BLASTX nr result

ID: Coptis21_contig00008254 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00008254
         (1410 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN69255.1| hypothetical protein VITISV_038799 [Vitis vinifera]   359   8e-97
ref|XP_002281710.1| PREDICTED: putative clathrin assembly protei...   358   2e-96
ref|XP_002521908.1| clathrin assembly protein, putative [Ricinus...   357   3e-96
ref|XP_002311553.1| predicted protein [Populus trichocarpa] gi|2...   347   4e-93
ref|XP_003531128.1| PREDICTED: putative clathrin assembly protei...   325   2e-86

>emb|CAN69255.1| hypothetical protein VITISV_038799 [Vitis vinifera]
          Length = 385

 Score =  359 bits (922), Expect = 8e-97
 Identities = 190/359 (52%), Positives = 248/359 (69%), Gaps = 8/359 (2%)
 Frame = +3

Query: 3    SIYIAKLSRKSSFRNPELEEAVIKATSHDESSVDYKNAQRIFTWIRTYPKFLKPVIWALS 182
            SI++A +SR+S  RNP+LE A+I+ATSHDE+ VDY+NAQR+F W++T P +LKP+IWALS
Sbjct: 16   SIWMASISRRSPNRNPDLEAAIIRATSHDETYVDYRNAQRVFAWVKTSPAYLKPLIWALS 75

Query: 183  NRMEKTRYWVVALKGLMLMHGIFCCKIPAVQRIGRLPFDFSNFVDAHSNTPRTWGLCAFI 362
             RMEKTR WVVALKGLMLMHG+FCCKIP +++IGRLPFD SNF D HS+  +TWG  +FI
Sbjct: 76   KRMEKTRSWVVALKGLMLMHGVFCCKIPIMEKIGRLPFDLSNFSDGHSHLCKTWGFNSFI 135

Query: 363  RAYFAFLDQKSAFGSFDNESD--------SLMGRTLKDLQRSQALLDMLLQVKPYSDGWS 518
            R+YFAFLDQ++ +   D + D          M + L  LQ+ Q LLDMLLQ+KP +   +
Sbjct: 136  RSYFAFLDQRAFWLDMDTKEDEEQTQKTNESMLQELIKLQQWQTLLDMLLQIKPEAXQMN 195

Query: 519  DTLILEAMDCIVIEIFDIYSSICNGIASFLVRIYAASQQEAEMALHVLYKATSQGEELDS 698
              LILEAMDCI+IEIFDIYS ICNG+A  LV+I+AA + EA MAL VL KAT+QG+ L  
Sbjct: 196  VGLILEAMDCIIIEIFDIYSRICNGVARILVKIHAAGKVEANMALKVLRKATAQGDRLSL 255

Query: 699  YFEFCRDIGVLNASEFPRVEKIPEEDIRDLERIIDEVKNREMNTTSLINVKEANLEQKQC 878
            YFE C+++GV NAS+F +VEKIP+EDIR+LE+II+ V          +  K   + QK  
Sbjct: 256  YFELCKNLGVRNASKFSKVEKIPQEDIRELEQIINGV----------LEDKAIVVRQKGS 305

Query: 879  REMENLKEGSVKLMKTIITSNWVVFDDEFKTDEERRGCVDGVGTSNYTNPFAASMSIPP 1055
             E     EGS    KT+I+  W  FD++ + ++E  G  DG       NP  A+ +  P
Sbjct: 306  IEEGKGTEGS---PKTVISKKWERFDEQLRGNKEGTGAPDGGKMIVAQNPSTATCNSRP 361


>ref|XP_002281710.1| PREDICTED: putative clathrin assembly protein At1g25240 [Vitis
            vinifera] gi|297737574|emb|CBI26775.3| unnamed protein
            product [Vitis vinifera]
          Length = 385

 Score =  358 bits (919), Expect = 2e-96
 Identities = 190/359 (52%), Positives = 248/359 (69%), Gaps = 8/359 (2%)
 Frame = +3

