BLASTX nr result

ID: Coptis21_contig00008262 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00008262
         (942 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24130.3| unnamed protein product [Vitis vinifera]              424   e-116
ref|XP_002265730.2| PREDICTED: nuclear-pore anchor-like [Vitis v...   416   e-114
ref|XP_002312219.1| predicted protein [Populus trichocarpa] gi|2...   408   e-112
ref|XP_003546839.1| PREDICTED: nuclear-pore anchor-like [Glycine...   387   e-105
ref|XP_003532900.1| PREDICTED: nuclear-pore anchor-like [Glycine...   379   e-103

>emb|CBI24130.3| unnamed protein product [Vitis vinifera]
          Length = 2088

 Score =  424 bits (1090), Expect = e-116
 Identities = 215/315 (68%), Positives = 269/315 (85%), Gaps = 1/315 (0%)
 Frame = -1

Query: 942  EIMGMEVQISSMKEDLEKEHQRWRTAQNNYERQVILQSETIQELTKTSQVLASLQEEVSQ 763
            +I  +E+QIS++K+DLE EH+RWR+AQ+NYERQVILQSETIQELTKTSQ LA LQ+E S+
Sbjct: 1060 QIAAIEIQISALKDDLENEHRRWRSAQDNYERQVILQSETIQELTKTSQALALLQKEASE 1119

Query: 762  LRKLADSQKSENDILKEKLESEKSVLGKLKDDAERKYNEVNEQNKILHARVEALHIKLAE 583
            LRKLAD++ +EN+ LK K E EKS+L   K++AE+KY+E+NEQNKILH+R+EALHIKLAE
Sbjct: 1120 LRKLADAKNAENNELKGKWEVEKSMLEVAKNEAEKKYDEINEQNKILHSRLEALHIKLAE 1179

Query: 582  KERLSAGTSGSTGLDVQGD-DMQTVVSYLRRSKEIAETEISLLKQEKRRLQSQLESALKA 406
            K+R S G S S+GLD  GD  +Q V++YLRRSKEIAETEISLLKQEK RLQSQLESALKA
Sbjct: 1180 KDRRSVGISSSSGLDPLGDAGLQNVINYLRRSKEIAETEISLLKQEKLRLQSQLESALKA 1239

Query: 405  SETAQAQLHTERANSRALLFSDEDFKSLQIQVREMNLLRESNLQLREENKYNFEECQKLR 226
            +ETAQA LH ERANSR LLF++E+ KSLQ+QVREMNLLRESN+Q+REENK+NFEECQKLR
Sbjct: 1240 TETAQASLHAERANSRTLLFTEEEIKSLQLQVREMNLLRESNMQIREENKHNFEECQKLR 1299

Query: 225  EMAQKARVEMEHLQTMVREKEIEVDSCKREIEMQKIEITNLESRIAELLGACKNVELEEY 46
            E+AQKAR+E E+L+ ++RE + EV++CK+EIEMQ+ E   LE R+ ELL   KN+++E+Y
Sbjct: 1300 EVAQKARIETENLEVLLRESQTEVETCKKEIEMQRTEKDQLEKRVGELLEQSKNIDVEDY 1359

Query: 45   NRLKDDCPKMQANLR 1
             R+K D  +MQ NLR
Sbjct: 1360 ERMKHDFHQMQINLR 1374


>ref|XP_002265730.2| PREDICTED: nuclear-pore anchor-like [Vitis vinifera]
          Length = 2087

 Score =  416 bits (1068), Expect = e-114
 Identities = 213/315 (67%), Positives = 267/315 (84%), Gaps = 1/315 (0%)
 Frame = -1

Query: 942  EIMGMEVQISSMKEDLEKEHQRWRTAQNNYERQVILQSETIQELTKTSQVLASLQEEVSQ 763
            +I  +E+QIS++K+DLE EH+RWR+AQ+NYERQVILQSETIQELTKTSQ LA LQ+E S+
Sbjct: 1060 QIAAIEIQISALKDDLENEHRRWRSAQDNYERQVILQSETIQELTKTSQALALLQKEASE 1119

Query: 762  LRKLADSQKSENDILKEKLESEKSVLGKLKDDAERKYNEVNEQNKILHARVEALHIKLAE 583
            LRKLAD++ +EN+ LK K E EKS+L   K++AE+KY+E+NEQNKILH+R+EALHIKLAE
Sbjct: 1120 LRKLADAKNAENNELKGKWEVEKSMLEVAKNEAEKKYDEINEQNKILHSRLEALHIKLAE 1179

Query: 582  KERLSAGTSGSTGLDVQGD-DMQTVVSYLRRSKEIAETEISLLKQEKRRLQSQLESALKA 406
            K+R S G S S+GLD  GD  +Q V++YLRRSKEIAETEISLLKQEK RLQSQ  SALKA
Sbjct: 1180 KDRRSVGISSSSGLDPLGDAGLQNVINYLRRSKEIAETEISLLKQEKLRLQSQ--SALKA 1237

