BLASTX nr result

ID: Coptis21_contig00008218 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00008218
         (1613 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002306582.1| predicted protein [Populus trichocarpa] gi|2...   732   0.0  
ref|XP_002285801.1| PREDICTED: endoplasmic reticulum-Golgi inter...   728   0.0  
ref|XP_002513896.1| Endoplasmic reticulum-Golgi intermediate com...   726   0.0  
ref|XP_003544786.1| PREDICTED: endoplasmic reticulum-Golgi inter...   719   0.0  
ref|XP_003542443.1| PREDICTED: endoplasmic reticulum-Golgi inter...   712   0.0  

>ref|XP_002306582.1| predicted protein [Populus trichocarpa] gi|222856031|gb|EEE93578.1|
            predicted protein [Populus trichocarpa]
          Length = 386

 Score =  732 bits (1890), Expect = 0.0
 Identities = 346/386 (89%), Positives = 367/386 (95%)
 Frame = +1

Query: 169  MDNMFSKLRNLDAYPKINEDFYSRTLSGGVITIVSSIVMLLLFISELRLYLHTVTETQLV 348
            M+ + SKLRNLDAYPKINEDFYSRTLSGGVIT+ SS+VM LLF SELRLYLH VTET+LV
Sbjct: 1    MEGLMSKLRNLDAYPKINEDFYSRTLSGGVITLASSVVMFLLFFSELRLYLHAVTETKLV 60

Query: 349  VDTSRGETLRINFDVTFPALPCSILSIDAMDISGEQHLDVRHDIIKKRIDVHGNVIETRQ 528
            VDTSRGETLRINFDVTFPALPCSILS+DAMDISGEQHLDV+HDIIKKR+D HGNVIE RQ
Sbjct: 61   VDTSRGETLRINFDVTFPALPCSILSLDAMDISGEQHLDVKHDIIKKRLDFHGNVIEARQ 120

Query: 529  DGIGGPKIEKPLQRHGGRLEHNETYCGSCYGAEASDEDCCNSCEDVREAYRKKGWGMSNP 708
            DGIG PKIEKPLQRHGGRLEHNETYCGSCYGAEASDEDCCNSCEDVREAYRKKGW ++NP
Sbjct: 121  DGIGAPKIEKPLQRHGGRLEHNETYCGSCYGAEASDEDCCNSCEDVREAYRKKGWAVTNP 180

Query: 709  DLIDQCKREGFLQKIKDEEGEGCNVYGSLEVNKVAGNFHFAPGKSFQQSGVHVHDLLAFQ 888
            DL+DQCKREGFLQKIKDEEGEGCN+YG LEVNKVAGNFHFAPGKSFQQSGVHVHDLLAFQ
Sbjct: 181  DLMDQCKREGFLQKIKDEEGEGCNIYGFLEVNKVAGNFHFAPGKSFQQSGVHVHDLLAFQ 240

Query: 889  KDSFNISHKINRLTFGEYFPGVVNPLDGVKWVQETPHGMYQYFIKVVPTVYTDIRGHTIQ 1068
            KDSFNI+HKINRLTFGEYFPGVVNPLDGV+W QETP GMYQYFIKVVPTVYTD+ GHTIQ
Sbjct: 241  KDSFNITHKINRLTFGEYFPGVVNPLDGVQWTQETPSGMYQYFIKVVPTVYTDVSGHTIQ 300

Query: 1069 TNQFSVTEHFRNAEFGRPQALPGVFFFYDLSPIKVTFAEEHISFLHFLTNVCAIVGGVFT 1248
            +NQFSVTEHFR  + GR Q+LPGVFFFYDLSPIKVTF EEH+SFLHFLTNVCAIVGGVFT
Sbjct: 301  SNQFSVTEHFRGTDIGRLQSLPGVFFFYDLSPIKVTFTEEHVSFLHFLTNVCAIVGGVFT 360

Query: 1249 VSGIVDSFIYHGQKAIKKKMEIGKFS 1326
            VSGI+D+FIYHGQKAIKKKMEIGKFS
Sbjct: 361  VSGILDTFIYHGQKAIKKKMEIGKFS 386


>ref|XP_002285801.1| PREDICTED: endoplasmic reticulum-Golgi intermediate compartment
            protein 3 [Vitis vinifera] gi|302141938|emb|CBI19141.3|
            unnamed protein product [Vitis vinifera]
          Length = 386

 Score =  728 bits (1878), Expect = 0.0
 Identities = 345/386 (89%), Positives = 366/386 (94%)
 Frame = +1