Query: 3    SIYIAKLSRKSSFRNPELEEAVIKATSHDESSVDYKNAQRIFTWIRTYPKFLKPVIWALS 182
            SI++A +SR+S  RNP+LE A+I+ATSHDE+ VDY+NAQR+F W++T P +LKP+IWALS
Sbjct: 16   SIWMASISRRSPNRNPDLEAAIIRATSHDETYVDYRNAQRVFAWVKTSPAYLKPLIWALS 75

Query: 183  NRMEKTRYWVVALKGLMLMHGIFCCKIPAVQRIGRLPFDFSNFVDAHSNTPRTWGLCAFI 362
             RMEKTR WVVALKGLMLMHG+FCCKIP +++IGRLPFD SNF D HS+  +TWG  +FI
Sbjct: 76   KRMEKTRSWVVALKGLMLMHGVFCCKIPIMEKIGRLPFDLSNFSDGHSHLCKTWGFNSFI 135

Query: 363  RAYFAFLDQKSAFGSFDNESD--------SLMGRTLKDLQRSQALLDMLLQVKPYSDGWS 518
            R+YFAFLDQ++ +   D + D          M + L  LQ+ Q LLDMLLQ+KP +   +
Sbjct: 136  RSYFAFLDQRAFWLDMDTKEDEEQTQKTNESMLQELIKLQQWQTLLDMLLQIKPEAAQMN 195

Query: 519  DTLILEAMDCIVIEIFDIYSSICNGIASFLVRIYAASQQEAEMALHVLYKATSQGEELDS 698
              LILEAMDCI+IEIFDIYS ICNG+A  LV+I+AA + EA MAL VL KAT+QG+ L  
Sbjct: 196  VGLILEAMDCIIIEIFDIYSRICNGVARILVKIHAAGKVEANMALKVLRKATAQGDRLSL 255

Query: 699  YFEFCRDIGVLNASEFPRVEKIPEEDIRDLERIIDEVKNREMNTTSLINVKEANLEQKQC 878
            YFE C+++GV NAS+F +VEKIP+EDIR+LE+II+ V          +  K   + QK  
Sbjct: 256  YFELCKNLGVRNASKFSKVEKIPQEDIRELEQIINGV----------LEDKAIVVRQKGS 305

Query: 879  REMENLKEGSVKLMKTIITSNWVVFDDEFKTDEERRGCVDGVGTSNYTNPFAASMSIPP 1055
             E     EGS    KT+I+  W  FD++ + ++E  G  DG       NP  A+ +  P
Sbjct: 306  IEEGKGTEGS---PKTVISKKWERFDEQLRGNKEGIGAPDGGKMIVAQNPSTATCNSRP 361


>ref|XP_002521908.1| clathrin assembly protein, putative [Ricinus communis]
           gi|223538946|gb|EEF40544.1| clathrin assembly protein,
           putative [Ricinus communis]
          Length = 379

 Score =  357 bits (917), Expect = 3e-96
 Identities = 184/328 (56%), Positives = 238/328 (72%), Gaps = 6/328 (1%)
 Frame = +3

Query: 3   SIYIAKLSRKSSFRNPELEEAVIKATSHDESSVDYKNAQRIFTWIRTYPKFLKPVIWALS 182
           SI +A LSR++S+RNP+LE A+IKAT+H+ES VDYKNAQR+F WIRT P  LKP+IWAL+
Sbjct: 16  SILVATLSRRTSYRNPDLEAAIIKATNHNESYVDYKNAQRVFAWIRTSPVSLKPLIWALT 75

Query: 183 NRMEKTRYWVVALKGLMLMHGIFCCKIPAVQRIGRLPFDFSNFVDAHSNTPRTWGLCAFI 362
            R+EKT+ WVVALKGLML+HG+FCCK  AV RIGRLPFD SNF D HS   ++WG  AFI
Sbjct: 76  ARIEKTQSWVVALKGLMLLHGVFCCKTQAVSRIGRLPFDLSNFTDGHSKPSKSWGFNAFI 135

