BLASTX nr result

ID: Coptis21_contig00008272 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00008272
         (467 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003624500.1| RING finger protein [Medicago truncatula] gi...    80   2e-13
ref|XP_004159146.1| PREDICTED: RING finger protein 10-like [Cucu...    79   3e-13
ref|XP_004145702.1| PREDICTED: RING finger protein 10-like [Cucu...    79   3e-13
ref|XP_003548496.1| PREDICTED: RING finger protein 10-like [Glyc...    79   3e-13
ref|XP_003553982.1| PREDICTED: RING finger protein 10-like [Glyc...    77   1e-12

>ref|XP_003624500.1| RING finger protein [Medicago truncatula]
           gi|355499515|gb|AES80718.1| RING finger protein
           [Medicago truncatula]
          Length = 744

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 48/95 (50%), Positives = 57/95 (60%)
 Frame = -3

Query: 465 ERKRFSDVTRLGFAAAHDSPXXXXXXXXXXXXXXXXXETSGLAGNPGKRNMVTLSFANII 286
           ERK FS VTRLGFAA HDSP                  +SG A   G RN  TLS++N+I
Sbjct: 651 ERKLFSSVTRLGFAAGHDSPSFPTQETSDLHSNNSIAGSSGTA---GLRNGETLSYSNVI 707

Query: 285 STTKSPESREIPKIDAHVGKKGKKPNRVLLSTAGG 181
           S  +S  +   PK +  +GKKGKKPNRVLLST+GG
Sbjct: 708 SRAESNGTSNAPKTN-DLGKKGKKPNRVLLSTSGG 741


>ref|XP_004159146.1| PREDICTED: RING finger protein 10-like [Cucumis sativus]
          Length = 654

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 50/94 (53%), Positives = 58/94 (61%)
 Frame = -3

Query: 462 RKRFSDVTRLGFAAAHDSPXXXXXXXXXXXXXXXXXETSGLAGNPGKRNMVTLSFANIIS 283
           R+ FS VTRLGFAAAHDSP                 + S +A + G +N  T SFAN+IS
Sbjct: 560 RQLFSSVTRLGFAAAHDSPSLRIEETDSLHIHEVKSDLS-VASSAGTQN-ATPSFANVIS 617

Query: 282 TTKSPESREIPKIDAHVGKKGKKPNRVLLSTAGG 181
             KS  S E PK +  VGKKGKKP+RVLLSTAGG
Sbjct: 618 RAKSGGSIESPKANEVVGKKGKKPSRVLLSTAGG 651


>ref|XP_004145702.1| PREDICTED: RING finger protein 10-like [Cucumis sativus]
          Length = 742

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 50/94 (53%), Positives = 58/94 (61%)
 Frame = -3

Query: 462 RKRFSDVTRLGFAAAHDSPXXXXXXXXXXXXXXXXXETSGLAGNPGKRNMVTLSFANIIS 283
           R+ FS VTRLGFAAAHDSP                 + S +A + G +N  T SFAN+IS
Sbjct: 648 RQLFSSVTRLGFAAAHDSPSLRIEETDSLHIHEVKSDLS-VASSAGTQN-ATPSFANVIS 705

Query: 282 TTKSPESREIPKIDAHVGKKGKKPNRVLLSTAGG 181
             KS  S E PK +  VGKKGKKP+RVLLSTAGG
Sbjct: 706 RAKSGGSIESPKANEVVGKKGKKPSRVLLSTAGG 739


>ref|XP_003548496.1| PREDICTED: RING finger protein 10-like [Glycine max]
          Length = 838

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 49/95 (51%), Positives = 58/95 (61%)
 Frame = -3

Query: 465  ERKRFSDVTRLGFAAAHDSPXXXXXXXXXXXXXXXXXETSGLAGNPGKRNMVTLSFANII 286
            ERK FS+VTRLGFAAAHDSP                  TS  + + G RN  T S++N+I
Sbjct: 745  ERKSFSNVTRLGFAAAHDSP---SLQIQETSGLHNNNRTSDSSVSTGLRNGETQSYSNVI 801

Query: 285  STTKSPESREIPKIDAHVGKKGKKPNRVLLSTAGG 181
            S  +S  S   PK +  +GKKGKKPNRVLLSTAGG
Sbjct: 802  SRAESNISSNAPKTN-ELGKKGKKPNRVLLSTAGG 835


>ref|XP_003553982.1| PREDICTED: RING finger protein 10-like [Glycine max]
          Length = 747

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 53/104 (50%), Positives = 59/104 (56%), Gaps = 9/104 (8%)
 Frame = -3

Query: 465 ERKRFSDVTRLGFAAAHDSPXXXXXXXXXXXXXXXXXETSGLAGN---------PGKRNM 313
           ERK FS+VTRLGFAAAHDSP                 ETSGL  N          G RN 
Sbjct: 654 ERKSFSNVTRLGFAAAHDSP------------SLQIQETSGLHNNNTTADSSVTTGLRNG 701

Query: 312 VTLSFANIISTTKSPESREIPKIDAHVGKKGKKPNRVLLSTAGG 181
            T S++N  S T+S  S   PK +  +GKKGKKPNRVLLSTAGG
Sbjct: 702 ETQSYSNATSRTESNISSNAPKTN-ELGKKGKKPNRVLLSTAGG 744


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