BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00008140
         (1586 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI31214.3| unnamed protein product [Vitis vinifera]              322   2e-85
ref|XP_002269372.2| PREDICTED: transcription factor IIIB 90 kDa ...   293   9e-77
gb|AFW78953.1| hypothetical protein ZEAMMB73_136276 [Zea mays]        265   3e-68
ref|NP_001141990.1| uncharacterized protein LOC100274140 [Zea ma...   265   3e-68
ref|XP_003578728.1| PREDICTED: transcription factor IIIB 60 kDa ...   254   4e-65

>emb|CBI31214.3| unnamed protein product [Vitis vinifera]
          Length = 622

 Score =  322 bits (824), Expect = 2e-85
 Identities = 192/423 (45%), Positives = 248/423 (58%), Gaps = 17/423 (4%)
 Frame = +2

Query: 95   VERTARRILASMKRDWMQTGRKPSGLCGAALYIAAHSFGLECSKSDVESIVHVCEATLTK 274
            V +TA RI+ASMKRDW+QTGRKPSGLCGAALYI+A S+GL+CSK+D+  IVH+CEATLTK
Sbjct: 194  VSKTALRIIASMKRDWLQTGRKPSGLCGAALYISALSYGLKCSKTDIVKIVHICEATLTK 253

Query: 275  RLIEFENTESGNLTIEEFNLKADELEKEPRLIMSSE-------ARELLCKHNESETPHFA 433
            RLIEFENTESG+LTIEEFN+KA+ELEKE      S          ELLC+H  S  P FA
Sbjct: 254  RLIEFENTESGSLTIEEFNMKAEELEKEYSSTKQSNIGSTVPGKGELLCEHKGSGKPPFA 313

Query: 434  NGLCKECYDEFVEFSGGLQGGSDPPAFQLAERERLAKASAEKKKDSNLCEKEVEEVDPFS 613
            +GLC+ CY EF++ SGGL+GGS+PPAFQ AER+R+AKA+AE+  DSN    +++     S
Sbjct: 314  HGLCEICYGEFIKLSGGLEGGSEPPAFQRAERDRMAKAAAEENADSN----QIQLDKGSS 369

Query: 614  QPNPNVNVEKKLDSQRSEGVVNEHQTVEEGVCGQSIGHEDID-NTGDESESFSDIDDVEV 790
             P+   N   KL   +S G  ++  +++EG      G +D + N GDESES SDIDDVEV
Sbjct: 370  SPDVCGNESSKLAEPKSIGASDKQASIDEGAPSDLHGADDENANAGDESESLSDIDDVEV 429

Query: 791  NGYLHDEEEKRLKTKIWESLNWEYL----XXXXXXXXXXXXXXXXFHNWSEGSXXXXXXX 958
            +GYLH+E+EK+ K  IWE++N EYL                    F +  EG        
Sbjct: 430  DGYLHNEKEKQFKKIIWEAMNKEYLEEQAAKEAAAAAAKEAYEASFKDNPEGLKAAQELA 489

Query: 959  XXXXXXXXNSKKEKRQXXXXXXXXXXXXXXXXXXTRQMLTKKGMS--FNFDVLNKIFED- 1129
                     S+KE++Q                  TRQMLTKK +S   N+DVL K+F+D 
Sbjct: 490  AATAAAVAKSRKERQQKRAAEAKNTVPAQTAAEATRQMLTKKRLSSKINYDVLEKLFDDS 549

Query: 1130 --PPAPKKPRTELDSKDNANGQQNVKXXXXXXXXXXXXXXXXXXXXXFGDDYSTGDMYGD 1303
                 PKK RTE  +++N +                           FG +  TG +YG+
Sbjct: 550  VPSENPKKIRTESQTENNDH------KAPISNKKLEPEEDDLAPEDEFGYEGDTGGLYGN 603

Query: 1304 DLY 1312
            DLY
Sbjct: 604  DLY 606


>ref|XP_002269372.2| PREDICTED: transcription factor IIIB 90 kDa subunit-like [Vitis
           vinifera]
          Length = 529

 Score =  293 bits (750), Expect = 9e-77
 Identities = 153/265 (57%), Positives = 194/265 (73%), Gaps = 8/265 (3%)
 Frame = +2

Query: 95  VERTARRILASMKRDWMQTGRKPSGLCGAALYIAAHSFGLECSKSDVESIVHVCEATLTK 274
           V +TA RI+ASMKRDW+QTGRKPSGLCGAALYI+A S+GL+CSK+D+  IVH+CEATLTK
Sbjct: 194 VSKTALRIIASMKRDWLQTGRKPSGLCGAALYISALSYGLKCSKTDIVKIVHICEATLTK 253

