BLASTX nr result
ID: Coptis21_contig00008182
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00008182
(1366 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN71047.1| hypothetical protein VITISV_015116 [Vitis vinifera] 438 e-120
ref|XP_002281267.2| PREDICTED: F-box/kelch-repeat protein At2g44... 437 e-120
ref|XP_002297641.1| predicted protein [Populus trichocarpa] gi|2... 426 e-117
ref|XP_002309282.1| f-box family protein [Populus trichocarpa] g... 414 e-113
ref|XP_002304005.1| f-box family protein [Populus trichocarpa] g... 413 e-113
>emb|CAN71047.1| hypothetical protein VITISV_015116 [Vitis vinifera]
Length = 343
Score = 438 bits (1126), Expect = e-120
Identities = 204/339 (60%), Positives = 261/339 (76%)
Frame = +3
Query: 228 ETIPGLPEAIGFECLTRFSYTTHQVASQVCRRWREILESNEFYKQRKQSGFTHKLACLVQ 407
E IPGLPE I EC TR YT+H+VA+QVCRRW E+L+ EFY RKQ+GFTHK ACLVQ
Sbjct: 6 ELIPGLPEEIALECFTRLPYTSHRVAAQVCRRWGELLQGKEFYYXRKQTGFTHKAACLVQ 65
Query: 408 SLPVQPDTKIQKPTAQLSYGITIYDPKNTSWARLDPIPKYPFGLPLFSQLTCVEGKLIVM 587
+LPV ++ +KP SYGI+++D + +W R+ P+PKYP GLPLF Q+T EGKL+VM
Sbjct: 66 ALPVLSESDGRKPVRPPSYGISVFDSVSRTWERIAPVPKYPDGLPLFCQVTSSEGKLVVM 125
Query: 588 GGWNPVSWDPVMDVFVYDFTTQEWRQGKDMPSKRSFFASAALNGQVYIAGGHDENKNALK 767
GGW+P S+DPV DVFVYDFTT+ W+QG+DMPSKRSFFA+ L G++++AGGHD++KNAL
Sbjct: 126 GGWDPESYDPVKDVFVYDFTTRRWKQGRDMPSKRSFFAAGELEGRIFVAGGHDDSKNALS 185
Query: 768 SAWSYNVINDAWTKLTQMSEERDECEGVVIGNEFCVVSGYGTEEQGKFRGSAEFYELETS 947
+AW Y+V D W++LT+MS+ERDEC+GVVIG+EF VVSGYGTE QG F SAE +LET
Sbjct: 186 TAWVYDVRRDEWSELTRMSDERDECQGVVIGSEFWVVSGYGTESQGGFVKSAESLDLETG 245
Query: 948 QWRRVEGVWIEGKCPRCNVGVNKENETLICLAELDSAVRVGVCGVEFGESTLVTGSAYQG 1127
+W RV+ W +CPR VGV K+ + L AE D+AV VG C V+ G+ TL+TGSAYQG
Sbjct: 246 RWSRVDEAWGTNQCPRSCVGVGKDGK-LFSWAESDTAVGVGACAVDLGDWTLLTGSAYQG 304
Query: 1128 ASQEFYMIQMKEGEKYSLNKIEVQNEFSGFVQSGCCIEI 1244
A Q F++++ KEG+ L +IEV + FSGFVQSGCC+EI
Sbjct: 305 APQGFFLVERKEGQNGKLERIEVGDGFSGFVQSGCCVEI 343
>ref|XP_002281267.2| PREDICTED: F-box/kelch-repeat protein At2g44130 [Vitis vinifera]
Length = 355
Score = 437 bits (1125), Expect = e-120
Identities = 204/339 (60%), Positives = 261/339 (76%)
Frame = +3
Query: 228 ETIPGLPEAIGFECLTRFSYTTHQVASQVCRRWREILESNEFYKQRKQSGFTHKLACLVQ 407
E IPGLPE I EC TR YT+H+VA+QVCRRW E+L+ EFY RKQ+GFTHK ACLVQ
Sbjct: 18 ELIPGLPEEIALECFTRLPYTSHRVAAQVCRRWGELLQGKEFYYLRKQTGFTHKAACLVQ 77
Query: 408 SLPVQPDTKIQKPTAQLSYGITIYDPKNTSWARLDPIPKYPFGLPLFSQLTCVEGKLIVM 587
+LPV ++ +KP SYGI+++D + +W R+ P+PKYP GLPLF Q+T EGKL+VM
Sbjct: 78 ALPVLSESDGRKPVRPPSYGISVFDSVSRTWERIAPVPKYPDGLPLFCQVTSSEGKLVVM 137
