BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00008152
         (860 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276647.1| PREDICTED: chlorophyll a-b binding protein o...   416   e-114
ref|XP_004145567.1| PREDICTED: chlorophyll a-b binding protein o...   412   e-113
ref|XP_002510744.1| chlorophyll A/B binding protein, putative [R...   412   e-113
ref|XP_004169873.1| PREDICTED: chlorophyll a-b binding protein o...   410   e-112
ref|XP_002307004.1| light-harvesting complex II protein Lhcb7 [P...   409   e-112

>ref|XP_002276647.1| PREDICTED: chlorophyll a-b binding protein of LHCII type I,
           chloroplastic [Vitis vinifera]
           gi|297745621|emb|CBI40786.3| unnamed protein product
           [Vitis vinifera]
          Length = 331

 Score =  416 bits (1068), Expect = e-114
 Identities = 189/226 (83%), Positives = 208/226 (92%)
 Frame = -1

Query: 860 QKAREYSSWYGDQRPRWLGPIPYDYPAYLTGELPGDYGFDVLGLSQDPVAFHKYFNFEIL 681
           +KA+  S WYG++RPRWLGPIPYDYPAYLTGELPGDYGFD+ GL +DPVAF KYFNFEIL
Sbjct: 101 EKAKNESLWYGEERPRWLGPIPYDYPAYLTGELPGDYGFDIAGLGKDPVAFQKYFNFEIL 160

Query: 680 HARWAMLASLGALVPELLDLSGVVHFIEPVWWRVGYAKLKGDTLDYLGIPGLHIAGSQGV 501
           HARWAMLA+LGAL+PELLDL G  HF+EPVWWRVGY+KLKGDTLDYLGIPG H AGSQGV
Sbjct: 161 HARWAMLAALGALLPELLDLLGAFHFVEPVWWRVGYSKLKGDTLDYLGIPGFHFAGSQGV 220

Query: 500 IVIAVCQALLMVGPEYARYCGIEALEPLGIYLPGDLNYPGGILFDPLGLSKDPVALEELK 321
           IVIA+CQALLMVGPEYARYCGIEALEPLGIYLPGD+NYPGG LFDPL LSKDPVA EELK
Sbjct: 221 IVIAICQALLMVGPEYARYCGIEALEPLGIYLPGDINYPGGALFDPLNLSKDPVAFEELK 280

Query: 320 VKEIKNGRLAMIAWLGFSLQAAITGKGPILNLLEHISDPFHKNVLS 183
           VKEIKNGRLAM+AWLGF +QAA TGKGP+ NLL+H++DPFH N+LS
Sbjct: 281 VKEIKNGRLAMVAWLGFYIQAAATGKGPVQNLLDHLADPFHNNLLS 326


>ref|XP_004145567.1| PREDICTED: chlorophyll a-b binding protein of LHCII type I,
           chloroplastic-like [Cucumis sativus]
          Length = 338

 Score =  412 bits (1059), Expect = e-113
 Identities = 186/226 (82%), Positives = 209/226 (92%)
 Frame = -1

Query: 860 QKAREYSSWYGDQRPRWLGPIPYDYPAYLTGELPGDYGFDVLGLSQDPVAFHKYFNFEIL 681
           ++AR+ SSWYG++RPRWLGP+PYDYP YLTGELPGDYGFD+ GLS+DPVAF K+FNFEIL
Sbjct: 105 EEARKDSSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKFFNFEIL 164

Query: 680 HARWAMLASLGALVPELLDLSGVVHFIEPVWWRVGYAKLKGDTLDYLGIPGLHIAGSQGV 501
           HARWAMLASLGALVPE+LD+ G  HF EP+WWRVGY+KLKGDTLDYLGIPGLH+AGSQGV
Sbjct: 165 HARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGV 224

Query: 500 IVIAVCQALLMVGPEYARYCGIEALEPLGIYLPGDLNYPGGILFDPLGLSKDPVALEELK 321
           IVIA+CQA+LMVGPEYARYCGIEALEPLGIYLPGD+NYPGG+LFDPL LSKD  A EELK
Sbjct: 225 IVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELK 284

Query: 320 VKEIKNGRLAMIAWLGFSLQAAITGKGPILNLLEHISDPFHKNVLS 183
           VKEIKNGRLAM+AWLGF  QAA+TGKGP+ NLL+HI+DPFH N LS
Sbjct: 285 VKEIKNGRLAMVAWLGFYSQAALTGKGPVQNLLDHIADPFHNNFLS 330


>ref|XP_002510744.1| chlorophyll A/B binding protein, putative [Ricinus communis]
           gi|223551445|gb|EEF52931.1| chlorophyll A/B binding
           protein, putative [Ricinus communis]
          Length = 329

 Score =  412 bits (1059), Expect = e-113
 Identities = 191/224 (85%), Positives = 207/224 (92%)
 Frame = -1

Query: 857 KAREYSSWYGDQRPRWLGPIPYDYPAYLTGELPGDYGFDVLGLSQDPVAFHKYFNFEILH 678
           KAR+ S WYG++RPRWLGPIPYDYPAYLTGELPGDYGFDV GLS+D VAF +YFNFEILH
Sbjct: 100 KARKESLWYGEERPRWLGPIPYDYPAYLTGELPGDYGFDVAGLSKDSVAFQRYFNFEILH 159

