BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00008239
         (960 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303289.1| predicted protein [Populus trichocarpa] gi|2...   174   4e-41
ref|XP_002284463.1| PREDICTED: dynein light chain LC6, flagellar...   174   4e-41
ref|XP_002516031.1| cytoplasmic dynein light chain, putative [Ri...   172   1e-40
ref|XP_004141842.1| PREDICTED: rho guanine nucleotide exchange f...   164   3e-38
ref|XP_002894369.1| dynein light chain type 1 family protein [Ar...   164   4e-38

>ref|XP_002303289.1| predicted protein [Populus trichocarpa] gi|222840721|gb|EEE78268.1|
           predicted protein [Populus trichocarpa]
          Length = 94

 Score =  174 bits (440), Expect = 4e-41
 Identities = 80/93 (86%), Positives = 89/93 (95%)
 Frame = -1

Query: 588 MLEGKALVEDTDMPMKMQMHAMTSASQALDVYDVLDCKSIAAYIKKEFDMRYGTGWQCVV 409
           MLEGKAL+EDTDMP+KMQ+ AM SASQALD+YDVLDCKS+A++IKKEFD+RYG GWQCVV
Sbjct: 1   MLEGKALIEDTDMPLKMQIQAMASASQALDLYDVLDCKSVASHIKKEFDLRYGGGWQCVV 60

Query: 408 GSNFGCFFTHSQGTFIYFALETLNFLIFKGASS 310
           GSNFGCFFTHS+GTFIYF LETLNFLIFKGASS
Sbjct: 61  GSNFGCFFTHSKGTFIYFTLETLNFLIFKGASS 93


>ref|XP_002284463.1| PREDICTED: dynein light chain LC6, flagellar outer arm [Vitis
           vinifera] gi|297743256|emb|CBI36123.3| unnamed protein
           product [Vitis vinifera]
          Length = 95

 Score =  174 bits (440), Expect = 4e-41
 Identities = 83/94 (88%), Positives = 88/94 (93%)
 Frame = -1

Query: 588 MLEGKALVEDTDMPMKMQMHAMTSASQALDVYDVLDCKSIAAYIKKEFDMRYGTGWQCVV 409
           MLEGKAL+EDTDMP+KMQ+ AM  ASQALD+YDVLD KSIAAYIKKEFDM YGTGWQCVV
Sbjct: 1   MLEGKALIEDTDMPVKMQIQAMACASQALDIYDVLDYKSIAAYIKKEFDMIYGTGWQCVV 60

Query: 408 GSNFGCFFTHSQGTFIYFALETLNFLIFKGASSS 307
           GSNFGCFFTHS+GTFIYF LETLNFLIFKGASSS
Sbjct: 61  GSNFGCFFTHSKGTFIYFTLETLNFLIFKGASSS 94


>ref|XP_002516031.1| cytoplasmic dynein light chain, putative [Ricinus communis]
           gi|223544936|gb|EEF46451.1| cytoplasmic dynein light
           chain, putative [Ricinus communis]
          Length = 112

 Score =  172 bits (436), Expect = 1e-40
 Identities = 81/96 (84%), Positives = 89/96 (92%)
 Frame = -1

Query: 588 MLEGKALVEDTDMPMKMQMHAMTSASQALDVYDVLDCKSIAAYIKKEFDMRYGTGWQCVV 409
           MLEGKAL+EDTDMP+KMQ+ AM  ASQALD+YDVLDCKSIAA+IKKEFDM+YG GWQCVV
Sbjct: 1   MLEGKALIEDTDMPVKMQIQAMACASQALDLYDVLDCKSIAAHIKKEFDMKYGGGWQCVV 60

Query: 408 GSNFGCFFTHSQGTFIYFALETLNFLIFKGASSSPA 301
           GSNFGCFFTHS+G+FIYF LETLNFLIFKGASS  A
Sbjct: 61  GSNFGCFFTHSKGSFIYFTLETLNFLIFKGASSPSA 96


>ref|XP_004141842.1| PREDICTED: rho guanine nucleotide exchange factor 8-like [Cucumis
           sativus]
          Length = 676

 Score =  164 bits (415), Expect = 3e-38
 Identities = 76/97 (78%), Positives = 89/97 (91%)
 Frame = -1

Query: 588 MLEGKALVEDTDMPMKMQMHAMTSASQALDVYDVLDCKSIAAYIKKEFDMRYGTGWQCVV 409
           MLEGKALV+DTDMP KMQ+ AM +AS+ALD+YDV DCKSIAA+IKK+FD +YG+GWQCVV
Sbjct: 1   MLEGKALVQDTDMPGKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDNKYGSGWQCVV 60

Query: 408 GSNFGCFFTHSQGTFIYFALETLNFLIFKGASSSPAY 298
           GSNFGCFFTHS+G+FIYF LETLNFLIFKG +SS A+
Sbjct: 61  GSNFGCFFTHSKGSFIYFKLETLNFLIFKGVTSSGAF 97


>ref|XP_002894369.1| dynein light chain type 1 family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297340211|gb|EFH70628.1| dynein light chain
           type 1 family protein [Arabidopsis lyrata subsp. lyrata]
          Length = 94

 Score =  164 bits (414), Expect = 4e-38
 Identities = 76/93 (81%), Positives = 86/93 (92%)
 Frame = -1

Query: 588 MLEGKALVEDTDMPMKMQMHAMTSASQALDVYDVLDCKSIAAYIKKEFDMRYGTGWQCVV 409
           MLEGKA+VED+DMP+KMQM AM+ ASQALD++DV DCKSIA +IKKEFD RYG+GWQCVV
Sbjct: 1   MLEGKAMVEDSDMPVKMQMQAMSFASQALDLFDVFDCKSIAGHIKKEFDERYGSGWQCVV 60

Query: 408 GSNFGCFFTHSQGTFIYFALETLNFLIFKGASS 310
           GSNFGCFFTHS+GTFIYF LETL FLIFKGAS+
Sbjct: 61  GSNFGCFFTHSKGTFIYFQLETLKFLIFKGAST 93