BLASTX nr result

ID: Coptis21_contig00008255 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00008255
         (1263 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI38912.3| unnamed protein product [Vitis vinifera]              397   e-108
ref|XP_003633924.1| PREDICTED: uncharacterized protein LOC100854...   396   e-108
gb|ABK96523.1| unknown [Populus trichocarpa x Populus deltoides]      375   e-101
ref|XP_002511656.1| conserved hypothetical protein [Ricinus comm...   367   3e-99
ref|XP_003517021.1| PREDICTED: uncharacterized protein LOC100779...   365   1e-98

>emb|CBI38912.3| unnamed protein product [Vitis vinifera]
          Length = 433

 Score =  397 bits (1020), Expect = e-108
 Identities = 195/342 (57%), Positives = 253/342 (73%), Gaps = 4/342 (1%)
 Frame = +3

Query: 42   AVGATEGFSMSQAM-SLSTFPTAVITAT-PSIRSRSLGSWKVMRPLHSFTLPCFQLKHPP 215
            ++ A +  +++Q M SL+  P+ + + T P++  R +  ++    LH FT P  ++KHPP
Sbjct: 80   SIKAAKVSNVNQGMASLAQAPSTMASVTVPNVHHRGMKLFQPSISLHGFTFPHIRIKHPP 139

Query: 216  IFCTKLSSWEPSPTTYAPSEXXXXXXXXGNFLQKGANIFETMNAETPTETMVSNKEE--G 389
            + CTKL+ WEPSP TY+P++         +FL+  +NIFET+N++   E  V+N EE   
Sbjct: 140  VCCTKLTPWEPSPVTYSPTDEKG-----SDFLRGTSNIFETLNSDDTAEAPVTNTEELIH 194

Query: 390  TKEQASVQSQPLKWPMWLLGPSILLVTGIVPTLWLPLSSVFLGANTASLLSLVGLDCIFN 569
            T  Q+S Q Q LKWPMWLLGPS+LL TG+VPTLWLP+SS+FLG N ASLLSL+GLDCIFN
Sbjct: 195  TSNQSSGQLQFLKWPMWLLGPSLLLATGMVPTLWLPISSIFLGPNIASLLSLIGLDCIFN 254

Query: 570  IGATLFLLMADACARPKNASQTLTSQAPLSYKFWNMVASVMGCLIPLGMLFASQKGLLQT 749
            +GATLFLLMADACARPKN +Q L S+AP SY+FWN+VA++ G ++PL + F SQ G  Q 
Sbjct: 255  LGATLFLLMADACARPKNLAQPLNSKAPFSYQFWNVVATITGFVVPLIVFFGSQNGFFQP 314

Query: 750  QLPLMSFGVXXXXXXXXXSIQMLTEMLTWYWQSPVWLMTPVVYEAYRVLQLLRGLKLSAE 929
            QLP + F V         S+Q+LTEMLTW+WQSPVWL+TPVVYEAYRVLQL+RGLKL AE
Sbjct: 315  QLPFIPFAVLMGPYLLLLSVQILTEMLTWHWQSPVWLVTPVVYEAYRVLQLMRGLKLGAE 374

Query: 930  IGAPMWIVETIRGLVSWWVLILGVQLMRVAWFAGFSARARQQ 1055
            + AP W++ T+RGLV WWVLILG+Q+MRVAWFAGF+A A  Q
Sbjct: 375  LSAPAWMMHTVRGLVCWWVLILGMQVMRVAWFAGFTAGAWPQ 416


>ref|XP_003633924.1| PREDICTED: uncharacterized protein LOC100854105 [Vitis vinifera]
          Length = 332

 Score =  396 bits (1017), Expect = e-108
 Identities = 192/327 (58%), Positives = 244/327 (74%), Gaps = 3/327 (0%)
 Frame = +3

Query: 84   SLSTFPTAVITAT-PSIRSRSLGSWKVMRPLHSFTLPCFQLKHPPIFCTKLSSWEPSPTT 260
            SL+  P+ + + T P++  R +  ++    LH FT P  ++KHPP+ CTKL+ WEPSP T
Sbjct: 3    SLAQAPSTMASVTVPNVHHRGMKLFQPSISLHGFTFPHIRIKHPPVCCTKLTPWEPSPVT 62

Query: 261  YAPSEXXXXXXXXGNFLQKGANIFETMNAETPTETMVSNKEE--GTKEQASVQSQPLKWP 434
            Y+P++         +FL+  +NIFET+N++   E  V+N EE   T  Q+S Q Q LKWP
Sbjct: 63   YSPTDEKG-----SDFLRGTSNIFETLNSDDTAEAPVTNTEELIHTSNQSSGQLQFLKWP 117

