BLASTX nr result

ID: Coptis21_contig00008241 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00008241
         (682 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273712.2| PREDICTED: transcription initiation factor T...   224   2e-56
emb|CBI21835.3| unnamed protein product [Vitis vinifera]              224   2e-56
ref|XP_003533464.1| PREDICTED: transcription initiation factor T...   214   1e-53
ref|XP_003523903.1| PREDICTED: transcription initiation factor T...   213   3e-53
ref|XP_002323740.1| histone acetyltransferase [Populus trichocar...   211   1e-52

>ref|XP_002273712.2| PREDICTED: transcription initiation factor TFIID subunit 1-A-like
            [Vitis vinifera]
          Length = 2068

 Score =  224 bits (570), Expect = 2e-56
 Identities = 109/138 (78%), Positives = 121/138 (87%)
 Frame = -1

Query: 682  YGAEYAPQSKRRRGEAGEVGLANILEGIVDSLKDATEVSYLFLKPVSKKEAPDYHDIIEH 503
            +GA+Y P +KRRRG  GEVGL+N+LE IVDSL+D  EVSYLFLKPVSKKEAPDY DII  
Sbjct: 1933 FGADYGPPTKRRRG--GEVGLSNVLESIVDSLRDRYEVSYLFLKPVSKKEAPDYLDIIRD 1990

Query: 502  PMDLSTIKEKVRKMKYKDREVFRHDVWQITFNAHRYNDGRNPGIPPLADQLLELCDYLLD 323
            PMDLSTI+EKVRKM+YK+RE FRHDVWQIT+NAH+YNDGRNPGIPPLADQLLELCDYLL 
Sbjct: 1991 PMDLSTIREKVRKMEYKNREDFRHDVWQITYNAHKYNDGRNPGIPPLADQLLELCDYLLS 2050

Query: 322  QNDERLAEAEAGIEIRPT 269
            +ND  L EAEAGIE R T
Sbjct: 2051 ENDASLTEAEAGIEYRDT 2068


>emb|CBI21835.3| unnamed protein product [Vitis vinifera]
          Length = 1798

 Score =  224 bits (570), Expect = 2e-56
 Identities = 109/138 (78%), Positives = 121/138 (87%)
 Frame = -1

Query: 682  YGAEYAPQSKRRRGEAGEVGLANILEGIVDSLKDATEVSYLFLKPVSKKEAPDYHDIIEH 503
            +GA+Y P +KRRRG  GEVGL+N+LE IVDSL+D  EVSYLFLKPVSKKEAPDY DII  
Sbjct: 1663 FGADYGPPTKRRRG--GEVGLSNVLESIVDSLRDRYEVSYLFLKPVSKKEAPDYLDIIRD 1720

Query: 502  PMDLSTIKEKVRKMKYKDREVFRHDVWQITFNAHRYNDGRNPGIPPLADQLLELCDYLLD 323
            PMDLSTI+EKVRKM+YK+RE FRHDVWQIT+NAH+YNDGRNPGIPPLADQLLELCDYLL 
Sbjct: 1721 PMDLSTIREKVRKMEYKNREDFRHDVWQITYNAHKYNDGRNPGIPPLADQLLELCDYLLS 1780

Query: 322  QNDERLAEAEAGIEIRPT 269
            +ND  L EAEAGIE R T
Sbjct: 1781 ENDASLTEAEAGIEYRDT 1798


>ref|XP_003533464.1| PREDICTED: transcription initiation factor TFIID subunit 1-A-like
            [Glycine max]
          Length = 1910

 Score =  214 bits (545), Expect = 1e-53
 Identities = 102/136 (75%), Positives = 118/136 (86%), Gaps = 1/136 (0%)
 Frame = -1

