BLASTX nr result
ID: Coptis21_contig00008239
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00008239 (960 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002303289.1| predicted protein [Populus trichocarpa] gi|2... 174 4e-41 ref|XP_002284463.1| PREDICTED: dynein light chain LC6, flagellar... 174 4e-41 ref|XP_002516031.1| cytoplasmic dynein light chain, putative [Ri... 172 1e-40 ref|XP_004141842.1| PREDICTED: rho guanine nucleotide exchange f... 164 3e-38 ref|XP_002894369.1| dynein light chain type 1 family protein [Ar... 164 4e-38 >ref|XP_002303289.1| predicted protein [Populus trichocarpa] gi|222840721|gb|EEE78268.1| predicted protein [Populus trichocarpa] Length = 94 Score = 174 bits (440), Expect = 4e-41 Identities = 80/93 (86%), Positives = 89/93 (95%) Frame = -1 Query: 588 MLEGKALVEDTDMPMKMQMHAMTSASQALDVYDVLDCKSIAAYIKKEFDMRYGTGWQCVV 409 MLEGKAL+EDTDMP+KMQ+ AM SASQALD+YDVLDCKS+A++IKKEFD+RYG GWQCVV Sbjct: 1 MLEGKALIEDTDMPLKMQIQAMASASQALDLYDVLDCKSVASHIKKEFDLRYGGGWQCVV 60 Query: 408 GSNFGCFFTHSQGTFIYFALETLNFLIFKGASS 310 GSNFGCFFTHS+GTFIYF LETLNFLIFKGASS Sbjct: 61 GSNFGCFFTHSKGTFIYFTLETLNFLIFKGASS 93 >ref|XP_002284463.1| PREDICTED: dynein light chain LC6, flagellar outer arm [Vitis vinifera] gi|297743256|emb|CBI36123.3| unnamed protein product [Vitis vinifera] Length = 95 Score = 174 bits (440), Expect = 4e-41 Identities = 83/94 (88%), Positives = 88/94 (93%) Frame = -1 Query: 588 MLEGKALVEDTDMPMKMQMHAMTSASQALDVYDVLDCKSIAAYIKKEFDMRYGTGWQCVV 409 MLEGKAL+EDTDMP+KMQ+ AM ASQALD+YDVLD KSIAAYIKKEFDM YGTGWQCVV Sbjct: 1 MLEGKALIEDTDMPVKMQIQAMACASQALDIYDVLDYKSIAAYIKKEFDMIYGTGWQCVV 60 Query: 408 GSNFGCFFTHSQGTFIYFALETLNFLIFKGASSS 307 GSNFGCFFTHS+GTFIYF LETLNFLIFKGASSS Sbjct: 61 GSNFGCFFTHSKGTFIYFTLETLNFLIFKGASSS 94 >ref|XP_002516031.1| cytoplasmic dynein light chain, putative [Ricinus communis] gi|223544936|gb|EEF46451.1| cytoplasmic dynein light chain, putative [Ricinus communis] Length = 112 Score = 172 bits (436), Expect = 1e-40 Identities = 81/96 (84%), Positives = 89/96 (92%) Frame = -1 Query: 588 MLEGKALVEDTDMPMKMQMHAMTSASQALDVYDVLDCKSIAAYIKKEFDMRYGTGWQCVV 409 MLEGKAL+EDTDMP+KMQ+ AM ASQALD+YDVLDCKSIAA+IKKEFDM+YG GWQCVV Sbjct: 1 MLEGKALIEDTDMPVKMQIQAMACASQALDLYDVLDCKSIAAHIKKEFDMKYGGGWQCVV 60 Query: 408 GSNFGCFFTHSQGTFIYFALETLNFLIFKGASSSPA 301 GSNFGCFFTHS+G+FIYF LETLNFLIFKGASS A Sbjct: 61 GSNFGCFFTHSKGSFIYFTLETLNFLIFKGASSPSA 96 >ref|XP_004141842.1| PREDICTED: rho guanine nucleotide exchange factor 8-like [Cucumis sativus] Length = 676 Score = 164 bits (415), Expect = 3e-38 Identities = 76/97 (78%), Positives = 89/97 (91%) Frame = -1 Query: 588 MLEGKALVEDTDMPMKMQMHAMTSASQALDVYDVLDCKSIAAYIKKEFDMRYGTGWQCVV 409 MLEGKALV+DTDMP KMQ+ AM +AS+ALD+YDV DCKSIAA+IKK+FD +YG+GWQCVV Sbjct: 1 MLEGKALVQDTDMPGKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDNKYGSGWQCVV 60 Query: 408 GSNFGCFFTHSQGTFIYFALETLNFLIFKGASSSPAY 298 GSNFGCFFTHS+G+FIYF LETLNFLIFKG +SS A+ Sbjct: 61 GSNFGCFFTHSKGSFIYFKLETLNFLIFKGVTSSGAF 97 >ref|XP_002894369.1| dynein light chain type 1 family protein [Arabidopsis lyrata subsp. lyrata] gi|297340211|gb|EFH70628.1| dynein light chain type 1 family protein [Arabidopsis lyrata subsp. lyrata] Length = 94 Score = 164 bits (414), Expect = 4e-38 Identities = 76/93 (81%), Positives = 86/93 (92%) Frame = -1 Query: 588 MLEGKALVEDTDMPMKMQMHAMTSASQALDVYDVLDCKSIAAYIKKEFDMRYGTGWQCVV 409 MLEGKA+VED+DMP+KMQM AM+ ASQALD++DV DCKSIA +IKKEFD RYG+GWQCVV Sbjct: 1 MLEGKAMVEDSDMPVKMQMQAMSFASQALDLFDVFDCKSIAGHIKKEFDERYGSGWQCVV 60 Query: 408 GSNFGCFFTHSQGTFIYFALETLNFLIFKGASS 310 GSNFGCFFTHS+GTFIYF LETL FLIFKGAS+ Sbjct: 61 GSNFGCFFTHSKGTFIYFQLETLKFLIFKGAST 93