Query: 435  MWLLGPSILLVTGIVPTLWLPLSSVFLGANTASLLSLVGLDCIFNIGATLFLLMADACAR 614
            MWLLGPS+LL TG+VPTLWLP+SS+FLG N ASLLSL+GLDCIFN+GATLFLLMADACAR
Sbjct: 118  MWLLGPSLLLATGMVPTLWLPISSIFLGPNIASLLSLIGLDCIFNLGATLFLLMADACAR 177

Query: 615  PKNASQTLTSQAPLSYKFWNMVASVMGCLIPLGMLFASQKGLLQTQLPLMSFGVXXXXXX 794
            PKN +Q L S+AP SY+FWN+VA++ G ++PL + F SQ G  Q QLP + F V      
Sbjct: 178  PKNLAQPLNSKAPFSYQFWNVVATITGFVVPLIVFFGSQNGFFQPQLPFIPFAVLMGPYL 237

Query: 795  XXXSIQMLTEMLTWYWQSPVWLMTPVVYEAYRVLQLLRGLKLSAEIGAPMWIVETIRGLV 974
               S+Q+LTEMLTW+WQSPVWL+TPVVYEAYRVLQL+RGLKL AE+ AP W++ T+RGLV
Sbjct: 238  LLLSVQILTEMLTWHWQSPVWLVTPVVYEAYRVLQLMRGLKLGAELSAPAWMMHTVRGLV 297

Query: 975  SWWVLILGVQLMRVAWFAGFSARARQQ 1055
             WWVLILG+Q+MRVAWFAGF+A A  Q
Sbjct: 298  CWWVLILGMQVMRVAWFAGFTAGAWPQ 324


>gb|ABK96523.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 332

 Score =  375 bits (964), Expect = e-101
 Identities = 187/321 (58%), Positives = 227/321 (70%), Gaps = 2/321 (0%)
 Frame = +3

Query: 99   PTAVITATPSIRSRSLGSWKVMRPLHSFTLPCFQLKHPPIFCTKLSSWEPSPTTYAPSEX 278
            PT        +  R L     +   H    P   + H  + C KL+ WEPSP TYAP+  
Sbjct: 9    PTMSTINAHQVHLRKLKLLSNLNMHHGLRFPRIHVNHTTVCCAKLTPWEPSPVTYAPT-- 66

Query: 279  XXXXXXXGNFLQKGANIFETMNAETPTETMVSNKEE--GTKEQASVQSQPLKWPMWLLGP 452
                   GN L+K +NIFET+ +E   E   +N EE   TK ++ VQ Q LKWPMWLLGP
Sbjct: 67   ---IDASGNLLKKTSNIFETLKSEDTAEAPATNSEELTDTKNRSLVQFQFLKWPMWLLGP 123

Query: 453  SILLVTGIVPTLWLPLSSVFLGANTASLLSLVGLDCIFNIGATLFLLMADACARPKNASQ 632
            S+LL TG+VPTLWLPLSSVFLG N ASLLSL+GLDCIFN+GATLFLLMAD+C+R KN +Q
Sbjct: 124  SLLLTTGMVPTLWLPLSSVFLGPNIASLLSLIGLDCIFNLGATLFLLMADSCSRSKNQAQ 183

Query: 633  TLTSQAPLSYKFWNMVASVMGCLIPLGMLFASQKGLLQTQLPLMSFGVXXXXXXXXXSIQ 812
            T  S+ PLSYKFWN+VA+V G +IPL  L  SQKG L  QLP + F V         S+Q
Sbjct: 184  TCNSKPPLSYKFWNVVATVSGFVIPLMALLGSQKGTLLPQLPFIPFAVLLGPYMLLLSVQ 243

Query: 813  MLTEMLTWYWQSPVWLMTPVVYEAYRVLQLLRGLKLSAEIGAPMWIVETIRGLVSWWVLI 992
            +LTE+LTW+WQSPVWL+TPVVYE+YR+LQL+RGLKL AE+ AP W++  IRGLVSWW+LI
Sbjct: 244  ILTELLTWHWQSPVWLVTPVVYESYRLLQLMRGLKLGAELSAPTWMLHMIRGLVSWWILI 303

Query: 993  LGVQLMRVAWFAGFSARARQQ 1055
            LGVQLM VAWFAGF+AR++QQ
Sbjct: 304  LGVQLMSVAWFAGFAARSQQQ 324


>ref|XP_002511656.1| conserved hypothetical protein [Ricinus communis]
            gi|223548836|gb|EEF50325.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 342

 Score =  367 bits (943), Expect = 3e-99
 Identities = 181/281 (64%), Positives = 211/281 (75%)
 Frame = +3

Query: 213  PIFCTKLSSWEPSPTTYAPSEXXXXXXXXGNFLQKGANIFETMNAETPTETMVSNKEEGT 392
            P  CTKL  WEPSP TY P++        G+FL+K +NIFETM++   TE   S +   T
Sbjct: 60   PFCCTKLPPWEPSPVTYVPTDDAA-----GSFLKKSSNIFETMDSSDGTEAN-SEEHSDT 113

