNENDEDYVNSSVVEAVEVKSGADGFMI 112

Query: 464  KMRDGKRFRCVHNNPQSGHFPDYAPHPAIVLKMEDGSDLLLPIIVLEMPSVLLMAAVRNI 643
            KMRDG+  RCVHNNPQ GH PDYAPHPAIVLKMEDG+ LLLPIIVLEMPSVLLMAAVRN+
Sbjct: 113  KMRDGRHLRCVHNNPQGGHMPDYAPHPAIVLKMEDGTGLLLPIIVLEMPSVLLMAAVRNV 172

Query: 644  QIPRPTVYQLAKVMIEKMGYEVKLVRVTKRVHEAYFAQLHLSKIGNETERISFDLRPSDA 823
            QI RPT+YQ+ K MI+KMGY VKLVRVTKRVHEAYFAQL+L+K+GNE E +SFDLRPSDA
Sbjct: 173  QIARPTLYQVMKEMIDKMGYAVKLVRVTKRVHEAYFAQLYLTKVGNEKESVSFDLRPSDA 232

Query: 824  INIAVRCKVPIQVNKYLAYSDGMRIIEPAKLATEDPHSDGLLFSTLDRPDGKPCVETKEF 1003
            INIAVRCKVPIQVNKYLAYSDGMR+IE AK++ +   SDGLLF+ LDRP G+PC+ETKEF
Sbjct: 233  INIAVRCKVPIQVNKYLAYSDGMRVIESAKVSVQASSSDGLLFTELDRPSGQPCIETKEF 292

Query: 1004 DLVRNMLVAAVEERYRDAAQLRDKLSQLRSKKRNWT 1111
            DLVRNML+AAVEERYRDAAQ RDKL+Q RS KRNWT
Sbjct: 293  DLVRNMLIAAVEERYRDAAQWRDKLTQFRS-KRNWT 327


>emb|CBI19742.3| unnamed protein product [Vitis vinifera]
          Length = 355

 Score =  451 bits (1159), Expect = e-124
 Identities = 232/336 (69%), Positives = 272/336 (80%), Gaps = 12/336 (3%)
 Frame = +2

Query: 140  MGVLQQGPVVCPSLRTKQAAVVNGRLFTSTVVTKRRSCKVGIIKINHFSYKGS------- 298
            MG LQ GPV+CP++R K+A V     +T  V    +  K  I +   + ++G+       
Sbjct: 29   MGTLQ-GPVICPTVRAKEAGV-----YTLPVSLPLKKTK--IFRSGFWGFRGNCGGRTKA 80

Query: 299  -----SVLARRGNRIQCTYSSSSNDNGSMAENFDENNDEYVNSSVVEAVEVKSGADGFMI 463
                  +  R+   +QC++SSSS+ NGSMAENF+EN+++YVNSSVVEAVEVKSGADGFMI
Sbjct: 81   GSVPHQLHTRKCKTLQCSFSSSSDGNGSMAENFNENDEDYVNSSVVEAVEVKSGADGFMI 140

Query: 464  KMRDGKRFRCVHNNPQSGHFPDYAPHPAIVLKMEDGSDLLLPIIVLEMPSVLLMAAVRNI 643
            KMRDG+  RCVHNNPQ GH PDYAPHPAIVLKMEDG+ LLLPIIVLEMPSVLLMAAVRN+
Sbjct: 141  KMRDGRHLRCVHNNPQGGHMPDYAPHPAIVLKMEDGTGLLLPIIVLEMPSVLLMAAVRNV 200

Query: 644  QIPRPTVYQLAKVMIEKMGYEVKLVRVTKRVHEAYFAQLHLSKIGNETERISFDLRPSDA 823
            QI RPT+YQ+ K MI+KMGY VKLVRVTKRVHEAYFAQL+L+K+GNE E +SFDLRPSDA
Sbjct: 201  QIARPTLYQVMKEMIDKMGYAVKLVRVTKRVHEAYFAQLYLTKVGNEKESVSFDLRPSDA 260

Query: 824  INIAVRCKVPIQVNKYLAYSDGMRIIEPAKLATEDPHSDGLLFSTLDRPDGKPCVETKEF 1003
            INIAVRCKVPIQVNKYLAYSDGMR+IE AK++ +   SDGLLF+ LDRP G+PC+ETKEF
Sbjct: 261  INIAVRCKVPIQVNKYLAYSDGMRVIESAKVSVQASSSDGLLFTELDRPSGQPCIETKEF 320