Query: 275 RLIEFENTESGNLTIEEFNLKADELEKEPRLIMSSE-------ARELLCKHNESETPHFA 433
           RLIEFENTESG+LTIEEFN+KA+ELEKE      S          ELLC+H  S  P FA
Sbjct: 254 RLIEFENTESGSLTIEEFNMKAEELEKEYSSTKQSNIGSTVPGKGELLCEHKGSGKPPFA 313

Query: 434 NGLCKECYDEFVEFSGGLQGGSDPPAFQLAERERLAKASAEKKKDSNLCEKEVEEVDPFS 613
           +GLC+ CY EF++ SGGL+GGS+PPAFQ AER+R+AKA+AE+  DSN    +++     S
Sbjct: 314 HGLCEICYGEFIKLSGGLEGGSEPPAFQRAERDRMAKAAAEENADSN----QIQLDKGSS 369

Query: 614 QPNPNVNVEKKLDSQRSEGVVNEHQTVEEGVCGQSIGHEDID-NTGDESESFSDIDDVEV 790
            P+   N   KL   +S G  ++  +++EG      G +D + N GDESES SDIDDVEV
Sbjct: 370 SPDVCGNESSKLAEPKSIGASDKQASIDEGAPSDLHGADDENANAGDESESLSDIDDVEV 429

Query: 791 NGYLHDEEEKRLKTKIWESLNWEYL 865
           +GYLH+E+EK+ K  IWE++N EYL
Sbjct: 430 DGYLHNEKEKQFKKIIWEAMNKEYL 454


>gb|AFW78953.1| hypothetical protein ZEAMMB73_136276 [Zea mays]
          Length = 515

 Score =  265 bits (677), Expect = 3e-68
 Identities = 144/276 (52%), Positives = 186/276 (67%), Gaps = 8/276 (2%)
 Frame = +2

Query: 62  LLGSKTRLFNDVERTARRILASMKRDWMQTGRKPSGLCGAALYIAAHSFGLECSKSDVES 241
           LLG +    NDV  TA RI+ASMKRDWMQTGRKPSGLCGAALYIAA S G   +K+D+ S
Sbjct: 122 LLGRRN---NDVSDTALRIVASMKRDWMQTGRKPSGLCGAALYIAALSHGCNYTKADIVS 178

Query: 242 IVHVCEATLTKRLIEFENTESGNLTIEEFNLKADELEKEPRLIMSSEARELLCKHNESET 421
           +VHVCEATLTKRLIEFENT+SG+LTIEEF   ADE  +EP    S ++ E+LCKH +   
Sbjct: 179 VVHVCEATLTKRLIEFENTDSGSLTIEEFLATADESNEEPVSKHSPKSGEILCKHKDKGF 238

Query: 422 PHFANGLCKECYDEFVEFSGGLQGGSDPPAFQLAERERL--------AKASAEKKKDSNL 577
            HFA+GLC++CY++F + SGGL+GGSDPPAFQ AE++RL        A A+ E   + +L
Sbjct: 239 EHFAHGLCEKCYNKFTKLSGGLEGGSDPPAFQRAEKKRLEAAKRAEEAAAAKEAALEESL 298

Query: 578 CEKEVEEVDPFSQPNPNVNVEKKLDSQRSEGVVNEHQTVEEGVCGQSIGHEDIDNTGDES 757
           C+ +  EV+    P   ++ +K      SEG++N+    ++       G E+ +   D  
Sbjct: 299 CDTQNSEVESAMTPRKGLSGDKS-SKMGSEGLINDSMPPKD----PEEGGENCEGNAD-P 352

Query: 758 ESFSDIDDVEVNGYLHDEEEKRLKTKIWESLNWEYL 865
           ES SDIDD EV+GYLH+EEE + K  IWE +N EYL
Sbjct: 353 ESLSDIDDAEVDGYLHNEEETQYKKIIWEEMNKEYL 388


>ref|NP_001141990.1| uncharacterized protein LOC100274140 [Zea mays]
           gi|194706710|gb|ACF87439.1| unknown [Zea mays]
           gi|413946300|gb|AFW78949.1| hypothetical protein
           ZEAMMB73_136276 [Zea mays]
          Length = 580

 Score =  265 bits (677), Expect = 3e-68
 Identities = 144/276 (52%), Positives = 186/276 (67%), Gaps = 8/276 (2%)
 Frame = +2