Query: 405  SETAQAQLHTERANSRALLFSDEDFKSLQIQVREMNLLRESNLQLREENKYNFEECQKLR 226
            +ETAQA LH ERANSR LLF++E+ KSLQ+QVREMNLLRESN+Q+REENK+NFEECQKLR
Sbjct: 1238 TETAQASLHAERANSRTLLFTEEEIKSLQLQVREMNLLRESNMQIREENKHNFEECQKLR 1297

Query: 225  EMAQKARVEMEHLQTMVREKEIEVDSCKREIEMQKIEITNLESRIAELLGACKNVELEEY 46
            E+AQKAR+E E+L+ ++RE + EV++CK+EIEMQ+ E   LE R+ ELL   KN+++E+Y
Sbjct: 1298 EVAQKARIETENLEVLLRESQTEVETCKKEIEMQRTEKDQLEKRVGELLEQSKNIDVEDY 1357

Query: 45   NRLKDDCPKMQANLR 1
             R+K D  +MQ NLR
Sbjct: 1358 ERMKHDFHQMQINLR 1372


>ref|XP_002312219.1| predicted protein [Populus trichocarpa] gi|222852039|gb|EEE89586.1|
            predicted protein [Populus trichocarpa]
          Length = 2052

 Score =  408 bits (1049), Expect = e-112
 Identities = 205/316 (64%), Positives = 264/316 (83%), Gaps = 2/316 (0%)
 Frame = -1

Query: 942  EIMGMEVQISSMKEDLEKEHQRWRTAQNNYERQVILQSETIQELTKTSQVLASLQEEVSQ 763
            +I+ +E QIS++KEDLEKEH+RWR AQ NYERQVILQSETIQELTKTSQ L+ LQ+E S 
Sbjct: 1061 QIVALESQISALKEDLEKEHERWRAAQANYERQVILQSETIQELTKTSQALSLLQQEASD 1120

Query: 762  LRKLADSQKSENDILKEKLESEKSVLGKLKDDAERKYNEVNEQNKILHARVEALHIKLAE 583
            LRKL D+QKS ND LK K E EKS++ + K+ A++KY+E+NEQNK+LH+R+EA+HI+LAE
Sbjct: 1121 LRKLVDAQKSANDELKSKWEVEKSMIEESKNQAKKKYDELNEQNKLLHSRLEAIHIQLAE 1180

Query: 582  KERLSAGTSGSTGLDVQGDD--MQTVVSYLRRSKEIAETEISLLKQEKRRLQSQLESALK 409
            K+R +AG S  +     G D  +Q VV+YLRRSKEIAETEISLLKQEK RLQSQL+ ALK
Sbjct: 1181 KDRNAAGISSGSNAPGLGSDAGLQNVVNYLRRSKEIAETEISLLKQEKLRLQSQLDGALK 1240

Query: 408  ASETAQAQLHTERANSRALLFSDEDFKSLQIQVREMNLLRESNLQLREENKYNFEECQKL 229
            A+ETAQA LHTERANSR LLFS+E+ KSLQ+QVRE+ LLRESN+QLREENK+NFEECQKL
Sbjct: 1241 AAETAQASLHTERANSRTLLFSEEEIKSLQLQVRELTLLRESNMQLREENKHNFEECQKL 1300

Query: 228  REMAQKARVEMEHLQTMVREKEIEVDSCKREIEMQKIEITNLESRIAELLGACKNVELEE 49
            RE+AQ  + + + L++++RE++IEV++CK+EIEM K E  +LE R++ELL  C+N+++E+
Sbjct: 1301 REVAQNTKAQSDKLESLLRERQIEVEACKKEIEMDKAEKDHLEKRMSELLERCRNIDVED 1360

Query: 48   YNRLKDDCPKMQANLR 1
            YNR+KDD  +M+  LR
Sbjct: 1361 YNRMKDDLRQMEEKLR 1376


>ref|XP_003546839.1| PREDICTED: nuclear-pore anchor-like [Glycine max]
          Length = 2075

 Score =  387 bits (993), Expect = e-105
 Identities = 198/316 (62%), Positives = 259/316 (81%), Gaps = 2/316 (0%)
 Frame = -1

Query: 942  EIMGMEVQISSMKEDLEKEHQRWRTAQNNYERQVILQSETIQELTKTSQVLASLQEEVSQ 763
            +I  ME+QIS +KE+L++EHQ+WR  Q NYERQV+LQSETIQELTKTS+ LA LQEE S+
Sbjct: 1061 QISAMEIQISGLKENLDREHQKWRATQTNYERQVVLQSETIQELTKTSEALALLQEEASE 1120