Query: 363 RAYFAFLDQKSAF---GSFDNESDSLMGRTLKDLQRSQALLDMLLQVKPYSDGWSDTLIL 533
           RAY+A+LDQ+S F      +   D+ + + L  L+  Q+LLDMLLQ+KP ++   + LIL
Sbjct: 136 RAYYAYLDQRSLFLYEQRRERMEDNSVVQELIKLETWQSLLDMLLQIKPLANNMRECLIL 195

Query: 534 EAMDCIVIEIFDIYSSICNGIASFLVRIYAASQQEAEMALHVLYKATSQGEELDSYFEFC 713
           EAMDC++IEIFD+YS ICNGIA  L+ IY+A + EA ++L VL KA +QGE+L  YFEFC
Sbjct: 196 EAMDCVIIEIFDVYSRICNGIARILMGIYSAGKLEATLSLKVLQKAMNQGEDLALYFEFC 255

Query: 714 RDIGVLNASEFPRVEKIPEEDIRDLERIID---EVKNREMNTTSLINVKEANLEQKQCRE 884
           RD GV NA E P+V KIP+EDI+DLERII+   E KN + N  +       N    +   
Sbjct: 256 RDFGVFNAMEVPKVTKIPDEDIKDLERIINGVYEKKNIDENDNN------NNKNNNKIVA 309

Query: 885 MENLKEGSVKLMKTIITSNWVVFDDEFK 968
           ++  KE +++ +KTIIT  W VFD+E K
Sbjct: 310 IDEKKE-AIQKLKTIITDKWEVFDEELK 336


>ref|XP_002311553.1| predicted protein [Populus trichocarpa] gi|222851373|gb|EEE88920.1|
           predicted protein [Populus trichocarpa]
          Length = 380

 Score =  347 bits (890), Expect = 4e-93
 Identities = 179/329 (54%), Positives = 233/329 (70%), Gaps = 3/329 (0%)
 Frame = +3

Query: 3   SIYIAKLSRKSSFRNPELEEAVIKATSHDESSVDYKNAQRIFTWIRTYPKFLKPVIWALS 182
           S+    LSR++ +RN +LE A+IKATSHDES VDY+NAQR+FTWIRT P  LKP+IWAL+
Sbjct: 16  SLLAISLSRQTWYRNSDLEAAIIKATSHDESYVDYRNAQRVFTWIRTSPVSLKPLIWALT 75

Query: 183 NRMEKTRYWVVALKGLMLMHGIFCCKIPAVQRIGRLPFDFSNFVDAHSNTPRTWGLCAFI 362
            RMEKTR WVVA+KGLMLMHG+FCCK PAVQRIGRLPFD SNF D HS   + WG   FI
Sbjct: 76  TRMEKTRSWVVAIKGLMLMHGVFCCKTPAVQRIGRLPFDLSNFTDGHSKQAKMWGFNTFI 135

Query: 363 RAYFAFLDQKSA-FGSFDNESDSLMGRTLKDLQRSQALLDMLLQVKPYSDGWSDTLILEA 539
           R+YF+FLDQ+SA F    N+++  M + L  L+  Q+LLDMLLQ+KP +D   + LI EA
Sbjct: 136 RSYFSFLDQRSALFYVQQNQTEEPMVQELVKLRNWQSLLDMLLQIKPMADNMKEVLITEA 195

Query: 540 MDCIVIEIFDIYSSICNGIASFLVRIYAASQQEAEMALHVLYKATSQGEELDSYFEFCRD 719
           MDC++IEIFD+Y  IC GIA  L+ IY+A + EA MA  +L KA  QGE+L  YFEFCR+
Sbjct: 196 MDCVIIEIFDVYGRICKGIARVLMGIYSAGKLEATMAFKILQKAKVQGEDLALYFEFCRN 255