Query: 679  GAEYAPQSKRRRGEAGEVGLANILEGIVDSL-KDATEVSYLFLKPVSKKEAPDYHDIIEH 503
            GA+Y P +KRRRG  GEVGLANILE +VD++ KD  ++SYLFLKPVSKKEAPDY D+IE 
Sbjct: 1773 GADYMPPTKRRRGGGGEVGLANILESVVDTIVKDRYDLSYLFLKPVSKKEAPDYLDVIER 1832

Query: 502  PMDLSTIKEKVRKMKYKDREVFRHDVWQITFNAHRYNDGRNPGIPPLADQLLELCDYLLD 323
            PMDLS I+E+VR M+YK RE FRHD+WQITFNAH+YNDGRNPGIPPLAD LLE CDYLL+
Sbjct: 1833 PMDLSRIRERVRNMEYKSREDFRHDMWQITFNAHKYNDGRNPGIPPLADMLLEYCDYLLN 1892

Query: 322  QNDERLAEAEAGIEIR 275
            +ND+ L EAEAGIEIR
Sbjct: 1893 ENDDSLTEAEAGIEIR 1908


>ref|XP_003523903.1| PREDICTED: transcription initiation factor TFIID subunit 1-A-like
            [Glycine max]
          Length = 1919

 Score =  213 bits (542), Expect = 3e-53
 Identities = 102/136 (75%), Positives = 117/136 (86%), Gaps = 1/136 (0%)
 Frame = -1

Query: 679  GAEYAPQSKRRRGEAGEVGLANILEGIVDSL-KDATEVSYLFLKPVSKKEAPDYHDIIEH 503
            GA+Y P +KRRRG  GEVGLANILE +VD++ KD  ++SYLFLKPVSKKEAPDY DIIE 
Sbjct: 1782 GADYMPPTKRRRGGGGEVGLANILESVVDTIVKDRYDLSYLFLKPVSKKEAPDYLDIIER 1841

Query: 502  PMDLSTIKEKVRKMKYKDREVFRHDVWQITFNAHRYNDGRNPGIPPLADQLLELCDYLLD 323
            PMDLS I+E+VR M+YK RE FRHD+WQITFNAH+YNDGRNPGIPPLAD LLE CDYLL+
Sbjct: 1842 PMDLSRIRERVRNMEYKSREDFRHDMWQITFNAHKYNDGRNPGIPPLADMLLEYCDYLLN 1901

Query: 322  QNDERLAEAEAGIEIR 275
            +ND+ L EAE GIEIR
Sbjct: 1902 ENDDSLTEAETGIEIR 1917


>ref|XP_002323740.1| histone acetyltransferase [Populus trichocarpa]
            gi|222866742|gb|EEF03873.1| histone acetyltransferase
            [Populus trichocarpa]
          Length = 1857

 Score =  211 bits (537), Expect = 1e-52
 Identities = 103/133 (77%), Positives = 114/133 (85%)
 Frame = -1

Query: 682  YGAEYAPQSKRRRGEAGEVGLANILEGIVDSLKDATEVSYLFLKPVSKKEAPDYHDIIEH 503
            YGA+Y P +KRRR   GEVGLANILEGIVD+LKD  EVSYLFLKPV KKEAPDY DII+ 
Sbjct: 1727 YGADYTPATKRRR--VGEVGLANILEGIVDALKDRVEVSYLFLKPVPKKEAPDYLDIIKR 1784

Query: 502  PMDLSTIKEKVRKMKYKDREVFRHDVWQITFNAHRYNDGRNPGIPPLADQLLELCDYLLD 323
            PMDLSTI++K RKM+YKDR  FRHD+WQI +NAH YNDGRNPGIPPLADQLLELCDYLL 
Sbjct: 1785 PMDLSTIRDKARKMEYKDRNEFRHDMWQIAYNAHVYNDGRNPGIPPLADQLLELCDYLLM 1844

Query: 322  QNDERLAEAEAGI 284
            +  E L+EAEAGI
Sbjct: 1845 EKQESLSEAEAGI 1857


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