Query: 169  MDNMFSKLRNLDAYPKINEDFYSRTLSGGVITIVSSIVMLLLFISELRLYLHTVTETQLV 348
            MDN+ +KLRNLDAYPKINEDFYSRTLSGGVIT+ SSI MLLLFISELRLYLH VTET+LV
Sbjct: 1    MDNIINKLRNLDAYPKINEDFYSRTLSGGVITLASSIFMLLLFISELRLYLHAVTETKLV 60

Query: 349  VDTSRGETLRINFDVTFPALPCSILSIDAMDISGEQHLDVRHDIIKKRIDVHGNVIETRQ 528
            VDTSRGETLRINFDVTFPALPCSILS+DAMDISGEQHLDVRHDIIKKRID HG+VIE RQ
Sbjct: 61   VDTSRGETLRINFDVTFPALPCSILSLDAMDISGEQHLDVRHDIIKKRIDAHGSVIEARQ 120

Query: 529  DGIGGPKIEKPLQRHGGRLEHNETYCGSCYGAEASDEDCCNSCEDVREAYRKKGWGMSNP 708
            DGIG PKIEKPLQ+HGGRLEHNETYCGSCYGAEASD+DCCN+CE+VREAYRKKGW MSNP
Sbjct: 121  DGIGSPKIEKPLQKHGGRLEHNETYCGSCYGAEASDDDCCNNCEEVREAYRKKGWAMSNP 180

Query: 709  DLIDQCKREGFLQKIKDEEGEGCNVYGSLEVNKVAGNFHFAPGKSFQQSGVHVHDLLAFQ 888
            DLIDQCKREGFLQ+IKDEEGEGCN+YG LEVNKVAGNFHFAPGKSFQQS +HVHDLLAFQ
Sbjct: 181  DLIDQCKREGFLQRIKDEEGEGCNIYGFLEVNKVAGNFHFAPGKSFQQSNIHVHDLLAFQ 240

Query: 889  KDSFNISHKINRLTFGEYFPGVVNPLDGVKWVQETPHGMYQYFIKVVPTVYTDIRGHTIQ 1068
            KDSFNISHKINRL FG+YFPGVVNPLDGV+W+Q TP GMYQYFIKVVPTVYT + GHTI 
Sbjct: 241  KDSFNISHKINRLAFGDYFPGVVNPLDGVQWIQATPSGMYQYFIKVVPTVYTHVSGHTIS 300

Query: 1069 TNQFSVTEHFRNAEFGRPQALPGVFFFYDLSPIKVTFAEEHISFLHFLTNVCAIVGGVFT 1248
            TNQFSVTEHFRNAE GR Q+LPGVFFFYDLSPIKVTF EEH+SFLHFLTNVCAIVGGVFT
Sbjct: 301  TNQFSVTEHFRNAELGRLQSLPGVFFFYDLSPIKVTFTEEHVSFLHFLTNVCAIVGGVFT 360

Query: 1249 VSGIVDSFIYHGQKAIKKKMEIGKFS 1326
            VSGI+DSFIYH QKAIKKK+EIGKFS
Sbjct: 361  VSGILDSFIYHSQKAIKKKIEIGKFS 386


>ref|XP_002513896.1| Endoplasmic reticulum-Golgi intermediate compartment protein,
            putative [Ricinus communis] gi|223546982|gb|EEF48479.1|
            Endoplasmic reticulum-Golgi intermediate compartment
            protein, putative [Ricinus communis]
          Length = 386

 Score =  726 bits (1874), Expect = 0.0
 Identities = 345/386 (89%), Positives = 366/386 (94%)
 Frame = +1

Query: 169  MDNMFSKLRNLDAYPKINEDFYSRTLSGGVITIVSSIVMLLLFISELRLYLHTVTETQLV 348
            M+ + +KLRNLDAYPKINEDFYSRTLSGGVIT+ SSI+MLLLFISELRLY+H VTET+L 
Sbjct: 1    MEGIMNKLRNLDAYPKINEDFYSRTLSGGVITLASSILMLLLFISELRLYIHAVTETKLA 60

Query: 349  VDTSRGETLRINFDVTFPALPCSILSIDAMDISGEQHLDVRHDIIKKRIDVHGNVIETRQ 528
            VDTSRGETLRINFDVTFPALPCSILS+DAMDISGEQHLDV+HDIIKKR+D HGNVIE RQ
Sbjct: 61   VDTSRGETLRINFDVTFPALPCSILSLDAMDISGEQHLDVKHDIIKKRLDSHGNVIEARQ 120

