BLASTX nr result

ID: Coptis21_contig00008205 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00008205
         (761 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN83217.1| hypothetical protein VITISV_018000 [Vitis vinife...   115   1e-23
emb|CBI41083.3| unnamed protein product [Vitis vinifera]               91   3e-16
ref|XP_002533037.1| conserved hypothetical protein [Ricinus comm...    89   8e-16
ref|XP_002322512.1| predicted protein [Populus trichocarpa] gi|2...    89   1e-15
ref|XP_002308804.1| predicted protein [Populus trichocarpa] gi|2...    85   2e-14

>emb|CAN83217.1| hypothetical protein VITISV_018000 [Vitis vinifera]
           gi|297737545|emb|CBI26746.3| unnamed protein product
           [Vitis vinifera]
          Length = 124

 Score =  115 bits (287), Expect = 1e-23
 Identities = 66/125 (52%), Positives = 86/125 (68%)
 Frame = +3

Query: 60  QQDGDLIVSHSSIALLQERFKQLERMKEMREQKEVLRLFPVSERTTSPTMHYEPSRRHCN 239
           +Q  D IV HSSIALLQERF+QL+R KEMRE++E+LRLF  S    +PT   EPSR    
Sbjct: 3   RQSSDPIVIHSSIALLQERFRQLQRAKEMREERELLRLFSQSP-GVNPTEFPEPSRSFFQ 61

Query: 240 PELSLSPRPSPQGSLSSRPESHHNKQTDYRDVDTPLLMNLWPKNRALHRTSFTCDNNEVD 419
            EL L  R    GS SS+P S HNK +D + ++TP+L+NLWP  + ++R S   D+++VD
Sbjct: 62  SELILPHRSPLPGSPSSQPNS-HNKHSDLQVIETPILVNLWPSEK-VYRASKNFDDSDVD 119

Query: 420 TSLHL 434
           TSLHL
Sbjct: 120 TSLHL 124


>emb|CBI41083.3| unnamed protein product [Vitis vinifera]
          Length = 629

 Score = 90.9 bits (224), Expect = 3e-16
 Identities = 54/130 (41%), Positives = 78/130 (60%), Gaps = 5/130 (3%)
 Frame = +3

Query: 60  QQDGDLIVSHSSIALLQERFKQLERMKEMREQKEVLRLFPVSERTTSPTMHYEPSRRHCN 239
           ++  D I  HSSIALLQERF+QL+R+KEMRE++E+L      +   SP +HY+ SR   +
Sbjct: 3   REGNDPIAIHSSIALLQERFRQLQRVKEMREERELLMKNTGDQGRFSPAIHYQSSRLSSH 62

Query: 240 PELSLSPRPSPQGSLSSRPESHHNKQTDYRDVDTPLLMNLWPKNRALHRTSF-----TCD 404
           PEL     P P+ +LS RP S   K +++   + PLL NL  ++    R S      +  
Sbjct: 63  PELIFPTPPPPEVTLSLRP-SLQIKHSNFHGDENPLLKNLQRRDELFMRASMNKFHESDS 121

Query: 405 NNEVDTSLHL 434
           +++VDTSLHL
Sbjct: 122 DSDVDTSLHL 131


>ref|XP_002533037.1| conserved hypothetical protein [Ricinus communis]
           gi|223527175|gb|EEF29345.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 124

 Score = 89.4 bits (220), Expect = 8e-16
 Identities = 56/125 (44%), Positives = 78/125 (62%)
 Frame = +3

Query: 60  QQDGDLIVSHSSIALLQERFKQLERMKEMREQKEVLRLFPVSERTTSPTMHYEPSRRHCN 239
           +Q+ D    HSSIALLQERF+QLER KEMR+Q+E+LRLF  +E+   P   +E SR   +
Sbjct: 3   RQNCDPTSIHSSIALLQERFRQLERAKEMRQQRELLRLFSEAEQ-VKPPKAFEQSRPFFH 61

Query: 240 PELSLSPRPSPQGSLSSRPESHHNKQTDYRDVDTPLLMNLWPKNRALHRTSFTCDNNEVD 419
            EL L      Q SL  +P +  N+  + +  +TP  ++LW KN  +H T+   D ++VD
Sbjct: 62  SELVLPLGQPLQDSLYLQP-NMQNRHAELQINETPNSVDLWSKNTVMHITN-NFDESDVD 119

Query: 420 TSLHL 434
           TSLHL
Sbjct: 120 TSLHL 124


>ref|XP_002322512.1| predicted protein [Populus trichocarpa] gi|222867142|gb|EEF04273.1|
           predicted protein [Populus trichocarpa]
          Length = 136

 Score = 88.6 bits (218), Expect = 1e-15
 Identities = 57/133 (42%), Positives = 79/133 (59%), Gaps = 9/133 (6%)
 Frame = +3

Query: 63  QDGDLIVSHSSIALLQERFKQLERMKEMREQKEVLRLFPVSERTTSPTMHYEP--SRRHC 236
           ++ D +V  SSIALLQERF+QL+R+K MRE+KE+ ++   S R  SP+M YEP  SR   
Sbjct: 4   ENNDPVVIQSSIALLQERFRQLQRVKAMREEKELSKVLVESPRQLSPSMQYEPAASRLFF 63

Query: 237 NPELSLSPRP-SPQGSLSSRPESHHNKQTDYRDVDTPLLMNLWP-KNRALHR-----TSF 395
           +PEL L PR   P   LS RP     +   + ++DTP LM+  P K  + H         
Sbjct: 64  HPELILQPRSVPPHICLSLRPNPQSKQAGFWCELDTPALMSSSPTKTLSSHGLLDKFDDS 123

Query: 396 TCDNNEVDTSLHL 434
             D++++DTSLHL
Sbjct: 124 ATDDDDIDTSLHL 136


>ref|XP_002308804.1| predicted protein [Populus trichocarpa] gi|222854780|gb|EEE92327.1|
           predicted protein [Populus trichocarpa]
          Length = 137

 Score = 84.7 bits (208), Expect = 2e-14
 Identities = 61/136 (44%), Positives = 84/136 (61%), Gaps = 11/136 (8%)
 Frame = +3

Query: 60  QQDGDLIVSHSSIALLQERFKQLERMKEMREQKEVLRLFPV-SERTTSPTMHY-EP---S 224
           +++ D IV  SSIALLQERF+QL+R+K MRE+KE+ R   V S + +SPTM Y EP   +
Sbjct: 3   KENTDPIVIQSSIALLQERFRQLQRVKAMREEKELSRNIHVESTKQSSPTMQYHEPAAAN 62

Query: 225 RRHCNPELSLSPRPSPQGSLSSRPESHHNKQTDYRDVDTPLLMNLW-----PKNRALHR- 386
           R   +PEL L PR  P   LS  P +  +KQ  +R  +TP LM+L      PK   L + 
Sbjct: 63  RLFFHPELILQPRSPPHVCLSLWP-NPQSKQAGFRCEETPALMSLSSTKTPPKLGVLDKF 121

Query: 387 TSFTCDNNEVDTSLHL 434
            +   D++++DTSLHL
Sbjct: 122 DASATDDDDIDTSLHL 137


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