BLASTX nr result
ID: Coptis21_contig00008132
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00008132 (232 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002525805.1| pentatricopeptide repeat-containing protein,... 78 9e-13 ref|XP_003532739.1| PREDICTED: putative pentatricopeptide repeat... 75 4e-12 ref|XP_003517834.1| PREDICTED: putative pentatricopeptide repeat... 75 6e-12 ref|XP_003517833.1| PREDICTED: putative pentatricopeptide repeat... 75 6e-12 ref|XP_003517841.1| PREDICTED: putative pentatricopeptide repeat... 74 9e-12 >ref|XP_002525805.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] gi|223534892|gb|EEF36579.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] Length = 182 Score = 77.8 bits (190), Expect = 9e-13 Identities = 38/76 (50%), Positives = 54/76 (71%) Frame = -2 Query: 228 IIIDGMCKDGKISEAKELFRTLSARDLQLINTRTYNVMISGCFREGNLKEAQDLFFEMQE 49 II+DGMCK GK+++AKELF TL LQ + RTYN++I EG+L+EA +F EM+E Sbjct: 65 IIVDGMCKAGKLNDAKELFSTLPIEGLQP-DVRTYNILIKVFCNEGSLEEAYQVFREMEE 123 Query: 48 KGFVPDDFMFNIMVQG 1 G +PD +N+++QG Sbjct: 124 GGSLPDGCSYNVIIQG 139 >ref|XP_003532739.1| PREDICTED: putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial-like [Glycine max] Length = 594 Score = 75.5 bits (184), Expect = 4e-12 Identities = 35/77 (45%), Positives = 53/77 (68%) Frame = -2 Query: 231 TIIIDGMCKDGKISEAKELFRTLSARDLQLINTRTYNVMISGCFREGNLKEAQDLFFEMQ 52 +I++DGMC GK++ A ELF +L + LQ IN TY +MI G ++G+L +A+DL M+ Sbjct: 466 SILLDGMCSAGKLNAAWELFSSLPGKGLQ-INVYTYTIMIKGLCKQGSLDKAEDLLINME 524 Query: 51 EKGFVPDDFMFNIMVQG 1 E G +PD+ +N+ VQG Sbjct: 525 ENGCLPDNCTYNVFVQG 541 >ref|XP_003517834.1| PREDICTED: putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial-like [Glycine max] Length = 543 Score = 75.1 bits (183), Expect = 6e-12 Identities = 35/77 (45%), Positives = 56/77 (72%) Frame = -2 Query: 231 TIIIDGMCKDGKISEAKELFRTLSARDLQLINTRTYNVMISGCFREGNLKEAQDLFFEMQ 52 +II++GMC GK+++A ELF LS++ ++ I+ TYN+MI+G +EG L +A+DL +M+ Sbjct: 415 SIILNGMCSSGKLNDALELFSYLSSKGVK-IDVVTYNIMINGLCKEGLLDDAEDLLMKME 473 Query: 51 EKGFVPDDFMFNIMVQG 1 E G PD+ +N+ VQG Sbjct: 474 ENGCPPDECTYNVFVQG 490 Score = 55.8 bits (133), Expect = 3e-06 Identities = 28/72 (38%), Positives = 41/72 (56%) Frame = -2 Query: 225 IIDGMCKDGKISEAKELFRTLSARDLQLINTRTYNVMISGCFREGNLKEAQDLFFEMQEK 46 ++DG+CKDG + EA +LF ++ + +Q N TYN +I G KEA L M K Sbjct: 172 VVDGLCKDGMVFEALDLFSQMTGKGIQ-PNLFTYNCLIHGLCNFDRWKEAAPLLANMMRK 230 Query: 45 GFVPDDFMFNIM 10 G +PD FN++ Sbjct: 231 GIMPDVQTFNVI 242 >ref|XP_003517833.1| PREDICTED: putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial-like [Glycine max] Length = 595 Score = 75.1 bits (183), Expect = 6e-12 Identities = 35/77 (45%), Positives = 56/77 (72%) Frame = -2 Query: 231 TIIIDGMCKDGKISEAKELFRTLSARDLQLINTRTYNVMISGCFREGNLKEAQDLFFEMQ 52 +II++GMC GK+++A ELF LS++ ++ I+ TYN+MI+G +EG L +A+DL +M+ Sbjct: 467 SIILNGMCSSGKLNDALELFSYLSSKGVK-IDVVTYNIMINGLCKEGLLDDAEDLLMKME 525 Query: 51 EKGFVPDDFMFNIMVQG 1 E G PD+ +N+ VQG Sbjct: 526 ENGCPPDECTYNVFVQG 542 >ref|XP_003517841.1| PREDICTED: putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial-like [Glycine max] Length = 600 Score = 74.3 bits (181), Expect = 9e-12 Identities = 35/76 (46%), Positives = 54/76 (71%) Frame = -2 Query: 228 IIIDGMCKDGKISEAKELFRTLSARDLQLINTRTYNVMISGCFREGNLKEAQDLFFEMQE 49 II+DGMC GK+++A ELF LS++ ++ I+ TYN+MI G +EG L +A+DL +M+E Sbjct: 473 IILDGMCSSGKLNDALELFSYLSSKGVK-IDVVTYNIMIKGLCKEGLLDDAEDLLMKMEE 531 Query: 48 KGFVPDDFMFNIMVQG 1 G P++ +N+ VQG Sbjct: 532 NGCPPNECTYNVFVQG 547