BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00008127
         (1233 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN61992.1| hypothetical protein VITISV_030445 [Vitis vinifera]   355   1e-95
ref|XP_002281118.2| PREDICTED: transcription factor bHLH110-like...   354   2e-95
ref|XP_002510430.1| transcription factor, putative [Ricinus comm...   301   3e-79
ref|NP_174087.1| transcription factor bHLH110 [Arabidopsis thali...   226   1e-56
emb|CAN70945.1| hypothetical protein VITISV_002869 [Vitis vinifera]   221   3e-55

>emb|CAN61992.1| hypothetical protein VITISV_030445 [Vitis vinifera]
          Length = 512

 Score =  355 bits (912), Expect = 1e-95
 Identities = 200/339 (58%), Positives = 247/339 (72%), Gaps = 14/339 (4%)
 Frame = -1

Query: 1233 GNFTNQSAHELHLARIKEELSESPHRFSETINCLSSNNPEEFHLPSTSYIKERRDLNDLS 1054
            G+FT+QSAH+LH   IKEELSES  +F+E IN  SS+  E+ HLP TSYI+ + DLNDLS
Sbjct: 117  GSFTSQSAHDLH-PXIKEELSESFPKFTEMINS-SSSAVEDLHLPPTSYIRSK-DLNDLS 173

Query: 1053 EKILLKTFSSGCQLNDLQ--DGTLYSNSQS---SVRGTATSTRGNFSQIFPSANVSTTNS 889
            EK+LLK+FSSGCQ+N LQ   G   +N+QS      G A  +RG+FSQIFP+ N+S  + 
Sbjct: 174  EKLLLKSFSSGCQINGLQLSAGEFXANAQSCNTGFGGVAIPSRGHFSQIFPTINISNLSQ 233

Query: 888  PFSS------MNMQVLDLLTSTKSGGGFGQLGHNNLGLFKETPSFDLDHMKESSHWLTSS 727
            P S+      MN+Q LDLLTS +  G F Q  HNNLGLFK++ SF LDH+++S++  ++S
Sbjct: 234  PSSTISSSLDMNLQALDLLTSARFSGTFSQPSHNNLGLFKDSLSFGLDHLQZSTNRPSNS 293

Query: 726  SNKVSSFANEVTETKRSSSVMEPKASNTASKKPRFESRTSLAPFKVRKEKLGDRIAALQQ 547
            S+K+S F N V E KR SS +EPKA+    KK R ESR S  P KVRKEKLGDRIAALQQ
Sbjct: 294  SSKISPFTNGVAEVKRPSSFLEPKATQATPKKSRLESRASCPPIKVRKEKLGDRIAALQQ 353

Query: 546  LVAPFGKTDTASVLMEAIGYIKFLQDQVETLSVPYMKSLCNNSARSIHKSLKEGD-DEDT 370
            LVAPFGKTDTASVLMEAIGYIKFLQ+QVETLSVPYMKS  N S+ S+     +G+  E+ 
Sbjct: 354  LVAPFGKTDTASVLMEAIGYIKFLQNQVETLSVPYMKSSRNKSSISMQGGSADGEGSEEP 413

Query: 369  KRDLRSRGLCLVPMSCISYIASDNIGG--WLGSDYGGRT 259
            +RDLRSRGLCLVP+SC+SY+ +D  GG  W    +GG T
Sbjct: 414  RRDLRSRGLCLVPLSCMSYVTTDCGGGGVWPPPSFGGGT 452


>ref|XP_002281118.2| PREDICTED: transcription factor bHLH110-like [Vitis vinifera]
            gi|302142540|emb|CBI19743.3| unnamed protein product
            [Vitis vinifera]
          Length = 427

 Score =  354 bits (909), Expect = 2e-95
 Identities = 200/339 (58%), Positives = 247/339 (72%), Gaps = 14/339 (4%)
 Frame = -1

