BLASTX nr result

ID: Coptis21_contig00008242 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00008242
         (521 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003532109.1| PREDICTED: glutamyl-tRNA(Gln) amidotransfera...   280   1e-73
ref|XP_002525893.1| glutamyl-tRNA(gln) amidotransferase subunit ...   280   1e-73
ref|XP_003599919.1| Glutamyl-tRNA(Gln) amidotransferase subunit ...   275   2e-72
ref|XP_002278150.1| PREDICTED: glutamyl-tRNA(Gln) amidotransfera...   273   8e-72
ref|XP_003553116.1| PREDICTED: LOW QUALITY PROTEIN: glutamyl-tRN...   272   2e-71

>ref|XP_003532109.1| PREDICTED: glutamyl-tRNA(Gln) amidotransferase subunit A-like
           [Glycine max]
          Length = 543

 Score =  280 bits (715), Expect = 1e-73
 Identities = 132/164 (80%), Positives = 150/164 (91%)
 Frame = -3

Query: 519 VRYGNQVSAEELSTLYGASRANGFGPEVKMRILMGTYALSAGYYDAYYKRAQQVRTLVRE 340
           +RYGNQV A+EL +LYG SRA GFG EVKMRILMGTYALSAGYYDAYYKRAQQVRT++R 
Sbjct: 375 IRYGNQVYADELDSLYGGSRAQGFGSEVKMRILMGTYALSAGYYDAYYKRAQQVRTIIRN 434

Query: 339 SFRTALQENDVLISPAAPSAAYKIGEKKDDPLAMYAGDIMTVNVNLAGLPALVLPCGFAD 160
           SF+ AL +ND+LISPAAPSAAYKIGEKK+DPLAMYAGDIMTVNVNLAGLPALVLPCGF +
Sbjct: 435 SFKEALSQNDILISPAAPSAAYKIGEKKNDPLAMYAGDIMTVNVNLAGLPALVLPCGFVE 494

Query: 159 SGPAGLPIGLQIIGAAFDEGNLVRVGHIFEQTLQGCRFIPPSAV 28
            GP+GLP+GLQ+IGAAF+EG L+RVGHIFEQTL+ C+F+PP  V
Sbjct: 495 GGPSGLPVGLQMIGAAFNEGELLRVGHIFEQTLENCKFVPPIVV 538


>ref|XP_002525893.1| glutamyl-tRNA(gln) amidotransferase subunit A, putative [Ricinus
           communis] gi|223534807|gb|EEF36497.1| glutamyl-tRNA(gln)
           amidotransferase subunit A, putative [Ricinus communis]
          Length = 561

 Score =  280 bits (715), Expect = 1e-73
 Identities = 134/161 (83%), Positives = 149/161 (92%)
 Frame = -3

Query: 519 VRYGNQVSAEELSTLYGASRANGFGPEVKMRILMGTYALSAGYYDAYYKRAQQVRTLVRE 340
           VRYGNQV A+EL+ LYG SRA GFGPEVKMRILMGTYALSAGYYDAYYKRAQQVRTL+++
Sbjct: 394 VRYGNQVGADELNGLYGDSRAKGFGPEVKMRILMGTYALSAGYYDAYYKRAQQVRTLIQK 453

Query: 339 SFRTALQENDVLISPAAPSAAYKIGEKKDDPLAMYAGDIMTVNVNLAGLPALVLPCGFAD 160
           SF+ AL  ND+LISPAAPSAAYKIGEK++DPLAMYAGDIMTVNVNLAGLPALVLPCGF +
Sbjct: 454 SFKAALDANDILISPAAPSAAYKIGEKRNDPLAMYAGDIMTVNVNLAGLPALVLPCGFVE 513

Query: 159 SGPAGLPIGLQIIGAAFDEGNLVRVGHIFEQTLQGCRFIPP 37
            GPA LP+GLQ+IGAAFDE  L++VGHIFEQTLQGCRF+PP
Sbjct: 514 GGPARLPVGLQMIGAAFDEEKLLKVGHIFEQTLQGCRFVPP 554


>ref|XP_003599919.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Medicago truncatula]
           gi|355488967|gb|AES70170.1| Glutamyl-tRNA(Gln)
           amidotransferase subunit A [Medicago truncatula]
          Length = 537

 Score =  275 bits (704), Expect = 2e-72
 Identities = 131/161 (81%), Positives = 148/161 (91%)
 Frame = -3

Query: 519 VRYGNQVSAEELSTLYGASRANGFGPEVKMRILMGTYALSAGYYDAYYKRAQQVRTLVRE 340
           +RYGNQV AEEL++LYG SRA G G EVKMRILMGTYALSAGYYDAYYKRAQQVRT++R 
Sbjct: 370 IRYGNQVYAEELNSLYGESRAKGLGSEVKMRILMGTYALSAGYYDAYYKRAQQVRTIIRN 429