Query: 529  DGIGGPKIEKPLQRHGGRLEHNETYCGSCYGAEASDEDCCNSCEDVREAYRKKGWGMSNP 708
            DGIG PKIE PLQRHGGRLEHNETYCGSCYGAEASDEDCCNSCEDVREAYRKKGW +SNP
Sbjct: 121  DGIGAPKIENPLQRHGGRLEHNETYCGSCYGAEASDEDCCNSCEDVREAYRKKGWALSNP 180

Query: 709  DLIDQCKREGFLQKIKDEEGEGCNVYGSLEVNKVAGNFHFAPGKSFQQSGVHVHDLLAFQ 888
            DLIDQCKREGFLQ+IKDEEGEGCN+YG LEVNKVAGNFHFAPGKSFQQS VHVHDLLAFQ
Sbjct: 181  DLIDQCKREGFLQRIKDEEGEGCNIYGFLEVNKVAGNFHFAPGKSFQQSNVHVHDLLAFQ 240

Query: 889  KDSFNISHKINRLTFGEYFPGVVNPLDGVKWVQETPHGMYQYFIKVVPTVYTDIRGHTIQ 1068
            KDSFNISHKINRL FG+YFPGVVNPLDGV W QETP GMYQYFIKVVPTVYTD+ G+TIQ
Sbjct: 241  KDSFNISHKINRLAFGDYFPGVVNPLDGVHWTQETPSGMYQYFIKVVPTVYTDVSGYTIQ 300

Query: 1069 TNQFSVTEHFRNAEFGRPQALPGVFFFYDLSPIKVTFAEEHISFLHFLTNVCAIVGGVFT 1248
            +NQFSVTEHFR+AE GR Q+LPGVFFFYDLSPIKVTF EEH+SFLHFLTNVCAIVGGVFT
Sbjct: 301  SNQFSVTEHFRSAEAGRLQSLPGVFFFYDLSPIKVTFTEEHVSFLHFLTNVCAIVGGVFT 360

Query: 1249 VSGIVDSFIYHGQKAIKKKMEIGKFS 1326
            VSGI+DSFIYHGQKAIKKKMEIGKFS
Sbjct: 361  VSGILDSFIYHGQKAIKKKMEIGKFS 386


>ref|XP_003544786.1| PREDICTED: endoplasmic reticulum-Golgi intermediate compartment
            protein 3-like [Glycine max]
          Length = 386

 Score =  719 bits (1855), Expect = 0.0
 Identities = 340/386 (88%), Positives = 364/386 (94%)
 Frame = +1

Query: 169  MDNMFSKLRNLDAYPKINEDFYSRTLSGGVITIVSSIVMLLLFISELRLYLHTVTETQLV 348
            MD++ SKLRNLDAYPKINEDFYSRTLSGGVIT+ SSI+MLLLF SELRLYLH VTET+LV
Sbjct: 1    MDSIMSKLRNLDAYPKINEDFYSRTLSGGVITLASSILMLLLFFSELRLYLHAVTETKLV 60

Query: 349  VDTSRGETLRINFDVTFPALPCSILSIDAMDISGEQHLDVRHDIIKKRIDVHGNVIETRQ 528
            VDTSR ETLRINFDVTFPALPCSILS+DAMDISGEQHLDV+HDIIKKR+D HGNVIETRQ
Sbjct: 61   VDTSRAETLRINFDVTFPALPCSILSLDAMDISGEQHLDVKHDIIKKRLDSHGNVIETRQ 120

Query: 529  DGIGGPKIEKPLQRHGGRLEHNETYCGSCYGAEASDEDCCNSCEDVREAYRKKGWGMSNP 708
            +GIG PKIEKPLQRHGGRLEHNETYCGSCYGAE SD+DCCNSCEDVREAYRKKGW +SNP
Sbjct: 121  EGIGAPKIEKPLQRHGGRLEHNETYCGSCYGAEESDDDCCNSCEDVREAYRKKGWALSNP 180

Query: 709  DLIDQCKREGFLQKIKDEEGEGCNVYGSLEVNKVAGNFHFAPGKSFQQSGVHVHDLLAFQ 888
            DLIDQCKREGFLQ+IKDEEGEGCNVYG LEVNKVAGNFHFAPGKSFQQSGVHVHDLLAFQ
Sbjct: 181  DLIDQCKREGFLQRIKDEEGEGCNVYGFLEVNKVAGNFHFAPGKSFQQSGVHVHDLLAFQ 240