Query: 1233 GNFTNQSAHELHLARIKEELSESPHRFSETINCLSSNNPEEFHLPSTSYIKERRDLNDLS 1054
            G+FT+QSAH+LH   IKEELSES  +F+E IN  SS+  E+ HLP TSYI+ + DLNDLS
Sbjct: 92   GSFTSQSAHDLH-PTIKEELSESFPKFTEMINS-SSSAVEDLHLPPTSYIRSK-DLNDLS 148

Query: 1053 EKILLKTFSSGCQLNDLQ--DGTLYSNSQS---SVRGTATSTRGNFSQIFPSANVSTTNS 889
            EK+LLK+FSSGCQ+N LQ   G   +N+QS      G A  +RG+FSQIFP+ N+S  + 
Sbjct: 149  EKLLLKSFSSGCQINGLQLSAGEFCANAQSCNTGFGGVAIPSRGHFSQIFPTINISNLSQ 208

Query: 888  PFSS------MNMQVLDLLTSTKSGGGFGQLGHNNLGLFKETPSFDLDHMKESSHWLTSS 727
            P S+      MN+Q LDLLTS +  G F Q  HNNLGLFK++ SF LDH+++S++  ++S
Sbjct: 209  PSSTISSSLDMNLQALDLLTSARFSGTFSQPSHNNLGLFKDSLSFGLDHLQQSTNRPSNS 268

Query: 726  SNKVSSFANEVTETKRSSSVMEPKASNTASKKPRFESRTSLAPFKVRKEKLGDRIAALQQ 547
            S+K+S F N V E KR SS +EPKA+    KK R ESR S  P KVRKEKLGDRIAALQQ
Sbjct: 269  SSKISPFTNGVAEVKRPSSFLEPKATQATPKKSRLESRASCPPIKVRKEKLGDRIAALQQ 328

Query: 546  LVAPFGKTDTASVLMEAIGYIKFLQDQVETLSVPYMKSLCNNSARSIHKSLKEGD-DEDT 370
            LVAPFGKTDTASVLMEAIGYIKFLQ+QVETLSVPYMKS  N S+ S+     +G+  E+ 
Sbjct: 329  LVAPFGKTDTASVLMEAIGYIKFLQNQVETLSVPYMKSSRNKSSISMQGGSADGEGSEEP 388

Query: 369  KRDLRSRGLCLVPMSCISYIASDNIGG--WLGSDYGGRT 259
            +RDLRSRGLCLVP+SC+SY+ +D  GG  W    +GG T
Sbjct: 389  RRDLRSRGLCLVPLSCMSYVTTDCGGGGVWPPPSFGGGT 427


>ref|XP_002510430.1| transcription factor, putative [Ricinus communis]
            gi|223551131|gb|EEF52617.1| transcription factor,
            putative [Ricinus communis]
          Length = 436

 Score =  301 bits (770), Expect = 3e-79
 Identities = 188/346 (54%), Positives = 232/346 (67%), Gaps = 22/346 (6%)
 Frame = -1

Query: 1230 NFTNQSAHELHLARIKEE--LSESPHRFSETINCLS--SNNPEEFHLPSTSYIK-ERRDL 1066
            N      H+L L +IKEE  LS+S  +F+E IN  S  SN  ++ HL STSYIK E++ +
Sbjct: 97   NHQTSHDHDLQLGKIKEEDELSDSFTKFTEMINSTSAASNTDQDSHLSSTSYIKDEQKYM 156

Query: 1065 NDLSEKILLKTFSSGCQLNDLQDGTLYSNSQ-SSVRGTATSTRGNFSQIFPSANVSTTNS 889
             DLSEK+LLKT SSG  +N       +S S   S  G+   +RGNFSQI+PS N+S  N 
Sbjct: 157  TDLSEKLLLKTISSGFPINGHPQ---FSPSLICSSFGSPIPSRGNFSQIYPSINISNLNR 213

