BLASTX nr result
ID: Coptis21_contig00008097
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00008097 (202 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002319940.1| predicted protein [Populus trichocarpa] gi|2... 67 2e-09 ref|XP_002333182.1| predicted protein [Populus trichocarpa] gi|2... 63 2e-08 ref|XP_003549154.1| PREDICTED: putative pentatricopeptide repeat... 61 1e-07 ref|XP_004167183.1| PREDICTED: pentatricopeptide repeat-containi... 60 2e-07 ref|XP_004148967.1| PREDICTED: pentatricopeptide repeat-containi... 60 2e-07 >ref|XP_002319940.1| predicted protein [Populus trichocarpa] gi|222858316|gb|EEE95863.1| predicted protein [Populus trichocarpa] Length = 555 Score = 67.0 bits (162), Expect = 2e-09 Identities = 31/58 (53%), Positives = 42/58 (72%) Frame = +3 Query: 6 LFRNGCSAEAMELFRVMENNGMKADVLIYNIIIDGMCKDGKISEAKEIFRTLSARDLQ 179 L + G +AM LFR MEN+G+K D++ YNI+IDGMCK GK +A+E+F LS + LQ Sbjct: 451 LSKQGYLDQAMGLFRAMENSGLKPDLVTYNIMIDGMCKYGKFKDARELFAELSVKGLQ 508 >ref|XP_002333182.1| predicted protein [Populus trichocarpa] gi|222835036|gb|EEE73485.1| predicted protein [Populus trichocarpa] Length = 319 Score = 63.2 bits (152), Expect = 2e-08 Identities = 28/58 (48%), Positives = 41/58 (70%) Frame = +3 Query: 3 GLFRNGCSAEAMELFRVMENNGMKADVLIYNIIIDGMCKDGKISEAKEIFRTLSARDL 176 GL + G +A+ELFR M+NN + D++IYNI+ID MCK GK+ +A+E+F L + L Sbjct: 154 GLSKQGYLDQALELFREMQNNYLNPDLVIYNILIDAMCKSGKLEDARELFLKLHVKGL 211 >ref|XP_003549154.1| PREDICTED: putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial-like [Glycine max] Length = 567 Score = 60.8 bits (146), Expect = 1e-07 Identities = 25/60 (41%), Positives = 44/60 (73%) Frame = +3 Query: 3 GLFRNGCSAEAMELFRVMENNGMKADVLIYNIIIDGMCKDGKISEAKEIFRTLSARDLQL 182 GL++ +EAM LFR ME +G+ D++IYNI++DGMCK GK+++A+++ + + L++ Sbjct: 411 GLYKCWLDSEAMTLFRAMEKSGLDLDIVIYNIMLDGMCKMGKLNDARKLLSFVLVKGLKI 470 >ref|XP_004167183.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470, mitochondrial-like [Cucumis sativus] Length = 605 Score = 60.1 bits (144), Expect = 2e-07 Identities = 27/59 (45%), Positives = 39/59 (66%) Frame = +3 Query: 3 GLFRNGCSAEAMELFRVMENNGMKADVLIYNIIIDGMCKDGKISEAKEIFRTLSARDLQ 179 GL +NGC EAMELF +++ +K D+ +N +IDG+CK GK+ A E+F L +LQ Sbjct: 461 GLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQ 519 >ref|XP_004148967.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470, mitochondrial-like [Cucumis sativus] Length = 597 Score = 60.1 bits (144), Expect = 2e-07 Identities = 27/59 (45%), Positives = 39/59 (66%) Frame = +3 Query: 3 GLFRNGCSAEAMELFRVMENNGMKADVLIYNIIIDGMCKDGKISEAKEIFRTLSARDLQ 179 GL +NGC EAMELF +++ +K D+ +N +IDG+CK GK+ A E+F L +LQ Sbjct: 453 GLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQ 511