Query: 588 GGWNPVSWDPVMDVFVYDFTTQEWRQGKDMPSKRSFFASAALNGQVYIAGGHDENKNALK 767
GGW+P S+DPV DVFVYDFTT+ W+QG+DMPSKRSFFA+ L G++++AGGHD++KNAL
Sbjct: 138 GGWDPESYDPVKDVFVYDFTTRRWKQGRDMPSKRSFFAAGELEGRIFVAGGHDDSKNALS 197
Query: 768 SAWSYNVINDAWTKLTQMSEERDECEGVVIGNEFCVVSGYGTEEQGKFRGSAEFYELETS 947
+AW Y+V D W++LT+MS+ERDEC+GVVIG+EF VVSGYGTE QG F SAE +LET
Sbjct: 198 TAWVYDVRRDEWSELTRMSDERDECQGVVIGSEFWVVSGYGTESQGGFVKSAESLDLETG 257
Query: 948 QWRRVEGVWIEGKCPRCNVGVNKENETLICLAELDSAVRVGVCGVEFGESTLVTGSAYQG 1127
+W RV+ W +CPR VGV K+ + L AE D+AV VG C V+ G+ TL+TGSAYQG
Sbjct: 258 RWSRVDEAWGTNQCPRSCVGVGKDGK-LFSWAESDTAVGVGACAVDLGDWTLLTGSAYQG 316
Query: 1128 ASQEFYMIQMKEGEKYSLNKIEVQNEFSGFVQSGCCIEI 1244
A Q F++++ KEG+ L +IEV + FSGFVQSGCC+EI
Sbjct: 317 APQGFFLVERKEGQNGKLERIEVGDGFSGFVQSGCCVEI 355
>ref|XP_002297641.1| predicted protein [Populus trichocarpa] gi|222844899|gb|EEE82446.1|
predicted protein [Populus trichocarpa]
Length = 345
Score = 426 bits (1095), Expect = e-117
Identities = 198/339 (58%), Positives = 253/339 (74%)
Frame = +3
Query: 228 ETIPGLPEAIGFECLTRFSYTTHQVASQVCRRWREILESNEFYKQRKQSGFTHKLACLVQ 407
E IP LP+ +G EC+TR YT H+VASQVC++WRE+LES +FY RK+ G+THK+ACLVQ
Sbjct: 8 EFIPSLPQELGLECMTRLPYTAHRVASQVCKQWRELLESKDFYYHRKKLGYTHKVACLVQ 67
Query: 408 SLPVQPDTKIQKPTAQLSYGITIYDPKNTSWARLDPIPKYPFGLPLFSQLTCVEGKLIVM 587
+ ++ KP S+GIT++D + +W RLDP+PKYP GLPLF QL EGKL+VM
Sbjct: 68 AAHRADVSQGSKPGNSPSFGITVFDSVSQTWQRLDPVPKYPNGLPLFCQLASCEGKLVVM 127
Query: 588 GGWNPVSWDPVMDVFVYDFTTQEWRQGKDMPSKRSFFASAALNGQVYIAGGHDENKNALK 767
GGW+PVS++ V VFVYDFTT++WR+GK+MPSKRSFFA A +G++Y+ GGHDENKNALK
Sbjct: 128 GGWDPVSYEQVSHVFVYDFTTRKWREGKEMPSKRSFFAIGAYSGRIYVVGGHDENKNALK 187
Query: 768 SAWSYNVINDAWTKLTQMSEERDECEGVVIGNEFCVVSGYGTEEQGKFRGSAEFYELETS 947
+ W Y++ + WT+L QMS+ERDECEGVVIG+EF VSGY T+ QG+F SAE YE +
Sbjct: 188 TGWVYDLSKEEWTELNQMSQERDECEGVVIGDEFWAVSGYRTDNQGEFEESAEVYEFRSG 247
Query: 948 QWRRVEGVWIEGKCPRCNVGVNKENETLICLAELDSAVRVGVCGVEFGESTLVTGSAYQG 1127
QWRRV+ WI G+CPR +VG K+ L+ A+LD AVRV V G+ FG +V GS G
Sbjct: 248 QWRRVKEAWIPGRCPRSSVGAGKDGR-LMSWADLDPAVRVAVRGIMFGFRVMVAGSDSPG 306
Query: 1128 ASQEFYMIQMKEGEKYSLNKIEVQNEFSGFVQSGCCIEI 1244
A Q FYM++MK+G+ L KI V EFSGFVQSGCC+EI
Sbjct: 307 APQGFYMVEMKDGQNGQLEKINVPEEFSGFVQSGCCVEI 345
>ref|XP_002309282.1| f-box family protein [Populus trichocarpa]
gi|222855258|gb|EEE92805.1| f-box family protein [Populus
trichocarpa]
Length = 337
Score = 414 bits (1063), Expect = e-113
Identities = 193/339 (56%), Positives = 247/339 (72%)
Frame = +3
Query: 228 ETIPGLPEAIGFECLTRFSYTTHQVASQVCRRWREILESNEFYKQRKQSGFTHKLACLVQ 407
