BLASTX nr result

ID: Coptis21_contig00008259 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00008259
         (250 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278759.1| PREDICTED: 40S ribosomal protein S10-like [V...   139   2e-31
emb|CBI34383.3| unnamed protein product [Vitis vinifera]              139   2e-31
ref|XP_002273286.2| PREDICTED: 40S ribosomal protein S10-like [V...   137   7e-31
emb|CBI22651.3| unnamed protein product [Vitis vinifera]              137   7e-31
gb|AEC10962.1| 40S ribosomal protein s10 [Camellia sinensis]          137   1e-30

>ref|XP_002278759.1| PREDICTED: 40S ribosomal protein S10-like [Vitis vinifera]
          Length = 180

 Score =  139 bits (350), Expect = 2e-31
 Identities = 65/68 (95%), Positives = 67/68 (98%)
 Frame = -1

Query: 250 LEKHPDIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTFLNLPSEIVP 71
           L KHPDIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRT+LNLPSEIVP
Sbjct: 29  LAKHPDIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVP 88

Query: 70  ATLKKSLK 47
           ATLKKS+K
Sbjct: 89  ATLKKSVK 96


>emb|CBI34383.3| unnamed protein product [Vitis vinifera]
          Length = 210

 Score =  139 bits (350), Expect = 2e-31
 Identities = 65/68 (95%), Positives = 67/68 (98%)
 Frame = -1

Query: 250 LEKHPDIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTFLNLPSEIVP 71
           L KHPDIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRT+LNLPSEIVP
Sbjct: 59  LAKHPDIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVP 118

Query: 70  ATLKKSLK 47
           ATLKKS+K
Sbjct: 119 ATLKKSVK 126


>ref|XP_002273286.2| PREDICTED: 40S ribosomal protein S10-like [Vitis vinifera]
          Length = 187

 Score =  137 bits (346), Expect = 7e-31
 Identities = 64/68 (94%), Positives = 67/68 (98%)
 Frame = -1

Query: 250 LEKHPDIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTFLNLPSEIVP 71
           L KHP+IDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRT+LNLPSEIVP
Sbjct: 36  LAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVP 95

Query: 70  ATLKKSLK 47
           ATLKKS+K
Sbjct: 96  ATLKKSVK 103


>emb|CBI22651.3| unnamed protein product [Vitis vinifera]
          Length = 215

 Score =  137 bits (346), Expect = 7e-31
 Identities = 64/68 (94%), Positives = 67/68 (98%)
 Frame = -1

Query: 250 LEKHPDIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTFLNLPSEIVP 71
           L KHP+IDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRT+LNLPSEIVP
Sbjct: 64  LAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVP 123

Query: 70  ATLKKSLK 47
           ATLKKS+K
Sbjct: 124 ATLKKSVK 131


>gb|AEC10962.1| 40S ribosomal protein s10 [Camellia sinensis]
          Length = 196

 Score =  137 bits (344), Expect = 1e-30
 Identities = 64/68 (94%), Positives = 66/68 (97%)
 Frame = -1

Query: 250 LEKHPDIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTFLNLPSEIVP 71
           L KHP+IDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRT+LNLPSEIVP
Sbjct: 29  LAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVP 88

Query: 70  ATLKKSLK 47
           ATLKKS K
Sbjct: 89  ATLKKSAK 96


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