BLASTX nr result

ID: Coptis21_contig00008122 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00008122
         (481 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518975.1| Plastid lipid-associated protein 3, chloropl...    99   5e-19
ref|XP_002881399.1| hypothetical protein ARALYDRAFT_902655 [Arab...    98   6e-19
ref|XP_004148751.1| PREDICTED: plastid lipid-associated protein ...    95   7e-18
ref|XP_002276479.1| PREDICTED: probable plastid-lipid-associated...    95   7e-18
gb|AAK68845.1| putative fibrillin [Arabidopsis thaliana] gi|2014...    94   1e-17

>ref|XP_002518975.1| Plastid lipid-associated protein 3, chloroplast precursor, putative
           [Ricinus communis] gi|223541962|gb|EEF43508.1| Plastid
           lipid-associated protein 3, chloroplast precursor,
           putative [Ricinus communis]
          Length = 367

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 53/98 (54%), Positives = 61/98 (62%), Gaps = 6/98 (6%)
 Frame = -1

Query: 277 IVDEWGEKTEPEPETSYTKFSDADPPKXXXXXXXXXXXXXGNGTA------LYDKLGDLK 116
           I DEWGE+ EPE +  Y K +D DPPK              NG+A        D++ DLK
Sbjct: 88  ITDEWGEQVEPETQPEYPKGTDEDPPKDDDEWGAEYESGG-NGSAGGLVVEKDDRIEDLK 146

Query: 115 RSLVDTFYGTELGFNASPEVRGEVLELVNQLELFNPTP 2
           R LVDT YGT+ GF ASPE+RGEVLELVNQLE  NPTP
Sbjct: 147 RCLVDTVYGTKFGFQASPEIRGEVLELVNQLEALNPTP 184


>ref|XP_002881399.1| hypothetical protein ARALYDRAFT_902655 [Arabidopsis lyrata subsp.
           lyrata] gi|297327238|gb|EFH57658.1| hypothetical protein
           ARALYDRAFT_902655 [Arabidopsis lyrata subsp. lyrata]
          Length = 375

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 50/94 (53%), Positives = 61/94 (64%), Gaps = 4/94 (4%)
 Frame = -1

Query: 271 DEWGEKTEPEPETSYTKFSDADPPKXXXXXXXXXXXXXG----NGTALYDKLGDLKRSLV 104
           DEWGEK+ PEPE S ++F+++DPP+                  NG+A+ DK  +LKR L 
Sbjct: 98  DEWGEKSGPEPEESGSRFAESDPPRNEDEWEEEIGKEVEIDAGNGSAVSDKTWELKRCLA 157

Query: 103 DTFYGTELGFNASPEVRGEVLELVNQLELFNPTP 2
           DT YGTELGF A  +VR EVLELVNQLE  NPTP
Sbjct: 158 DTVYGTELGFRAGSDVRAEVLELVNQLEALNPTP 191


>ref|XP_004148751.1| PREDICTED: plastid lipid-associated protein 3, chloroplastic-like
           [Cucumis sativus] gi|449517090|ref|XP_004165579.1|
           PREDICTED: plastid lipid-associated protein 3,
           chloroplastic-like [Cucumis sativus]
          Length = 363

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 51/102 (50%), Positives = 60/102 (58%), Gaps = 8/102 (7%)
 Frame = -1

Query: 283 PKIVDEWGEKTEPEPETSYTKFSDADPPKXXXXXXXXXXXXXGNGTALY--------DKL 128
           PKI DEWGE+TEPEP+++ T+ SD DPPK              +             DKL
Sbjct: 78  PKITDEWGEETEPEPDSTLTRLSDFDPPKEDDEWGGDEGNGKPSVVEEKSEEYVDNRDKL 137

Query: 127 GDLKRSLVDTFYGTELGFNASPEVRGEVLELVNQLELFNPTP 2
            +LKR LVDT YGTE GF A  E R E+LE+VNQLE  NPTP
Sbjct: 138 LELKRCLVDTVYGTEFGFRAGLEERAEILEIVNQLEAANPTP 179


>ref|XP_002276479.1| PREDICTED: probable plastid-lipid-associated protein 3,
           chloroplastic-like [Vitis vinifera]
          Length = 382

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 55/108 (50%), Positives = 61/108 (56%), Gaps = 16/108 (14%)
 Frame = -1

Query: 277 IVDEWGEKTEPE------PETSYTKFSDADPPKXXXXXXXXXXXXXG-----NGTAL--- 140
           + DEWGEK EPE      PE SYTK S ADPP+                   NG A    
Sbjct: 90  VADEWGEKAEPELEPEPEPEDSYTKLSGADPPRDEDEWGGDGDAKDAYIKSGNGIATAAA 149

Query: 139 --YDKLGDLKRSLVDTFYGTELGFNASPEVRGEVLELVNQLELFNPTP 2
              D++GDLKR LVDT YGT  GF A+ EVR EV+ELVNQLE  NPTP
Sbjct: 150 AEVDEVGDLKRCLVDTVYGTNFGFEATAEVRAEVVELVNQLEAVNPTP 197


>gb|AAK68845.1| putative fibrillin [Arabidopsis thaliana]
           gi|20148241|gb|AAM10011.1| putative fibrillin
           [Arabidopsis thaliana]
          Length = 376

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 50/96 (52%), Positives = 59/96 (61%), Gaps = 4/96 (4%)
 Frame = -1

Query: 277 IVDEWGEKTEPEPETSYTKFSDADPPKXXXXXXXXXXXXXG----NGTALYDKLGDLKRS 110
           I DEWGEK+ PE E S T+F ++DPP+                  NG+A+ D   +LKR 
Sbjct: 97  ITDEWGEKSGPELEESGTRFMESDPPRNEDEWGGEIGGETEADAGNGSAVSDPTWELKRC 156

Query: 109 LVDTFYGTELGFNASPEVRGEVLELVNQLELFNPTP 2
           L D+ YGTELGF A  EVR EVLELVNQLE  NPTP
Sbjct: 157 LADSVYGTELGFKAGSEVRAEVLELVNQLEALNPTP 192


Top