Query: 888  PFS-------SMNMQVLDLLTSTKSGGGFGQLGHNNLGLFKETPSFDLDHMKESSHWLTS 730
              S        MN+Q LDLLTST+ GG FGQ  H+NLG++K+  S+D D M+  +H  + 
Sbjct: 214  STSPSISGSFDMNLQALDLLTSTRFGGSFGQPSHDNLGIYKDNISYDFDRMQ--NHMPSC 271

Query: 729  SSNKVSSFAN-EVTETKR-SSSVMEPKAS-NTASKKPRFESRTSLAPFKVRKEKLGDRIA 559
            S +K+SS    E TE KR  SS+MEPKA+   A KK R E+R S  PFKVRKEKLGDRIA
Sbjct: 272  SHSKISSITTKETTEAKRPGSSLMEPKATLQAAPKKSRLETRASCPPFKVRKEKLGDRIA 331

Query: 558  ALQQLVAPFGKTDTASVLMEAIGYIKFLQDQVETLSVPYMKSLCNNSARSIHK--SLKEG 385
            ALQQLVAPFGKTDTASVLMEAIGYIKFLQ+QVETLSVPYMKS  N S+R+     +++EG
Sbjct: 332  ALQQLVAPFGKTDTASVLMEAIGYIKFLQNQVETLSVPYMKSSRNKSSRNSQSGPTVEEG 391

Query: 384  DDEDTKRDLRSRGLCLVPMSCISYIASDNIGG----WLGSDYGGRT 259
            + E  K+DLRSRGLCLVP+SC+SY+  D  G     W    +GG T
Sbjct: 392  NFE-PKKDLRSRGLCLVPLSCMSYVTGDGGGSSGNIWPPPSFGGGT 436


>ref|NP_174087.1| transcription factor bHLH110 [Arabidopsis thaliana]
            gi|218563530|sp|Q9SFZ3.2|BH110_ARATH RecName:
            Full=Transcription factor bHLH110; AltName: Full=Basic
            helix-loop-helix protein 110; Short=AtbHLH110; Short=bHLH
            110; AltName: Full=Transcription factor EN 59; AltName:
            Full=bHLH transcription factor bHLH110
            gi|332192739|gb|AEE30860.1| transcription factor bHLH110
            [Arabidopsis thaliana]
          Length = 453

 Score =  226 bits (575), Expect = 1e-56
 Identities = 158/346 (45%), Positives = 215/346 (62%), Gaps = 29/346 (8%)
 Frame = -1

Query: 1221 NQSAHELH--LARIKEELSESPHRFSETINCLSSNNPEEFHLPSTSYIKERRDLNDLSEK 1048
            +QS+++ H  L +IKEELS S    S+    +S           T+Y+K      D +EK
Sbjct: 103  DQSSYQHHEGLLKIKEELSSST--ISDHQEGISKFTDMLNSPVITNYLKINEH-KDYTEK 159

Query: 1047 ILLKTFSSGCQLNDLQDGTLYSNSQSSVRGTATSTRGNFSQIFPSANVSTTNS------- 889
            +LLK+ SSG  +N     +L S+S SS   ++ S RGNFSQI+PS N+S+ +        
Sbjct: 160  LLLKSMSSGFPINGDYGSSLPSSSSSS-SPSSQSHRGNFSQIYPSVNISSLSESRKMSMD 218

Query: 888  -------PFSSMNMQVLD--LLTSTKSGGGFGQLGHNNLGLFKET-PSFDLD---HMKES 748
                   PF  +NMQV D  L         F     ++LG+ + + PSF L    H++++
Sbjct: 219  DMSNISRPFD-INMQVFDGRLFEGNVLVPPFNAQEISSLGMSRGSLPSFGLPFHHHLQQT 277