Query: 889  KDSFNISHKINRLTFGEYFPGVVNPLDGVKWVQETPHGMYQYFIKVVPTVYTDIRGHTIQ 1068
            KDSFN+SH INRL FGEYFPGVVNPLD V W QETP GMYQYFIKVVPTVYTD+ GHTIQ
Sbjct: 241  KDSFNLSHHINRLAFGEYFPGVVNPLDNVHWTQETPSGMYQYFIKVVPTVYTDVSGHTIQ 300

Query: 1069 TNQFSVTEHFRNAEFGRPQALPGVFFFYDLSPIKVTFAEEHISFLHFLTNVCAIVGGVFT 1248
            +NQFSVTEHFR  + GR Q+LPGVFFFYDLSPIKVTF EE++SFLHFLTNVCAIVGG+FT
Sbjct: 301  SNQFSVTEHFRTGDVGRLQSLPGVFFFYDLSPIKVTFTEENVSFLHFLTNVCAIVGGIFT 360

Query: 1249 VSGIVDSFIYHGQKAIKKKMEIGKFS 1326
            VSGI+DSFIYHGQ+AIKKKME+GKF+
Sbjct: 361  VSGILDSFIYHGQRAIKKKMELGKFN 386


>ref|XP_003542443.1| PREDICTED: endoplasmic reticulum-Golgi intermediate compartment
            protein 3-like [Glycine max]
          Length = 386

 Score =  712 bits (1838), Expect = 0.0
 Identities = 337/386 (87%), Positives = 363/386 (94%)
 Frame = +1

Query: 169  MDNMFSKLRNLDAYPKINEDFYSRTLSGGVITIVSSIVMLLLFISELRLYLHTVTETQLV 348
            M+++ SKLRNLDAYPKINEDFYSRTLSGGVIT+ SSI+MLLLF SELRLYLH VTET+LV
Sbjct: 1    MESIISKLRNLDAYPKINEDFYSRTLSGGVITLASSILMLLLFYSELRLYLHAVTETKLV 60

Query: 349  VDTSRGETLRINFDVTFPALPCSILSIDAMDISGEQHLDVRHDIIKKRIDVHGNVIETRQ 528
            VDTSR ETLRINFDVTFPALPCSILS+DAMDISGEQ LDV+HDIIKKR+D  GNVIETRQ
Sbjct: 61   VDTSRAETLRINFDVTFPALPCSILSLDAMDISGEQRLDVKHDIIKKRLDSRGNVIETRQ 120

Query: 529  DGIGGPKIEKPLQRHGGRLEHNETYCGSCYGAEASDEDCCNSCEDVREAYRKKGWGMSNP 708
            +GIG PKIEKPLQRHGGRLEHNETYCGSCYG+E SD+DCCNSCEDVREAYRKKGW +SNP
Sbjct: 121  EGIGAPKIEKPLQRHGGRLEHNETYCGSCYGSEVSDDDCCNSCEDVREAYRKKGWALSNP 180

Query: 709  DLIDQCKREGFLQKIKDEEGEGCNVYGSLEVNKVAGNFHFAPGKSFQQSGVHVHDLLAFQ 888
            DLIDQCKREGFLQ+IKDEEGEGCNVYG LEVNKVAGNFHFAPGKSFQQSGVHVHDLLAFQ
Sbjct: 181  DLIDQCKREGFLQRIKDEEGEGCNVYGFLEVNKVAGNFHFAPGKSFQQSGVHVHDLLAFQ 240

Query: 889  KDSFNISHKINRLTFGEYFPGVVNPLDGVKWVQETPHGMYQYFIKVVPTVYTDIRGHTIQ 1068
            KDSFN+SH INRLTFGEYFPGVVNPLD V W QETP GMYQYFIKVVPTVYTD+ GHTIQ
Sbjct: 241  KDSFNLSHHINRLTFGEYFPGVVNPLDNVHWTQETPSGMYQYFIKVVPTVYTDVSGHTIQ 300

Query: 1069 TNQFSVTEHFRNAEFGRPQALPGVFFFYDLSPIKVTFAEEHISFLHFLTNVCAIVGGVFT 1248
            +NQFSVTEHFR  + GR Q+LPGVFFFYDLSPIKVTF EE++SFLHFLTNVCAIVGG+FT
Sbjct: 301  SNQFSVTEHFRTGDMGRLQSLPGVFFFYDLSPIKVTFTEENVSFLHFLTNVCAIVGGIFT 360

Query: 1249 VSGIVDSFIYHGQKAIKKKMEIGKFS 1326
            VSGI+DSFIYHGQ+AIKKKME+GKF+
Sbjct: 361  VSGILDSFIYHGQRAIKKKMELGKFN 386


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