Query: 1004 DLVRNMLVAAVEERYRDAAQLRDKLSQLRSKKRNWT 1111
            DLVRNML+AAVEERYRDAAQ RDKL+Q RS KRNWT
Sbjct: 321  DLVRNMLIAAVEERYRDAAQWRDKLTQFRS-KRNWT 355


>ref|XP_004164003.1| PREDICTED: bifunctional nuclease 1-like [Cucumis sativus]
          Length = 327

 Score =  430 bits (1106), Expect = e-118
 Identities = 224/325 (68%), Positives = 264/325 (81%), Gaps = 5/325 (1%)
 Frame = +2

Query: 140  MGVLQQGPVVCPSLRTKQAAVVNGRLFTSTVVTK-RRSCKVGIIKINHFSYKGSSVLARR 316
            MG LQ GPVVCP++  KQA   +  +  S +    RR    G   IN  + K  ++  +R
Sbjct: 1    MGSLQ-GPVVCPTICAKQAGFCSLPINRSLMAFSFRRGQLWGFTGINGLNAKLPAISLKR 59

Query: 317  GNR----IQCTYSSSSNDNGSMAENFDENNDEYVNSSVVEAVEVKSGADGFMIKMRDGKR 484
              R    ++C++SSSS+DNGS AENF+E N+EYV SSVVEAVEVKSGADGF+IKMRDG+ 
Sbjct: 60   CTRKCKTLRCSFSSSSDDNGSTAENFNEKNEEYVESSVVEAVEVKSGADGFVIKMRDGRH 119

Query: 485  FRCVHNNPQSGHFPDYAPHPAIVLKMEDGSDLLLPIIVLEMPSVLLMAAVRNIQIPRPTV 664
             RCVHNNP  GH PDYAPHPAIVLKMEDG+ LLLPIIVLEMPSVLLMAAVRN+ I RPT+
Sbjct: 120  LRCVHNNPHGGHLPDYAPHPAIVLKMEDGTGLLLPIIVLEMPSVLLMAAVRNVPIARPTM 179

Query: 665  YQLAKVMIEKMGYEVKLVRVTKRVHEAYFAQLHLSKIGNETERISFDLRPSDAINIAVRC 844
            YQ+ K MI+KMGYEVKLVRVTKRVHEAYFAQL+LSKIG ET+ +SFDLRPSDAINIAVRC
Sbjct: 180  YQVVKEMIDKMGYEVKLVRVTKRVHEAYFAQLYLSKIGCETDCLSFDLRPSDAINIAVRC 239

Query: 845  KVPIQVNKYLAYSDGMRIIEPAKLATEDPHSDGLLFSTLDRPDGKPCVETKEFDLVRNML 1024
            +VPIQVNKYLAYSDGMR++E  KL+T+   +DGLLF+ LDRP G+PCVE KEF+LVRNML
Sbjct: 240  QVPIQVNKYLAYSDGMRVVESGKLSTQALATDGLLFTELDRPSGQPCVEAKEFNLVRNML 299

Query: 1025 VAAVEERYRDAAQLRDKLSQLRSKK 1099
            +AAVEERYRDAAQ RDKL+ LR+++
Sbjct: 300  IAAVEERYRDAAQWRDKLNLLRARR 324


>ref|XP_002300754.1| predicted protein [Populus trichocarpa] gi|222842480|gb|EEE80027.1|
            predicted protein [Populus trichocarpa]
          Length = 326

 Score =  429 bits (1104), Expect = e-118
 Identities = 223/325 (68%), Positives = 259/325 (79%), Gaps = 10/325 (3%)
 Frame = +2

Query: 155  QGPVVCPSLRTKQAA---------VVNGRLFTSTVVT-KRRSCKVGIIKINHFSYKGSSV 304
            QGPV+CP++R KQA          +V  RL  S +   K    KVG+            +
Sbjct: 5    QGPVICPTVRAKQAGKHAFPMTGPLVKARLVRSELWGFKGYKTKVGLTS--------RQL 56

Query: 305  LARRGNRIQCTYSSSSNDNGSMAENFDENNDEYVNSSVVEAVEVKSGADGFMIKMRDGKR 484
             ARR N +QC+ SSSS+ NGS AENF+EN+++YVNSSVVEAVEVKSG+DGF+IKMRDG+ 
Sbjct: 57   KARRCNTVQCSLSSSSDGNGSTAENFNENDEDYVNSSVVEAVEVKSGSDGFVIKMRDGRH 116