Query: 762  LRKLADSQKSENDILKEKLESEKSVLGKLKDDAERKYNEVNEQNKILHARVEALHIKLAE 583
            LRKLA++QK EN+ LK K E EK+ L K ++DAE+KYNE+NEQNKILH+++EA HI+ AE
Sbjct: 1121 LRKLANTQKIENNELKTKWEDEKAQLEKSRNDAEKKYNEINEQNKILHSQLEAFHIQWAE 1180

Query: 582  KERLSAG-TSGSTGLDVQGD-DMQTVVSYLRRSKEIAETEISLLKQEKRRLQSQLESALK 409
            KER +AG +SGS+  D  GD  +Q V++YLRRSKEIAETE+SLLKQEK RLQSQLE+ALK
Sbjct: 1181 KERNAAGISSGSSSADAFGDAGLQNVINYLRRSKEIAETEVSLLKQEKLRLQSQLETALK 1240

Query: 408  ASETAQAQLHTERANSRALLFSDEDFKSLQIQVREMNLLRESNLQLREENKYNFEECQKL 229
            A+E+A A L TERA SR+ LF++E+FK+LQ+QVREMNLLRESN+QLREENK+NFEECQKL
Sbjct: 1241 AAESAHASLETERAKSRSFLFTEEEFKALQLQVREMNLLRESNMQLREENKHNFEECQKL 1300

Query: 228  REMAQKARVEMEHLQTMVREKEIEVDSCKREIEMQKIEITNLESRIAELLGACKNVELEE 49
            RE+AQK R E E+L+ +++E+EI++D   +EIE  K+E  +L  ++ ELL   KNV++E+
Sbjct: 1301 RELAQKVRAETENLENLLKEREIKLDGHTKEIETLKMEKDHLNKKVTELLERSKNVDVED 1360

Query: 48   YNRLKDDCPKMQANLR 1
            Y+R+K    ++Q  LR
Sbjct: 1361 YDRVKKLAKEIQDKLR 1376


>ref|XP_003532900.1| PREDICTED: nuclear-pore anchor-like [Glycine max]
          Length = 2088

 Score =  379 bits (974), Expect = e-103
 Identities = 199/316 (62%), Positives = 256/316 (81%), Gaps = 2/316 (0%)
 Frame = -1

Query: 942  EIMGMEVQISSMKEDLEKEHQRWRTAQNNYERQVILQSETIQELTKTSQVLASLQEEVSQ 763
            +I  ME+QIS +KE L++EHQ+WR AQ NYERQV+LQSETIQELTKTS+ LA LQEE S+
Sbjct: 1064 QISAMEIQISGLKEKLDREHQKWRAAQTNYERQVVLQSETIQELTKTSEALALLQEEASE 1123

Query: 762  LRKLADSQKSENDILKEKLESEKSVLGKLKDDAERKYNEVNEQNKILHARVEALHIKLAE 583
            LRKLA++QK EN+ LK K E EK  L K ++DAE+KYNE+NEQNKILH+++EA HI+ AE
Sbjct: 1124 LRKLANTQKIENNELKAKWEDEKVQLEKSRNDAEKKYNEINEQNKILHSQLEAFHIQWAE 1183

Query: 582  KERLSAG-TSGSTGLDVQGD-DMQTVVSYLRRSKEIAETEISLLKQEKRRLQSQLESALK 409
            KER +AG +SGS+  D  GD  +Q V++YLRRSKEIAETE+SLLKQEK RLQSQ  SALK
Sbjct: 1184 KERNAAGISSGSSSADAFGDAGLQNVINYLRRSKEIAETEVSLLKQEKLRLQSQ--SALK 1241

Query: 408  ASETAQAQLHTERANSRALLFSDEDFKSLQIQVREMNLLRESNLQLREENKYNFEECQKL 229
            A+E+A A L TERA SR+ LF++E+FK+LQ+QVRE+NLLRESN+QLREENK+NFEECQKL
Sbjct: 1242 AAESAHASLETERAKSRSFLFTEEEFKALQLQVRELNLLRESNMQLREENKHNFEECQKL 1301

Query: 228  REMAQKARVEMEHLQTMVREKEIEVDSCKREIEMQKIEITNLESRIAELLGACKNVELEE 49
            RE+AQK R E E+L+ ++RE+EIE+   K+EI   K+E  NL  +++ELL   KNV++E+
Sbjct: 1302 RELAQKVRAETENLENLLREREIELQRHKKEIGTLKMEKDNLNKKVSELLERSKNVDVED 1361

Query: 48   YNRLKDDCPKMQANLR 1
            Y+R+K    ++Q  LR
Sbjct: 1362 YDRVKKLAREIQDKLR 1377


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