BLASTX nr result

ID: Coptis21_contig00008195 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00008195
         (1335 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524431.1| conserved hypothetical protein [Ricinus comm...   271   3e-70
ref|XP_003634156.1| PREDICTED: uncharacterized protein LOC100854...   265   2e-68
ref|XP_002321946.1| predicted protein [Populus trichocarpa] gi|2...   256   1e-65
ref|XP_002872115.1| hypothetical protein ARALYDRAFT_489310 [Arab...   248   3e-63
ref|NP_197834.1| uncharacterized protein [Arabidopsis thaliana] ...   247   6e-63

>ref|XP_002524431.1| conserved hypothetical protein [Ricinus communis]
           gi|223536315|gb|EEF37966.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 278

 Score =  271 bits (693), Expect = 3e-70
 Identities = 136/230 (59%), Positives = 178/230 (77%), Gaps = 2/230 (0%)
 Frame = +1

Query: 274 FLKIPNNFPRCCCRQFLKIPNMPPTKSQFP--TPQSLTNWLKPRLPQDSFSSWGNKPGTK 447
           F+ +P+N      R+FLK+P M  +K+  P  TPQSL++WLKPRLP DSF+SWG KPGTK
Sbjct: 53  FICLPSNR-----RRFLKVPAMSISKNNHPFATPQSLSDWLKPRLPSDSFASWGVKPGTK 107

Query: 448 NIHNLFLEISEGESILTDTTPPIRKLHVITVKIIGKSNSNCVLIEAFQELSDGTRRERFR 627
           N+ NL+LE+SEGE+ L D+TPPIR + V+TV++IG+ N+  VL+E+ QELSDG+ R R R
Sbjct: 108 NVQNLWLELSEGETSLADSTPPIRTVSVVTVRVIGEKNT--VLVESHQELSDGSVRNRCR 165

Query: 628 PLSEKMKPDESVENAVLRAVKEELGSVITSEDDGNVKIVEGSYVEKVEERGSVSYPGLPA 807
           PLSEKMKP+E+ E AV RA+KEELGS++   DD NV+IV+GSY EK+EER S+SYPGLPA
Sbjct: 166 PLSEKMKPNETPEAAVFRAIKEELGSILN--DDANVRIVDGSYKEKIEERNSLSYPGLPA 223

Query: 808 CYVLHCVEACVDGLPSEDFWTEEGNEYGECSDGDVMEKAVFVKKHFWKWV 957
            YVL+ ++  VDGLP+++F TEE  EY +  D    +KAV V+KHFWKWV
Sbjct: 224 RYVLYSMDVIVDGLPNDEFSTEEVEEYSDSEDKRTADKAVSVRKHFWKWV 273


>ref|XP_003634156.1| PREDICTED: uncharacterized protein LOC100854009 [Vitis vinifera]
          Length = 292

 Score =  265 bits (677), Expect = 2e-68
 Identities = 153/268 (57%), Positives = 186/268 (69%), Gaps = 6/268 (2%)
 Frame = +1

Query: 172 HPFNPTSLCLPDXXXXXXXXXXXXXXXXKPHKNLFLKIPN-NFPRCCCRQFLKIPNM--- 339
           H   PTSL  PD                KP + LF KI + +FP+   R+FLK P M   
Sbjct: 29  HLPKPTSL--PDLFFTALSLLFLFPSSPKP-QTLFSKISSLSFPQNP-RRFLKTPTMISP 84

Query: 340 --PPTKSQFPTPQSLTNWLKPRLPQDSFSSWGNKPGTKNIHNLFLEISEGESILTDTTPP 513
             P   +QF +PQSLT+WLK RLP DSF+SWG KPGTKN+HNL+LE+SEGE+ L D+ PP
Sbjct: 85  SNPKPITQFSSPQSLTDWLKHRLPSDSFASWGVKPGTKNVHNLWLELSEGETSLADSIPP 144