Query: 485  FRCVHNNPQSGHFPDYAPHPAIVLKMEDGSDLLLPIIVLEMPSVLLMAAVRNIQIPRPTV 664
             RCVHNNPQ GH PDYAPHPAIVLKMEDG+ LLLPIIVLEMPSVLLMAAVRN+QI RPT+
Sbjct: 117  LRCVHNNPQGGHLPDYAPHPAIVLKMEDGTGLLLPIIVLEMPSVLLMAAVRNVQIARPTM 176

Query: 665  YQLAKVMIEKMGYEVKLVRVTKRVHEAYFAQLHLSKIGNETERISFDLRPSDAINIAVRC 844
            YQ+ K M+EKMG+EVKLVRVTKRVHEAYFAQL+L+KIGNETE +SFDLRPSDAINIAVRC
Sbjct: 177  YQVVKDMVEKMGFEVKLVRVTKRVHEAYFAQLYLTKIGNETECVSFDLRPSDAINIAVRC 236

Query: 845  KVPIQVNKYLAYSDGMRIIEPAKLATEDPHSDGLLFSTLDRPDGKPCVETKEFDLVRNML 1024
            KVPIQVNKYLAYSDGMR+IE  K   + P SDG+LF+ LDRP G+PC++TKEF+LVRNM 
Sbjct: 237  KVPIQVNKYLAYSDGMRVIESGK-PIQSPASDGILFTELDRPTGQPCLDTKEFNLVRNMF 295

Query: 1025 VAAVEERYRDAAQLRDKLSQLRSKK 1099
             AA EERY DAAQ RDKL Q R+K+
Sbjct: 296  TAAFEERYGDAAQWRDKLGQFRAKR 320


>ref|XP_004147851.1| PREDICTED: bifunctional nuclease 1-like [Cucumis sativus]
          Length = 327

 Score =  429 bits (1102), Expect = e-118
 Identities = 223/325 (68%), Positives = 264/325 (81%), Gaps = 5/325 (1%)
 Frame = +2

Query: 140  MGVLQQGPVVCPSLRTKQAAVVNGRLFTSTVVTK-RRSCKVGIIKINHFSYKGSSVLARR 316
            MG LQ GPVVCP++  KQA   +  +  S +    RR    G   IN  + K  ++  +R
Sbjct: 1    MGSLQ-GPVVCPTICAKQAGFCSLPINRSLMAFSFRRGQLWGFTGINGLNAKLPAISLKR 59

Query: 317  GNR----IQCTYSSSSNDNGSMAENFDENNDEYVNSSVVEAVEVKSGADGFMIKMRDGKR 484
              R    ++C++SSSS+DNGS AENF+E N+EYV SSVVEAVEVKSGADGF+IKMRDG+ 
Sbjct: 60   CTRKCKTLRCSFSSSSDDNGSTAENFNEKNEEYVESSVVEAVEVKSGADGFVIKMRDGRH 119

Query: 485  FRCVHNNPQSGHFPDYAPHPAIVLKMEDGSDLLLPIIVLEMPSVLLMAAVRNIQIPRPTV 664
             RCVHNNP  GH PDYAPHPAIVLKMEDG+ LLLPIIVLEMPSVLLMAAVRN+ I RPT+
Sbjct: 120  LRCVHNNPHGGHLPDYAPHPAIVLKMEDGTGLLLPIIVLEMPSVLLMAAVRNVPIARPTM 179

Query: 665  YQLAKVMIEKMGYEVKLVRVTKRVHEAYFAQLHLSKIGNETERISFDLRPSDAINIAVRC 844
            YQ+ K MI+KMGYEVKLVRVTKRVHEAYFAQL+LSKIG ET+ +SFDLRPSDAINIAVRC
Sbjct: 180  YQVVKEMIDKMGYEVKLVRVTKRVHEAYFAQLYLSKIGCETDCLSFDLRPSDAINIAVRC 239

Query: 845  KVPIQVNKYLAYSDGMRIIEPAKLATEDPHSDGLLFSTLDRPDGKPCVETKEFDLVRNML 1024
            +VPIQVNKYLA+SDGMR++E  KL+T+   +DGLLF+ LDRP G+PCVE KEF+LVRNML
Sbjct: 240  QVPIQVNKYLAFSDGMRVVESGKLSTQALATDGLLFTELDRPSGQPCVEAKEFNLVRNML 299

Query: 1025 VAAVEERYRDAAQLRDKLSQLRSKK 1099
            +AAVEERYRDAAQ RDKL+ LR+++
Sbjct: 300  IAAVEERYRDAAQWRDKLNLLRARR 324


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