Query: 677 ARWAMLASLGALVPELLDLSGVVHFIEPVWWRVGYAKLKGDTLDYLGIPGLHIAGSQGVI 498
           ARWAMLA+LGAL PE+LDLSG  HFIEPVWWRVGY+KLKGDTLDYLGIPGLH AGSQGV+
Sbjct: 160 ARWAMLAALGALAPEVLDLSGAFHFIEPVWWRVGYSKLKGDTLDYLGIPGLHFAGSQGVL 219

Query: 497 VIAVCQALLMVGPEYARYCGIEALEPLGIYLPGDLNYPGGILFDPLGLSKDPVALEELKV 318
           VIA+CQALLMVGPEYARYCGIEALEPLGIYLPGD+NYPGG LFDPL LS D VALEELKV
Sbjct: 220 VIAICQALLMVGPEYARYCGIEALEPLGIYLPGDINYPGGPLFDPLNLSSDAVALEELKV 279

Query: 317 KEIKNGRLAMIAWLGFSLQAAITGKGPILNLLEHISDPFHKNVL 186
           KEIKNGRLAM+AWLGF  QAA+TGKGP+ NL+EHISDPFH N+L
Sbjct: 280 KEIKNGRLAMVAWLGFYAQAALTGKGPVQNLVEHISDPFHNNLL 323


>ref|XP_004169873.1| PREDICTED: chlorophyll a-b binding protein of LHCII type I,
           chloroplastic-like [Cucumis sativus]
          Length = 338

 Score =  410 bits (1055), Expect = e-112
 Identities = 186/226 (82%), Positives = 208/226 (92%)
 Frame = -1

Query: 860 QKAREYSSWYGDQRPRWLGPIPYDYPAYLTGELPGDYGFDVLGLSQDPVAFHKYFNFEIL 681
           ++AR+ SSWYG++RPRWLGP+PYDYP YLTGELPGDYGFD+ GLS+DPVAF K+FNFEIL
Sbjct: 105 EEARKDSSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKFFNFEIL 164

Query: 680 HARWAMLASLGALVPELLDLSGVVHFIEPVWWRVGYAKLKGDTLDYLGIPGLHIAGSQGV 501
           HARWAMLASLGALVPE+LD+ G  HF EP+WWRVGY+KLKGDTLDYLGIPGLH+AGSQGV
Sbjct: 165 HARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGV 224

Query: 500 IVIAVCQALLMVGPEYARYCGIEALEPLGIYLPGDLNYPGGILFDPLGLSKDPVALEELK 321
           IVIA+CQA+LMVGPEYARYCGIEALEPLGIYLPGD+NYPGG+LFDPL LSKD  A EELK
Sbjct: 225 IVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAEAFEELK 284

Query: 320 VKEIKNGRLAMIAWLGFSLQAAITGKGPILNLLEHISDPFHKNVLS 183
           VKEIKNGRLAM+AWLGF  QAA+TGKGP+ NLL HI+DPFH N LS
Sbjct: 285 VKEIKNGRLAMVAWLGFYSQAALTGKGPVQNLLNHIADPFHNNFLS 330


>ref|XP_002307004.1| light-harvesting complex II protein Lhcb7 [Populus trichocarpa]
           gi|222856453|gb|EEE94000.1| light-harvesting complex II
           protein Lhcb7 [Populus trichocarpa]
          Length = 338

 Score =  409 bits (1050), Expect = e-112
 Identities = 186/226 (82%), Positives = 207/226 (91%)
 Frame = -1

Query: 860 QKAREYSSWYGDQRPRWLGPIPYDYPAYLTGELPGDYGFDVLGLSQDPVAFHKYFNFEIL 681
           QKAR+ S WYG++RPRWLGPI Y YP YL+GELPGDYGFDV GL++DPVAF +YFNFEIL
Sbjct: 108 QKARKESFWYGEERPRWLGPISYQYPTYLSGELPGDYGFDVAGLAEDPVAFQRYFNFEIL 167

Query: 680 HARWAMLASLGALVPELLDLSGVVHFIEPVWWRVGYAKLKGDTLDYLGIPGLHIAGSQGV 501
           HARWAMLA+LGAL+PE+LDLSG  HFIEPVWWRVGY+KLKGDTLDYLGIPGLH AG QGV
Sbjct: 168 HARWAMLAALGALIPEVLDLSGAFHFIEPVWWRVGYSKLKGDTLDYLGIPGLHFAGGQGV 227

Query: 500 IVIAVCQALLMVGPEYARYCGIEALEPLGIYLPGDLNYPGGILFDPLGLSKDPVALEELK 321
           +VIA CQA+LMVGPEYARYCGIEALEPLGIYLPGD+NYPGGILFDPL LSKDPV+ EELK
Sbjct: 228 LVIAFCQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGILFDPLNLSKDPVSFEELK 287

Query: 320 VKEIKNGRLAMIAWLGFSLQAAITGKGPILNLLEHISDPFHKNVLS 183
           VKEIKNGRLAM+AWLGF +QAA+TGKGP+ NL+EHISDP H N+ S
Sbjct: 288 VKEIKNGRLAMVAWLGFYIQAALTGKGPVENLVEHISDPLHNNLFS 333