Query: 514 IRKLHVITVKIIGKSNSNCVLIEAFQELSDGTRRERFRPLSEKMKPDESVENAVLRAVKE 693
           IR + V+TV+II  S  N +L+E+ QELSDGT RER RPLSEKMKP E++E AV RAVKE
Sbjct: 145 IRTVRVVTVRII--SEDNRILLESHQELSDGTIRERCRPLSEKMKPGETLECAVHRAVKE 202

Query: 694 ELGSVITSEDDGNVKIVEGSYVEKVEERGSVSYPGLPACYVLHCVEACVDGLPSEDFWTE 873
           ELGS+I  + +GNV+IV GSY +KVEER S SYPGLPACYVLH V A VDGLP  +F TE
Sbjct: 203 ELGSII--QGNGNVRIVPGSYEQKVEERVSASYPGLPACYVLHSVNAWVDGLPDGEFCTE 260

Query: 874 EGNEYGECSDGDVMEKAVFVKKHFWKWV 957
           E  EY + +   + E AV VK+H+WKWV
Sbjct: 261 E-EEYRDWNGMGIAEMAVSVKRHYWKWV 287


>ref|XP_002321946.1| predicted protein [Populus trichocarpa]
           gi|224134957|ref|XP_002321947.1| predicted protein
           [Populus trichocarpa] gi|222868942|gb|EEF06073.1|
           predicted protein [Populus trichocarpa]
           gi|222868943|gb|EEF06074.1| predicted protein [Populus
           trichocarpa]
          Length = 216

 Score =  256 bits (653), Expect = 1e-65
 Identities = 126/200 (63%), Positives = 156/200 (78%)
 Frame = +1

Query: 358 FPTPQSLTNWLKPRLPQDSFSSWGNKPGTKNIHNLFLEISEGESILTDTTPPIRKLHVIT 537
           F TPQSL++WLKPRLP DSF+SWG KPGTKNIHNL+LEIS+GE+ L D+TPPIR ++V+T
Sbjct: 13  FSTPQSLSDWLKPRLPSDSFASWGIKPGTKNIHNLWLEISQGETFLADSTPPIRTVNVVT 72

Query: 538 VKIIGKSNSNCVLIEAFQELSDGTRRERFRPLSEKMKPDESVENAVLRAVKEELGSVITS 717
           VKII   N N  LIE+ QELSDG+ R R RPLSEKMKP+ES ++A+ RA+ EELGS++  
Sbjct: 73  VKII---NKNQTLIESHQELSDGSVRNRCRPLSEKMKPNESFKDAIFRAINEELGSILKD 129

Query: 718 EDDGNVKIVEGSYVEKVEERGSVSYPGLPACYVLHCVEACVDGLPSEDFWTEEGNEYGEC 897
            ++ ++ IV GSY EKVEER S+SYPGLPA YVL+  +  V+GLP  +F TEE  EY + 
Sbjct: 130 GNEVSINIVNGSYKEKVEERNSMSYPGLPARYVLYSADVEVNGLPDGEFCTEEAEEYPDS 189

Query: 898 SDGDVMEKAVFVKKHFWKWV 957
            +  V EKAV VKKHFWKWV
Sbjct: 190 EEKRVAEKAVSVKKHFWKWV 209


>ref|XP_002872115.1| hypothetical protein ARALYDRAFT_489310 [Arabidopsis lyrata subsp.
           lyrata] gi|297317952|gb|EFH48374.1| hypothetical protein
           ARALYDRAFT_489310 [Arabidopsis lyrata subsp. lyrata]
          Length = 295

 Score =  248 bits (632), Expect = 3e-63
 Identities = 122/214 (57%), Positives = 164/214 (76%), Gaps = 8/214 (3%)
 Frame = +1