Query: 393  KEQASVQSQPLKWPMWLLGPSILLVTGIVPTLWLPLSSVFLGANTASLLSLVGLDCIFNI 572
            K Q   Q Q LKWPMWLLGPS+LL TG+VPTLWLPLSS+FLG N ASLLSL+GLDCIFNI
Sbjct: 114  KNQPLTQFQFLKWPMWLLGPSLLLTTGMVPTLWLPLSSIFLGPNIASLLSLIGLDCIFNI 173

Query: 573  GATLFLLMADACARPKNASQTLTSQAPLSYKFWNMVASVMGCLIPLGMLFASQKGLLQTQ 752
            GATLFLLMAD+ +RPK+ +Q   S+ P SYK WNM ASV G + PL ML  SQ G LQ Q
Sbjct: 174  GATLFLLMADSISRPKSLAQAGNSKPPFSYKLWNMAASVSGFVFPLMMLLGSQNGSLQPQ 233

Query: 753  LPLMSFGVXXXXXXXXXSIQMLTEMLTWYWQSPVWLMTPVVYEAYRVLQLLRGLKLSAEI 932
            LP +SF V         S+Q+LTEMLTW+WQSPVWLMTPVVYEAYRVLQL+RGLKL AE+
Sbjct: 234  LPFISFTVLLGPYLLLLSVQILTEMLTWHWQSPVWLMTPVVYEAYRVLQLMRGLKLGAEL 293

Query: 933  GAPMWIVETIRGLVSWWVLILGVQLMRVAWFAGFSARARQQ 1055
             AP W++  IRGLV WW+L+LG+QLMRVAWFAGF+ARA QQ
Sbjct: 294  SAPAWMMHMIRGLVCWWILVLGIQLMRVAWFAGFTARAHQQ 334


>ref|XP_003517021.1| PREDICTED: uncharacterized protein LOC100779126 [Glycine max]
          Length = 343

 Score =  365 bits (937), Expect = 1e-98
 Identities = 182/325 (56%), Positives = 228/325 (70%), Gaps = 4/325 (1%)
 Frame = +3

Query: 129  IRSRSLGSWKV--MRPLHSFTLPCFQLKHPPIFCTKLSSWEPSPTTYAPSEXXXXXXXXG 302
            + SRS G  K   +  L     P   +    I CTKL+ WE SP TYAP++         
Sbjct: 23   VHSRSQGLLKSGKLSQLQGSAFPSIHINQSCICCTKLTPWESSPVTYAPTDNQSD----- 77

Query: 303  NFLQKGANIFETMNAETPTETMVSNKEE--GTKEQASVQSQPLKWPMWLLGPSILLVTGI 476
             FL + ANIFET+ +    E+ ++N E    T  Q  +Q Q  KWP+WLLGPSILL TG+
Sbjct: 78   TFLPQSANIFETLESSKTAESPIANAEGVLETGSQPGLQFQFFKWPLWLLGPSILLATGM 137

Query: 477  VPTLWLPLSSVFLGANTASLLSLVGLDCIFNIGATLFLLMADACARPKNASQTLTSQAPL 656
            VPTLWLP+SS+FLG N ASLLSL+GLDCIFN+GATLFLLMADAC+RPK+ +Q   S+AP 
Sbjct: 138  VPTLWLPISSIFLGTNIASLLSLIGLDCIFNLGATLFLLMADACSRPKSLTQDCKSKAPF 197

Query: 657  SYKFWNMVASVMGCLIPLGMLFASQKGLLQTQLPLMSFGVXXXXXXXXXSIQMLTEMLTW 836
            SY+FWN+VA++ G +IPL ++F SQKG LQ QLP + F V         S+Q LTEMLTW
Sbjct: 198  SYQFWNIVATLTGFIIPLLVMFGSQKGFLQPQLPFIPFAVLLGPYLLLLSVQFLTEMLTW 257

Query: 837  YWQSPVWLMTPVVYEAYRVLQLLRGLKLSAEIGAPMWIVETIRGLVSWWVLILGVQLMRV 1016
            +WQSPVWL+TPV+YE+YRVLQL+RGLKL  E+ AP W++ TIRGLV WWVLILG+QLMRV
Sbjct: 258  HWQSPVWLVTPVIYESYRVLQLMRGLKLGVELSAPAWVMHTIRGLVCWWVLILGLQLMRV 317

Query: 1017 AWFAGFSARARQQT*NSVVAPMSSD 1091
            AWFAG +AR R+Q  +S  +  + D
Sbjct: 318  AWFAGLAARTRKQQLSSDTSSANGD 342


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