Query: 339 SFRTALQENDVLISPAAPSAAYKIGEKKDDPLAMYAGDIMTVNVNLAGLPALVLPCGFAD 160
           SF+ AL + D+LISPAAPSAAYKIGEKK+DPLAMYAGDIMTVNVNLAGLPALVLPCGF +
Sbjct: 430 SFKEALDQYDILISPAAPSAAYKIGEKKNDPLAMYAGDIMTVNVNLAGLPALVLPCGFIE 489

Query: 159 SGPAGLPIGLQIIGAAFDEGNLVRVGHIFEQTLQGCRFIPP 37
           +GP GLP+GLQ+IGAAF+EG L+RVGHIFEQTL+ CRF+PP
Sbjct: 490 NGPTGLPVGLQMIGAAFNEGELLRVGHIFEQTLENCRFVPP 530


>ref|XP_002278150.1| PREDICTED: glutamyl-tRNA(Gln) amidotransferase subunit A,
           chloroplastic/mitochondrial [Vitis vinifera]
           gi|353558711|sp|E0CTY1.1|GATA_VITVI RecName:
           Full=Glutamyl-tRNA(Gln) amidotransferase subunit A,
           chloroplastic/mitochondrial; Short=Glu-AdT subunit A;
           Flags: Precursor gi|302143486|emb|CBI22047.3| unnamed
           protein product [Vitis vinifera]
          Length = 546

 Score =  273 bits (699), Expect = 8e-72
 Identities = 133/169 (78%), Positives = 149/169 (88%)
 Frame = -3

Query: 519 VRYGNQVSAEELSTLYGASRANGFGPEVKMRILMGTYALSAGYYDAYYKRAQQVRTLVRE 340
           VRYG+QV A+ L++LYG SRA GFGPEVKMRIL GTYALSAGYYDAYYKRAQQVRTLV++
Sbjct: 378 VRYGSQVGADRLNSLYGDSRAKGFGPEVKMRILTGTYALSAGYYDAYYKRAQQVRTLVQK 437

Query: 339 SFRTALQENDVLISPAAPSAAYKIGEKKDDPLAMYAGDIMTVNVNLAGLPALVLPCGFAD 160
           SF+ AL END+LISPAAPS AY IGEKK+DPLAMYAGDIMTVNVNLAGLPALVLPCGF +
Sbjct: 438 SFKAALNENDILISPAAPSPAYSIGEKKNDPLAMYAGDIMTVNVNLAGLPALVLPCGFVE 497

Query: 159 SGPAGLPIGLQIIGAAFDEGNLVRVGHIFEQTLQGCRFIPPSAV*GFAC 13
            GPAGLP+GLQ+IGAAFDE  L++VGHIFEQ L+G +FIPP    G AC
Sbjct: 498 GGPAGLPVGLQMIGAAFDEEKLLKVGHIFEQMLKGYKFIPPLLADGIAC 546


>ref|XP_003553116.1| PREDICTED: LOW QUALITY PROTEIN: glutamyl-tRNA(Gln) amidotransferase
           subunit A-like, partial [Glycine max]
          Length = 506

 Score =  272 bits (696), Expect = 2e-71
 Identities = 129/161 (80%), Positives = 146/161 (90%)
 Frame = -3

Query: 519 VRYGNQVSAEELSTLYGASRANGFGPEVKMRILMGTYALSAGYYDAYYKRAQQVRTLVRE 340
           +RYGNQV A+EL +LYG SRA GFG EVKMRILMGTY+LSAGYYDAYYKRAQQVRT++R 
Sbjct: 338 IRYGNQVYADELDSLYGGSRAKGFGSEVKMRILMGTYSLSAGYYDAYYKRAQQVRTIIRN 397

Query: 339 SFRTALQENDVLISPAAPSAAYKIGEKKDDPLAMYAGDIMTVNVNLAGLPALVLPCGFAD 160
           SF+ AL +ND+LISPAAPSAAYKIGEKK+ PLAMYAGDIMTVNVNLAGLPA VLPCGF +
Sbjct: 398 SFKEALNQNDILISPAAPSAAYKIGEKKNSPLAMYAGDIMTVNVNLAGLPAXVLPCGFVE 457

Query: 159 SGPAGLPIGLQIIGAAFDEGNLVRVGHIFEQTLQGCRFIPP 37
            G AGLP+GLQ+IGAAF+EG L+RVGHIFEQTL+ CRF+PP
Sbjct: 458 GGHAGLPVGLQMIGAAFNEGELLRVGHIFEQTLENCRFVPP 498


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