Query: 720 IGVLNASEFPRVEKIPEEDIRDLERIIDEVKNREMNTTSLINVKEAN--LEQKQCREMEN 893
            GV NA E P+V +IPE DI+DLERII+ V   E  +   +N ++ N  +  K+   +  
Sbjct: 256 FGVFNALEVPKVTQIPEADIKDLERIINGVP--EAKSYKNVNDEDDNKAIVVKEDVAIVE 313

Query: 894 LKEGSVKLMKTIITSNWVVFDDEFKTDEE 980
            KE + +L KTI+T  W +F+++   + +
Sbjct: 314 EKEPNSRL-KTIVTDKWEIFEEDVNINSQ 341


>ref|XP_003531128.1| PREDICTED: putative clathrin assembly protein At1g25240-like [Glycine
            max]
          Length = 404

 Score =  325 bits (832), Expect = 2e-86
 Identities = 174/377 (46%), Positives = 236/377 (62%), Gaps = 26/377 (6%)
 Frame = +3

Query: 3    SIYIAKLSRKSSFRNPELEEAVIKATSHDESSVDYKNAQRIFTWIRTYPKFLKPVIWALS 182
            SI+ AK SRK    NP+LE  VIKATSHD+  +D KN QR+F W+RT P +LKP++WALS
Sbjct: 16   SIWAAKFSRKGPLHNPDLETVVIKATSHDDHHIDSKNVQRVFQWLRTSPLYLKPLVWALS 75

Query: 183  NRMEKTRYWVVALKGLMLMHGIFCCKIPAVQRIGRLPFDFSNFVDAHSNTPRTWGLCAFI 362
             RM+KTR WVVALKGLML+HGI+CC IP V R+GRLPFD SNF D H +  + W    F+
Sbjct: 76   MRMQKTRSWVVALKGLMLIHGIYCCDIPVVNRMGRLPFDLSNFSDGHLSPAKAWSFNGFV 135

Query: 363  RAYFAFLDQKSAFGSFD-------------NESDSLMGRTLKDLQRSQALLDMLLQVKPY 503
            RAYFA+LDQ+S+F S +              E +  +   L+ LQ+ Q ++DMLLQ++P 
Sbjct: 136  RAYFAYLDQRSSFVSSEVKQKKNVSNNKKTEEVEETLMEELEKLQKLQGMIDMLLQIRPK 195

Query: 504  SDGWSDTLILEAMDCIVIEIFDIYSSICNGIASFLVRIY-AASQQEAEMALHVLYKATSQ 680
             +  +  LILEAMDCI++E+F +YS  CN IA  LVRIY    + EA + L VL KA+ Q
Sbjct: 196  DENLNIGLILEAMDCIIVEVFGVYSKFCNKIAKVLVRIYEVGGKMEANIGLQVLQKASIQ 255

Query: 681  GEELDSYFEFCRDIGVLNASEFPRVEKIPEEDIRDLERIIDEVKNREMNTTSLINVKEAN 860
             EE+  +F+ C+DIGVLNAS+ P++++I  EDI+DLERII+   +++      +   E N
Sbjct: 256  VEEISLFFDLCKDIGVLNASQCPKIDRISPEDIQDLERIINGASSKK--GCGFVGNDEDN 313

Query: 861  LEQKQCRE-----MENLKEGSVKLMKTIITSNWVVFDDEF-------KTDEERRGCVDGV 1004
             +    R+     M + +E S   + T+IT  W VFDD+          +    G  D +
Sbjct: 314  NKAIVVRDCSSTAMVSQQEESENGLMTVITQQWEVFDDDHVIVGAKGMDNVSNNGAKDII 373

Query: 1005 GTSNYTNPFAASMSIPP 1055
            GT+  TNPF  S SI P
Sbjct: 374  GTT--TNPFEESYSIVP 388


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