Query: 747  SHWLTSS-SNKVSSFANE--VTETKRSSSVMEPKASNTASKKPRFESRTSLAPFKVRKEK 577
               L+SS ++++  F+NE   +E KR + +M  KA   ASKKPR ESR+S  PFKVRKEK
Sbjct: 278  LPHLSSSPTHQMEMFSNEPQTSEGKRHNFLMATKAGENASKKPRVESRSSCPPFKVRKEK 337

Query: 576  LGDRIAALQQLVAPFGKTDTASVLMEAIGYIKFLQDQVETLSVPYMKSLCN--NSARSIH 403
            LGDRIAALQQLV+PFGKTDTASVLMEAIGYIKFLQ Q+ETLSVPYM++  N    A  + 
Sbjct: 338  LGDRIAALQQLVSPFGKTDTASVLMEAIGYIKFLQSQIETLSVPYMRASRNRPGKASQLV 397

Query: 402  KSLKEGDDEDTKRDLRSRGLCLVPMSCISYIASD--NIGGWLGSDY 271
               +EGD+E+T RDLRSRGLCLVP+SC++Y+  D  + GG +G+ +
Sbjct: 398  SQSQEGDEEET-RDLRSRGLCLVPLSCMTYVTGDGGDGGGGVGTGF 442


>emb|CAN70945.1| hypothetical protein VITISV_002869 [Vitis vinifera]
          Length = 396

 Score =  221 bits (563), Expect = 3e-55
 Identities = 155/331 (46%), Positives = 195/331 (58%), Gaps = 16/331 (4%)
 Frame = -1

Query: 1230 NFTNQSAHE-LHLARIKEELSESPHRFSETINCLSSNNPEEFHL-PST-SYIKE-RRDLN 1063
            +FT+QS  E L+  +IKEEL  S  +F E ++  + +N EE HL PS  SY+K  ++   
Sbjct: 89   SFTHQSPTEVLNFTKIKEELPNSFPKFGEMVD--NHSNVEELHLVPSIGSYMKHGQQPFR 146

Query: 1062 DLSEKI--LLKTFSSGCQLNDLQDGTLYSNSQSSVR-GTA-TSTRGNFSQIFPSANVSTT 895
            DLSE +  L    S G QL     G  YSN++ S   G+A TS+R NFS  FPS N+   
Sbjct: 147  DLSENLCWLSSNSSEGLQL---LAGDSYSNARESEGYGSAYTSSRFNFSHGFPSXNLP-- 201

Query: 894  NSPFSS--------MNMQVLDLLTSTKSGGGFGQLGHNNLGLFKETPSFDLDHMKESSHW 739
            N  FSS        +N+Q LDLL S   G G  +  H++L  FKE+   D DHM+ES H 
Sbjct: 202  NLDFSSSLVSNSLGLNLQTLDLLASANYGXGSSKSSHBDLDPFKESMPLDHDHMQESXHN 261

Query: 738  LTSSSNKVSSFANEVTETKRSSSVMEPKASNTASKKPRFESRTSLAPFKVRKEKLGDRIA 559
             ++SS   S+F N V+ TK + S   PKA + A+K   F  R+S  P KVRKEKLGDRIA
Sbjct: 262  PSNSSKMTSAFMNGVSRTKVTRSRTAPKALHAATKMSGFGPRSSYPPLKVRKEKLGDRIA 321

Query: 558  ALQQLVAPFGKTDTASVLMEAIGYIKFLQDQVETLSVPYMKSLCNNSARSIHKSLKEGDD 379
            ALQ+LVAPFGKTDTASVL EAIGYI+FL DQ++                    S  E   
Sbjct: 322  ALQRLVAPFGKTDTASVLTEAIGYIQFLHDQIQ-------------------GSSDEDGK 362

Query: 378  EDTKRDLRSRGLCLVPMSCISYIASDNIGGW 286
            E  KRDLRSRGLCLVP+SC SYI + + G W
Sbjct: 363  EGAKRDLRSRGLCLVPVSCTSYITACSXGVW 393