BLASTX nr result

ID: Coptis21_contig00008207 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00008207
         (1375 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI33568.3| unnamed protein product [Vitis vinifera]              251   2e-64
ref|XP_002271492.1| PREDICTED: ell-associated factor Eaf isoform...   251   2e-64
ref|XP_002271519.1| PREDICTED: ell-associated factor Eaf isoform...   246   1e-62
ref|XP_003536631.1| PREDICTED: uncharacterized protein LOC100787...   243   1e-61
ref|NP_001242067.1| uncharacterized protein LOC100796208 [Glycin...   241   4e-61

>emb|CBI33568.3| unnamed protein product [Vitis vinifera]
          Length = 372

 Score =  251 bits (642), Expect = 2e-64
 Identities = 156/293 (53%), Positives = 180/293 (61%), Gaps = 2/293 (0%)
 Frame = -1

Query: 1267 NKKEPDTAPPPDHWYNLTLGPSFKD-NSSTKFCTLRYEFKPASIDKTQTGSLHKTKENKV 1091
            NK EP TAP  D WY+LTLG SFKD +SSTKFCTLRYEFKPASIDK Q GSLHK KEN+V
Sbjct: 8    NKDEPSTAPESDRWYDLTLGSSFKDPHSSTKFCTLRYEFKPASIDKNQPGSLHKNKENRV 67

Query: 1090 TVEFQNNQLGKPKLSFEGSSEDYKDNDAVLFFDGETFRLERLHRAVKRLRHVRLPGESXX 911
            TVEF NNQ GKPK++FEGSSEDYK+NDAVLFFDGETFRLERLHRAVKRLRHVRLPGES  
Sbjct: 68   TVEFHNNQPGKPKVTFEGSSEDYKENDAVLFFDGETFRLERLHRAVKRLRHVRLPGESAA 127

Query: 910  XXXXXXXXXXXXXXXXASSGGQGLIEPRSPVHGKGVKSQPFSKTAIHHSVPVEVERIDIG 731
                                    +E  SP  GKG K Q F+K +I H VPVEVERIDIG
Sbjct: 128  AAATTAATTSVVPP----------VESYSPPIGKGAKLQSFNK-SIAHPVPVEVERIDIG 176

Query: 730  ESKSSPGPKSTDKGVGDNSSAPPFTSTESLESKRTEVDINVSML-FXXXXXXXXXXXDTA 554
             S+S  G K+ +  V D   + P  S  S  SK  E++ ++ ++             + A
Sbjct: 177  NSESL-GTKAKNGKVVDYPPSRPNPSVTSPNSKNYELEEHLDIINDDNDNFQTAKKENVA 235

Query: 553  EQENNTGFDINIPNLNXXXXXXXXXXXXXXDXXXXXXXXXXXALRAQVNAEGR 395
            E+E +TG DIN+P  N              D           ALRAQV+AEGR
Sbjct: 236  EREFHTGIDINLPQQN--DIDDEIADVDVSDDEADKGPNAAEALRAQVDAEGR 286


>ref|XP_002271492.1| PREDICTED: ell-associated factor Eaf isoform 1 [Vitis vinifera]
            gi|147820042|emb|CAN62810.1| hypothetical protein
            VITISV_025292 [Vitis vinifera]
          Length = 344

 Score =  251 bits (642), Expect = 2e-64
 Identities = 156/293 (53%), Positives = 180/293 (61%), Gaps = 2/293 (0%)
 Frame = -1

Query: 1267 NKKEPDTAPPPDHWYNLTLGPSFKD-NSSTKFCTLRYEFKPASIDKTQTGSLHKTKENKV 1091
            NK EP TAP  D WY+LTLG SFKD +SSTKFCTLRYEFKPASIDK Q GSLHK KEN+V
Sbjct: 8    NKDEPSTAPESDRWYDLTLGSSFKDPHSSTKFCTLRYEFKPASIDKNQPGSLHKNKENRV 67

Query: 1090 TVEFQNNQLGKPKLSFEGSSEDYKDNDAVLFFDGETFRLERLHRAVKRLRHVRLPGESXX 911
            TVEF NNQ GKPK++FEGSSEDYK+NDAVLFFDGETFRLERLHRAVKRLRHVRLPGES  
Sbjct: 68   TVEFHNNQPGKPKVTFEGSSEDYKENDAVLFFDGETFRLERLHRAVKRLRHVRLPGESAA 127

