BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00008097
         (202 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002319940.1| predicted protein [Populus trichocarpa] gi|2...    67   2e-09
ref|XP_002333182.1| predicted protein [Populus trichocarpa] gi|2...    63   2e-08
ref|XP_003549154.1| PREDICTED: putative pentatricopeptide repeat...    61   1e-07
ref|XP_004167183.1| PREDICTED: pentatricopeptide repeat-containi...    60   2e-07
ref|XP_004148967.1| PREDICTED: pentatricopeptide repeat-containi...    60   2e-07

>ref|XP_002319940.1| predicted protein [Populus trichocarpa] gi|222858316|gb|EEE95863.1|
           predicted protein [Populus trichocarpa]
          Length = 555

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 31/58 (53%), Positives = 42/58 (72%)
 Frame = +3

Query: 6   LFRNGCSAEAMELFRVMENNGMKADVLIYNIIIDGMCKDGKISEAKEIFRTLSARDLQ 179
           L + G   +AM LFR MEN+G+K D++ YNI+IDGMCK GK  +A+E+F  LS + LQ
Sbjct: 451 LSKQGYLDQAMGLFRAMENSGLKPDLVTYNIMIDGMCKYGKFKDARELFAELSVKGLQ 508


>ref|XP_002333182.1| predicted protein [Populus trichocarpa] gi|222835036|gb|EEE73485.1|
           predicted protein [Populus trichocarpa]
          Length = 319

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 28/58 (48%), Positives = 41/58 (70%)
 Frame = +3

Query: 3   GLFRNGCSAEAMELFRVMENNGMKADVLIYNIIIDGMCKDGKISEAKEIFRTLSARDL 176
           GL + G   +A+ELFR M+NN +  D++IYNI+ID MCK GK+ +A+E+F  L  + L
Sbjct: 154 GLSKQGYLDQALELFREMQNNYLNPDLVIYNILIDAMCKSGKLEDARELFLKLHVKGL 211


>ref|XP_003549154.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 567

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 25/60 (41%), Positives = 44/60 (73%)
 Frame = +3

Query: 3   GLFRNGCSAEAMELFRVMENNGMKADVLIYNIIIDGMCKDGKISEAKEIFRTLSARDLQL 182
           GL++    +EAM LFR ME +G+  D++IYNI++DGMCK GK+++A+++   +  + L++
Sbjct: 411 GLYKCWLDSEAMTLFRAMEKSGLDLDIVIYNIMLDGMCKMGKLNDARKLLSFVLVKGLKI 470


>ref|XP_004167183.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 605

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 27/59 (45%), Positives = 39/59 (66%)
 Frame = +3

Query: 3   GLFRNGCSAEAMELFRVMENNGMKADVLIYNIIIDGMCKDGKISEAKEIFRTLSARDLQ 179
           GL +NGC  EAMELF  +++  +K D+  +N +IDG+CK GK+  A E+F  L   +LQ
Sbjct: 461 GLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQ 519


>ref|XP_004148967.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 597

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 27/59 (45%), Positives = 39/59 (66%)
 Frame = +3

Query: 3   GLFRNGCSAEAMELFRVMENNGMKADVLIYNIIIDGMCKDGKISEAKEIFRTLSARDLQ 179
           GL +NGC  EAMELF  +++  +K D+  +N +IDG+CK GK+  A E+F  L   +LQ
Sbjct: 453 GLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQ 511