Query: 62  LLGSKTRLFNDVERTARRILASMKRDWMQTGRKPSGLCGAALYIAAHSFGLECSKSDVES 241
           LLG +    NDV  TA RI+ASMKRDWMQTGRKPSGLCGAALYIAA S G   +K+D+ S
Sbjct: 187 LLGRRN---NDVSDTALRIVASMKRDWMQTGRKPSGLCGAALYIAALSHGCNYTKADIVS 243

Query: 242 IVHVCEATLTKRLIEFENTESGNLTIEEFNLKADELEKEPRLIMSSEARELLCKHNESET 421
           +VHVCEATLTKRLIEFENT+SG+LTIEEF   ADE  +EP    S ++ E+LCKH +   
Sbjct: 244 VVHVCEATLTKRLIEFENTDSGSLTIEEFLATADESNEEPVSKHSPKSGEILCKHKDKGF 303

Query: 422 PHFANGLCKECYDEFVEFSGGLQGGSDPPAFQLAERERL--------AKASAEKKKDSNL 577
            HFA+GLC++CY++F + SGGL+GGSDPPAFQ AE++RL        A A+ E   + +L
Sbjct: 304 EHFAHGLCEKCYNKFTKLSGGLEGGSDPPAFQRAEKKRLEAAKRAEEAAAAKEAALEESL 363

Query: 578 CEKEVEEVDPFSQPNPNVNVEKKLDSQRSEGVVNEHQTVEEGVCGQSIGHEDIDNTGDES 757
           C+ +  EV+    P   ++ +K      SEG++N+    ++       G E+ +   D  
Sbjct: 364 CDTQNSEVESAMTPRKGLSGDKS-SKMGSEGLINDSMPPKD----PEEGGENCEGNAD-P 417

Query: 758 ESFSDIDDVEVNGYLHDEEEKRLKTKIWESLNWEYL 865
           ES SDIDD EV+GYLH+EEE + K  IWE +N EYL
Sbjct: 418 ESLSDIDDAEVDGYLHNEEETQYKKIIWEEMNKEYL 453


>ref|XP_003578728.1| PREDICTED: transcription factor IIIB 60 kDa subunit-like
           [Brachypodium distachyon]
          Length = 580

 Score =  254 bits (649), Expect = 4e-65
 Identities = 142/275 (51%), Positives = 191/275 (69%), Gaps = 7/275 (2%)
 Frame = +2

Query: 62  LLGSKTRLFNDVERTARRILASMKRDWMQTGRKPSGLCGAALYIAAHSFGLECSKSDVES 241
           LLG +    N V  TA RI+ASMKRDWMQTGRKPSGLCGAALYIAA S G   +KSD+  
Sbjct: 187 LLGKRD---NAVSDTALRIVASMKRDWMQTGRKPSGLCGAALYIAALSHGYNYTKSDIVG 243

Query: 242 IVHVCEATLTKRLIEFENTESGNLTIEEFNLKADELEKEPRLIMSSEARELLCKHNESET 421
           +VH+CEATLTKRLIEFENT+SG+LTIE+F  KAD  E++P    S ++ E+LCKH + +T
Sbjct: 244 VVHICEATLTKRLIEFENTDSGSLTIEDFLAKAD--EEQPVSKPSRKSGEVLCKHKDKDT 301

Query: 422 PHFANGLCKECYDEFVEFSGGLQGGSDPPAFQLAERERLAKASAEKKKDSNLCEKEVEEV 601
            HFA+GLC++CY++F++ SGGL+GG+DPPAFQ AER+RL +A+ + ++ + L E  + E 
Sbjct: 302 EHFAHGLCEKCYNKFIKMSGGLEGGADPPAFQRAERQRL-EAAKKSEEAAALKEAALGES 360

Query: 602 DPFSQPNPNVNVEKKLDSQRSEGVVNEHQTV-EEGVCGQSIGHEDIDNTGDES------E 760
           +   Q   N +VE  + S +   + ++  T+  E     +I  +D +  G+ S      E
Sbjct: 361 NCEIQ---NSDVEDNIISLKKGPIGDKSSTIPSEQNANDNIASKDPEVGGENSKPDADPE 417

Query: 761 SFSDIDDVEVNGYLHDEEEKRLKTKIWESLNWEYL 865
           SFSDIDDVEV+GYLH+EEE   K  IWE +N EY+
Sbjct: 418 SFSDIDDVEVDGYLHNEEETHYKKIIWEEMNKEYI 452