BLASTX nr result
ID: Coptis21_contig00008164
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00008164 (912 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_001051892.1| Os03g0848300 [Oryza sativa Japonica Group] g... 320 4e-85 ref|XP_003562343.1| PREDICTED: actin-related protein 2/3 complex... 320 4e-85 ref|NP_001152567.1| LOC100286207 [Zea mays] gi|195657591|gb|ACG4... 318 8e-85 ref|XP_002466102.1| hypothetical protein SORBIDRAFT_01g001300 [S... 318 1e-84 ref|XP_002273132.1| PREDICTED: actin-related protein 2/3 complex... 318 1e-84 >ref|NP_001051892.1| Os03g0848300 [Oryza sativa Japonica Group] gi|28269392|gb|AAO37935.1| putative actin-related complex protein [Oryza sativa Japonica Group] gi|108712098|gb|ABF99893.1| Actin-related protein 2/3 complex subunit 4, putative, expressed [Oryza sativa Japonica Group] gi|113550363|dbj|BAF13806.1| Os03g0848300 [Oryza sativa Japonica Group] gi|125546442|gb|EAY92581.1| hypothetical protein OsI_14322 [Oryza sativa Indica Group] gi|125588638|gb|EAZ29302.1| hypothetical protein OsJ_13363 [Oryza sativa Japonica Group] gi|149390857|gb|ABR25446.1| actin-related protein 2/3 complex subunit 4 [Oryza sativa Indica Group] Length = 169 Score = 320 bits (819), Expect = 4e-85 Identities = 157/169 (92%), Positives = 165/169 (97%) Frame = +3 Query: 294 MANTQRSYLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSPELLLNPVLICRNEAEK 473 MANT R YLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSPELLLNPVLICRNEAEK Sbjct: 1 MANTLRLYLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSPELLLNPVLICRNEAEK 60 Query: 474 CLIETSINSLRISIKVKQTNELENILTKRFLRFLSMRAEAFQVLRRKPVQGYDISFLVTN 653 CLIETSINS+RIS+KVKQ +ELENIL K+FLRFLSMRAEAFQVLRRKPVQGYDISFL+TN Sbjct: 61 CLIETSINSIRISMKVKQADELENILAKKFLRFLSMRAEAFQVLRRKPVQGYDISFLITN 120 Query: 654 YHCEDMHKHKLIDFIVQFMEDIDKEINELKLSVNTRGKLVATEFLKQFL 800 YHCEDMHKHKLIDFIVQFMEDIDKEI+ELKLSVNTRG+LVATEFLKQF+ Sbjct: 121 YHCEDMHKHKLIDFIVQFMEDIDKEISELKLSVNTRGRLVATEFLKQFI 169 >ref|XP_003562343.1| PREDICTED: actin-related protein 2/3 complex subunit 4-like [Brachypodium distachyon] Length = 169 Score = 320 bits (819), Expect = 4e-85 Identities = 156/169 (92%), Positives = 165/169 (97%) Frame = +3 Query: 294 MANTQRSYLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSPELLLNPVLICRNEAEK 473 MANT R YLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSPELLLNPVLICRNEAEK Sbjct: 1 MANTLRLYLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSPELLLNPVLICRNEAEK 60 Query: 474 CLIETSINSLRISIKVKQTNELENILTKRFLRFLSMRAEAFQVLRRKPVQGYDISFLVTN 653 CL+ETSINS+RIS+KVKQ +ELENIL K+FLRFLSMRAEAFQVLRRKPVQGYDISFL+TN Sbjct: 61 CLVETSINSIRISLKVKQADELENILAKKFLRFLSMRAEAFQVLRRKPVQGYDISFLITN 120 Query: 654 YHCEDMHKHKLIDFIVQFMEDIDKEINELKLSVNTRGKLVATEFLKQFL 800 YHCEDMHKHKLIDFIVQFMEDIDKEI+ELKLSVNTRG+LVATEFLKQF+ Sbjct: 121 YHCEDMHKHKLIDFIVQFMEDIDKEISELKLSVNTRGRLVATEFLKQFI 169 >ref|NP_001152567.1| LOC100286207 [Zea mays] gi|195657591|gb|ACG48263.1| actin-related protein 2/3 complex subunit 4 [Zea mays] gi|413932437|gb|AFW66988.1| actin protein 2/3 complex subunit 4 [Zea mays] gi|413936402|gb|AFW70953.1| actin protein 2/3 complex subunit 4 [Zea mays] Length = 173 Score = 318 bits (816), Expect = 8e-85 Identities = 157/168 (93%), Positives = 164/168 (97%) Frame = +3 Query: 297 ANTQRSYLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSPELLLNPVLICRNEAEKC 476 ANT R YLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSPELLLNPVLICRNEAEKC Sbjct: 6 ANTLRLYLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSPELLLNPVLICRNEAEKC 65 Query: 477 LIETSINSLRISIKVKQTNELENILTKRFLRFLSMRAEAFQVLRRKPVQGYDISFLVTNY 656 LIETSINS+RIS+KVKQ +ELENIL K+FLRFLSMRAEAFQVLRRKPVQGYDISFL+TNY Sbjct: 66 LIETSINSIRISMKVKQADELENILAKKFLRFLSMRAEAFQVLRRKPVQGYDISFLITNY 125 Query: 657 HCEDMHKHKLIDFIVQFMEDIDKEINELKLSVNTRGKLVATEFLKQFL 800 HCEDMHKHKLIDFIVQFMEDIDKEI+ELKLSVNTRG+LVATEFLKQFL Sbjct: 126 HCEDMHKHKLIDFIVQFMEDIDKEISELKLSVNTRGRLVATEFLKQFL 173 >ref|XP_002466102.1| hypothetical protein SORBIDRAFT_01g001300 [Sorghum bicolor] gi|241919956|gb|EER93100.1| hypothetical protein SORBIDRAFT_01g001300 [Sorghum bicolor] Length = 171 Score = 318 bits (815), Expect = 1e-84 Identities = 156/171 (91%), Positives = 165/171 (96%) Frame = +3 Query: 288 LKMANTQRSYLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSPELLLNPVLICRNEA 467 + ANT R YLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSPELLLNPVLICRNEA Sbjct: 1 MSTANTLRLYLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSPELLLNPVLICRNEA 60 Query: 468 EKCLIETSINSLRISIKVKQTNELENILTKRFLRFLSMRAEAFQVLRRKPVQGYDISFLV 647 EKCLIETSINS+RIS+KVKQ +ELENIL K+FLRFLSMRAEAFQVLRRKPVQGYDISFL+ Sbjct: 61 EKCLIETSINSIRISMKVKQADELENILAKKFLRFLSMRAEAFQVLRRKPVQGYDISFLI 120 Query: 648 TNYHCEDMHKHKLIDFIVQFMEDIDKEINELKLSVNTRGKLVATEFLKQFL 800 TNYHCEDMHKHKLIDFIVQFMEDIDKEI+ELKLSVNTRG+LVATEFLKQF+ Sbjct: 121 TNYHCEDMHKHKLIDFIVQFMEDIDKEISELKLSVNTRGRLVATEFLKQFI 171 >ref|XP_002273132.1| PREDICTED: actin-related protein 2/3 complex subunit 4-like [Vitis vinifera] Length = 169 Score = 318 bits (814), Expect = 1e-84 Identities = 156/169 (92%), Positives = 164/169 (97%) Frame = +3 Query: 294 MANTQRSYLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSPELLLNPVLICRNEAEK 473 MANT R Y TCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSPE+LLNPVLICRNEAEK Sbjct: 1 MANTSRLYFTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSPEVLLNPVLICRNEAEK 60 Query: 474 CLIETSINSLRISIKVKQTNELENILTKRFLRFLSMRAEAFQVLRRKPVQGYDISFLVTN 653 CLIETSINSLRIS+KVKQ +ELENILTK+FLRFLSMRAEAFQVLRRKPVQGYDISFL+TN Sbjct: 61 CLIETSINSLRISLKVKQADELENILTKKFLRFLSMRAEAFQVLRRKPVQGYDISFLITN 120 Query: 654 YHCEDMHKHKLIDFIVQFMEDIDKEINELKLSVNTRGKLVATEFLKQFL 800 YHCEDM KHKLIDFIVQFMEDIDKEI+ELKLSVNTRG+LVATEFLKQF+ Sbjct: 121 YHCEDMQKHKLIDFIVQFMEDIDKEISELKLSVNTRGRLVATEFLKQFI 169