Query: 910  XXXXXXXXXXXXXXXXASSGGQGLIEPRSPVHGKGVKSQPFSKTAIHHSVPVEVERIDIG 731
                                    +E  SP  GKG K Q F+K +I H VPVEVERIDIG
Sbjct: 128  AAATTAATTSVVPP----------VESYSPPIGKGAKLQSFNK-SIAHPVPVEVERIDIG 176

Query: 730  ESKSSPGPKSTDKGVGDNSSAPPFTSTESLESKRTEVDINVSML-FXXXXXXXXXXXDTA 554
             S+S  G K+ +  V D   + P  S  S  SK  E++ ++ ++             + A
Sbjct: 177  NSESL-GTKAKNGKVVDYPPSRPNPSVTSPNSKNYELEEHLDIINDDNDNFQTAKKENVA 235

Query: 553  EQENNTGFDINIPNLNXXXXXXXXXXXXXXDXXXXXXXXXXXALRAQVNAEGR 395
            E+E +TG DIN+P  N              D           ALRAQV+AEGR
Sbjct: 236  EREFHTGIDINLPQQN--DIDDEIADVDVSDDEADKGPNAAEALRAQVDAEGR 286


>ref|XP_002271519.1| PREDICTED: ell-associated factor Eaf isoform 2 [Vitis vinifera]
          Length = 343

 Score =  246 bits (627), Expect = 1e-62
 Identities = 155/293 (52%), Positives = 180/293 (61%), Gaps = 2/293 (0%)
 Frame = -1

Query: 1267 NKKEPDTAPPPDHWYNLTLGPSFKD-NSSTKFCTLRYEFKPASIDKTQTGSLHKTKENKV 1091
            NK EP TAP  D WY+LTLG SFKD +SSTKFCTLRYEFKPASIDK Q GSLHK KEN+V
Sbjct: 8    NKDEPSTAPESDRWYDLTLGSSFKDPHSSTKFCTLRYEFKPASIDKNQPGSLHKNKENRV 67

Query: 1090 TVEFQNNQLGKPKLSFEGSSEDYKDNDAVLFFDGETFRLERLHRAVKRLRHVRLPGESXX 911
            TVEF NNQ GKPK++FEGSSEDYK+NDAVLFFDGETFRLERLHRAVKRLRHVRLPGES  
Sbjct: 68   TVEFHNNQPGKPKVTFEGSSEDYKENDAVLFFDGETFRLERLHRAVKRLRHVRLPGESAA 127

Query: 910  XXXXXXXXXXXXXXXXASSGGQGLIEPRSPVHGKGVKSQPFSKTAIHHSVPVEVERIDIG 731
                                    +E  SP  GKG K Q F+K +I H VPVEVERIDIG
Sbjct: 128  AAATTAATTSVVPP----------VESYSPPIGKGAKLQSFNK-SIAHPVPVEVERIDIG 176

Query: 730  ESKSSPGPKSTDKGVGDNSSAPPFTSTESLESKRTEVDINVSML-FXXXXXXXXXXXDTA 554
             S+S  G ++ +  V D   + P  S  S  SK  E++ ++ ++             + A
Sbjct: 177  NSESL-GIRNKNV-VVDYPPSRPNPSVTSPNSKNYELEEHLDIINDDNDNFQTAKKENVA 234

Query: 553  EQENNTGFDINIPNLNXXXXXXXXXXXXXXDXXXXXXXXXXXALRAQVNAEGR 395
            E+E +TG DIN+P  N              D           ALRAQV+AEGR
Sbjct: 235  EREFHTGIDINLPQQN--DIDDEIADVDVSDDEADKGPNAAEALRAQVDAEGR 285


>ref|XP_003536631.1| PREDICTED: uncharacterized protein LOC100787712 [Glycine max]
          Length = 318

 Score =  243 bits (619), Expect = 1e-61
 Identities = 131/255 (51%), Positives = 172/255 (67%), Gaps = 1/255 (0%)
 Frame = -1