E IP LP+ I ECL R YTTH+VASQVC+RWR +L+S +FY QRKQ+G THK ACL+Q
Sbjct: 3 ELIPSLPDEIALECLFRLHYTTHRVASQVCKRWRPVLQSRDFYYQRKQNGLTHKAACLIQ 62
Query: 408 SLPVQPDTKIQKPTAQLSYGITIYDPKNTSWARLDPIPKYPFGLPLFSQLTCVEGKLIVM 587
++P Q + KP YG++I+D N SW R+DP+P YP GLPLF Q+T EGKL+++
Sbjct: 63 AIPDQNGSSQPKPIGPPKYGVSIFDSVNGSWDRVDPVPAYPDGLPLFCQVTSSEGKLVLL 122
Query: 588 GGWNPVSWDPVMDVFVYDFTTQEWRQGKDMPSKRSFFASAALNGQVYIAGGHDENKNALK 767
GGW+PV ++P+ VFVY+FTT++WR+GKDMP RSFFA LNG++ IAGGHDENKNALK
Sbjct: 123 GGWDPVKYEPLSQVFVYEFTTRQWRRGKDMPENRSFFAVGELNGRIIIAGGHDENKNALK 182
Query: 768 SAWSYNVINDAWTKLTQMSEERDECEGVVIGNEFCVVSGYGTEEQGKFRGSAEFYELETS 947
+AW Y+VI D W +L QMS+ERDECEGVVIG+EF VVSGY T+ QG F GSAE EL S
Sbjct: 183 TAWVYDVIQDEWAELPQMSQERDECEGVVIGSEFWVVSGYRTDSQGGFEGSAESIELGAS 242
Query: 948 QWRRVEGVWIEGKCPRCNVGVNKENETLICLAELDSAVRVGVCGVEFGESTLVTGSAYQG 1127
+W+RVE W +CPR ++GV + E L AE DSA++VG V GE T V+GSA++G
Sbjct: 243 KWKRVEDAWKASQCPRSSLGVGSD-EKLFSWAESDSALKVGASSVHLGEKTFVSGSAHEG 301
Query: 1128 ASQEFYMIQMKEGEKYSLNKIEVQNEFSGFVQSGCCIEI 1244
Q F+++ +G+ K+ V EF GFVQSGCC+EI
Sbjct: 302 GPQGFFLV---DGQNGKWEKLNVTGEFCGFVQSGCCVEI 337
>ref|XP_002304005.1| f-box family protein [Populus trichocarpa]
gi|222841437|gb|EEE78984.1| f-box family protein [Populus
trichocarpa]
Length = 345
Score = 413 bits (1061), Expect = e-113
Identities = 190/339 (56%), Positives = 251/339 (74%)
Frame = +3
Query: 228 ETIPGLPEAIGFECLTRFSYTTHQVASQVCRRWREILESNEFYKQRKQSGFTHKLACLVQ 407
E IP LP+ +G EC+TR YT H+VASQVC++W ++LES +FY RK+ G+THK+ACLVQ
Sbjct: 8 ELIPSLPQELGLECMTRLPYTAHRVASQVCKQWCDLLESKDFYYHRKKLGYTHKVACLVQ 67
Query: 408 SLPVQPDTKIQKPTAQLSYGITIYDPKNTSWARLDPIPKYPFGLPLFSQLTCVEGKLIVM 587
++ + K +GI+++D + +W RLDP+P YP LPLF QL EGKL+VM
Sbjct: 68 AVHGADVLQGSKQGNSPCFGISVFDSASQTWERLDPVPNYPIELPLFCQLASCEGKLVVM 127
Query: 588 GGWNPVSWDPVMDVFVYDFTTQEWRQGKDMPSKRSFFASAALNGQVYIAGGHDENKNALK 767
GGW+PVS++ V VFVYDFTT++WR+GK+MPSKRSFFA + +G+VY+ GGHDENKNAL+
Sbjct: 128 GGWDPVSYEQVSHVFVYDFTTRKWREGKEMPSKRSFFAIGSYSGRVYVVGGHDENKNALR 187
Query: 768 SAWSYNVINDAWTKLTQMSEERDECEGVVIGNEFCVVSGYGTEEQGKFRGSAEFYELETS 947
+ W Y++ D WT+L QMS+ERDECEGVVIG+EF VVSGYGT+ QG F G+AE YE +
Sbjct: 188 TGWVYDLSKDEWTELAQMSQERDECEGVVIGDEFWVVSGYGTDNQGAFEGNAEVYEFGSG 247
Query: 948 QWRRVEGVWIEGKCPRCNVGVNKENETLICLAELDSAVRVGVCGVEFGESTLVTGSAYQG 1127
QWR+V+ WI G+CPR VGV K+ L+ A+LD VR GV G+ G ++TG QG
Sbjct: 248 QWRQVKKAWIPGRCPRSCVGVGKDGR-LMSWADLDPMVRAGVRGIPLGSRVMLTGLDNQG 306
Query: 1128 ASQEFYMIQMKEGEKYSLNKIEVQNEFSGFVQSGCCIEI 1244
+ +EFY+I+MK+G+ L KI V +EFSGFVQSGCC+EI
Sbjct: 307 SPEEFYLIEMKDGQNGKLEKIIVPDEFSGFVQSGCCVEI 345