Query: 340 PPTKSQFPTPQSLTNWLKPRLPQDSFSSWGNKPGTKNIHNLFLEISEGESILTDTTPPIR 519
           PP   +F  PQSL++WL+ RLP DSF++WG KPGTKN+HNL+LE+S+GE+ L D+TPP+R
Sbjct: 78  PPPSQRFANPQSLSDWLESRLPSDSFAAWGVKPGTKNVHNLWLELSDGETSLADSTPPVR 137

Query: 520 KLHVITVKIIGKSNSNCVLIEAFQELSDGTRRERFRPLSEKMKPDESVENAVLRAVKEEL 699
            ++V+TV++IGK+    +L+EA QELSDG+ R+RFRPLSEKMKP+ES + AV RA+KEEL
Sbjct: 138 TVNVVTVRVIGKNGR--ILVEAHQELSDGSIRDRFRPLSEKMKPEESPDEAVFRAIKEEL 195

Query: 700 GSVITSEDDG-NVKIVEGSYVEKVEERGSVSYPGLPACYVLHCVEACVDGLPSEDFWTEE 876
           GS+   +D G  ++I+ G+Y  +VEER S+SYPGLPA Y LH V+A V+GLP EDF T+E
Sbjct: 196 GSIFNGDDVGQRIRILPGTYSRRVEERNSLSYPGLPARYALHSVDATVEGLPEEDFCTDE 255

Query: 877 GNEY--GECSDGDVME-----KAVFVKKHFWKWV 957
             EY  G+ +  D +E     KAV VK+H+WKWV
Sbjct: 256 -KEYDGGDSTTEDSVETRAAGKAVTVKRHYWKWV 288


>ref|NP_197834.1| uncharacterized protein [Arabidopsis thaliana]
           gi|9758534|dbj|BAB08929.1| unnamed protein product
           [Arabidopsis thaliana] gi|17065180|gb|AAL32744.1|
           Unknown protein [Arabidopsis thaliana]
           gi|20259932|gb|AAM13313.1| unknown protein [Arabidopsis
           thaliana] gi|332005930|gb|AED93313.1| uncharacterized
           protein [Arabidopsis thaliana]
          Length = 300

 Score =  247 bits (630), Expect = 6e-63
 Identities = 122/217 (56%), Positives = 159/217 (73%), Gaps = 8/217 (3%)
 Frame = +1

Query: 331 PNMPPTKSQFPTPQSLTNWLKPRLPQDSFSSWGNKPGTKNIHNLFLEISEGESILTDTTP 510
           P  PP   +F  PQSL++WL+ RLP DSF++WG KPGTKN+HNL+LE+S+GE+ L D+TP
Sbjct: 79  PPPPPPTQRFANPQSLSDWLESRLPSDSFAAWGVKPGTKNVHNLWLELSDGETSLADSTP 138

Query: 511 PIRKLHVITVKIIGKSNSNCVLIEAFQELSDGTRRERFRPLSEKMKPDESVENAVLRAVK 690
           P+R ++V+TV++IGK+    +L+EA QELSDG+ RERFRPLSEKMKP+ES + AV RA+K
Sbjct: 139 PVRTVNVVTVRVIGKNGR--ILVEAHQELSDGSIRERFRPLSEKMKPEESPDEAVFRAIK 196

Query: 691 EELGSVITSEDDG---NVKIVEGSYVEKVEERGSVSYPGLPACYVLHCVEACVDGLPSED 861
           EELGS+   + D     +KI+ G+Y  +VEER S+SYPGLPA Y LH V A V+GLP +D
Sbjct: 197 EELGSIFNGDGDNIGQRIKILPGTYNRRVEERNSLSYPGLPARYALHSVNATVEGLPEQD 256

Query: 862 FWTEEGNEYGECSDGDVME-----KAVFVKKHFWKWV 957
           F TEE    G  S  D +E      AV VK+H+WKWV
Sbjct: 257 FCTEEKEYEGGDSTKDSVETLAAGNAVTVKRHYWKWV 293


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