Query: 1273 NRNKKEPDTAPPPDHWYNLTLGPSFKDNSSTKFCTLRYEFKPASIDKTQTGSLHKTKENK 1094
            N++++EP TAP PD WYNLTLGPSFKD SS K+CTLRYEFKPAS+DKT+ G L KTKEN+
Sbjct: 3    NKSQEEPKTAPEPDRWYNLTLGPSFKDESSNKYCTLRYEFKPASVDKTKPGLLRKTKENR 62

Query: 1093 VTVEFQNNQLGKPKLSFEGSSEDYKDNDAVLFFDGETFRLERLHRAVKRLRHVRLPGESX 914
            V+VEFQNNQ+GKPK++FEG+SE+YK+NDAVLFFDGET RLERLHRAVK+LRH+R+PGES 
Sbjct: 63   VSVEFQNNQIGKPKVTFEGNSEEYKENDAVLFFDGETLRLERLHRAVKQLRHLRMPGES- 121

Query: 913  XXXXXXXXXXXXXXXXXASSGGQGLIEPRSPVHGKGVKSQPFSKTAIHHSVPVEVERIDI 734
                              ++     ++PRS   GK VK  P  +++   +VPVEVERIDI
Sbjct: 122  ----------AGAASTVVAAPSGPALDPRSSPVGKSVKPAPLGRSSF-LAVPVEVERIDI 170

Query: 733  GESKSSPGPKSTDKGVGDNSSAPPF-TSTESLESKRTEVDINVSMLFXXXXXXXXXXXDT 557
            GE +++ G KS  K   D+ +  P  TS ++        DI++  LF             
Sbjct: 171  GEPENT-GIKSGSKMSFDHLNELPINTSPDAKNEVEEHQDIDIHDLF---GSETPEDDHN 226

Query: 556  AEQENNTGFDINIPN 512
             E+++N GFD+N+P+
Sbjct: 227  VEEKDNVGFDMNVPH 241


>ref|NP_001242067.1| uncharacterized protein LOC100796208 [Glycine max]
            gi|255636840|gb|ACU18753.1| unknown [Glycine max]
          Length = 318

 Score =  241 bits (614), Expect = 4e-61
 Identities = 129/255 (50%), Positives = 172/255 (67%), Gaps = 1/255 (0%)
 Frame = -1

Query: 1273 NRNKKEPDTAPPPDHWYNLTLGPSFKDNSSTKFCTLRYEFKPASIDKTQTGSLHKTKENK 1094
            N++++ P TAP PD WYNLTLGPSFKD+SS K+CTLRYEFKPAS+DKT+ G L KTKEN+
Sbjct: 3    NKSQEGPKTAPEPDRWYNLTLGPSFKDDSSNKYCTLRYEFKPASVDKTKPGLLRKTKENR 62

Query: 1093 VTVEFQNNQLGKPKLSFEGSSEDYKDNDAVLFFDGETFRLERLHRAVKRLRHVRLPGESX 914
            V+VEFQNNQ+G+PK++FEG+SE+YK+NDAVLFFDGET RLERLHRAVK+LRH+R+PGES 
Sbjct: 63   VSVEFQNNQIGRPKVTFEGNSEEYKENDAVLFFDGETLRLERLHRAVKQLRHLRMPGES- 121

Query: 913  XXXXXXXXXXXXXXXXXASSGGQGLIEPRSPVHGKGVKSQPFSKTAIHHSVPVEVERIDI 734
                              ++     ++PRS   GK VK  P  +++   +VPVEVERIDI
Sbjct: 122  ----------AGAASTVVAAPSGPALDPRSSPVGKSVKPAPLGRSSF-PAVPVEVERIDI 170

Query: 733  GESKSSPGPKSTDKGVGDNSSAPPF-TSTESLESKRTEVDINVSMLFXXXXXXXXXXXDT 557
            GE +++ G KS  K   D+ +  P  TS ++        DI++  LF             
Sbjct: 171  GEPENT-GIKSGSKRSFDHLNELPINTSPDAKNEVEEHQDIDIHDLF---GSETPEDDHN 226

Query: 556  AEQENNTGFDINIPN 512
             E+++N GFD+N+P+
Sbjct: 227  VEEKDNVGFDVNVPH 241


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