BLASTX nr result
ID: Coptis21_contig00008096
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00008096
(264 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABQ50550.1| hypothetical protein [Brassica rapa] 87 1e-15
gb|ABQ50558.1| hypothetical protein [Brassica rapa] 87 1e-15
dbj|BAD08211.1| hypothetical protein [Oryza sativa Indica Group]... 86 2e-15
ref|NP_197167.1| pentatricopeptide repeat-containing protein [Ar... 86 2e-15
ref|XP_002892702.1| hypothetical protein ARALYDRAFT_471420 [Arab... 86 2e-15
>gb|ABQ50550.1| hypothetical protein [Brassica rapa]
Length = 281
Score = 87.4 bits (215), Expect = 1e-15
Identities = 43/88 (48%), Positives = 59/88 (67%)
Frame = +1
Query: 1 LKGFKPNTITYSTLIDGFCKSGEVLVAKELLKDMIACGEKPDQITYSSLMRGLFRNGRSS 180
L+G NT+TYSTLI GFC++G++ VAKEL ++M++ G P +TY L+ GL NG
Sbjct: 73 LRGLVANTVTYSTLIQGFCEAGKLNVAKELFQEMVSRGVSPSVVTYGILLDGLCDNGELE 132
Query: 181 EAMELLRVMENNGMKADVLIYTIIIDGM 264
EA+E+L M+ M D+ IY III GM
Sbjct: 133 EALEILEKMQKCKMGIDIGIYNIIIHGM 160
Score = 57.0 bits (136), Expect = 2e-06
Identities = 27/86 (31%), Positives = 50/86 (58%)
Frame = +1
Query: 4 KGFKPNTITYSTLIDGFCKSGEVLVAKELLKDMIACGEKPDQITYSSLMRGLFRNGRSSE 183
+G P+TITY++LI G C + A +++ M++ G +P +TY +L+ G + R +
Sbjct: 4 RGIDPDTITYTSLIYGLCMENRLDEANQMMDLMVSKGCEPSIVTYGTLINGYCKAKRVVD 63
Query: 184 AMELLRVMENNGMKADVLIYTIIIDG 261
M+L R + G+ A+ + Y+ +I G
Sbjct: 64 GMKLFREISLRGLVANTVTYSTLIQG 89
>gb|ABQ50558.1| hypothetical protein [Brassica rapa]
Length = 277
Score = 87.4 bits (215), Expect = 1e-15
Identities = 43/88 (48%), Positives = 59/88 (67%)
Frame = +1
Query: 1 LKGFKPNTITYSTLIDGFCKSGEVLVAKELLKDMIACGEKPDQITYSSLMRGLFRNGRSS 180
L+G NT+TYSTLI GFC++G++ VAKEL ++M++ G P +TY L+ GL NG
Sbjct: 77 LRGLVANTVTYSTLIQGFCEAGKLNVAKELFQEMVSRGVSPSVVTYGILLDGLCDNGELE 136
Query: 181 EAMELLRVMENNGMKADVLIYTIIIDGM 264
EA+E+L M+ M D+ IY III GM
Sbjct: 137 EALEILEKMQKCKMGIDIGIYNIIIHGM 164
Score = 57.0 bits (136), Expect = 2e-06
Identities = 27/86 (31%), Positives = 50/86 (58%)
Frame = +1
Query: 4 KGFKPNTITYSTLIDGFCKSGEVLVAKELLKDMIACGEKPDQITYSSLMRGLFRNGRSSE 183
+G P+TITY++LI G C + A +++ M++ G +P +TY +L+ G + R +
Sbjct: 8 RGIDPDTITYTSLIYGLCMENRLDEANQMMDLMVSKGCEPSIVTYGTLINGYCKAKRVVD 67
Query: 184 AMELLRVMENNGMKADVLIYTIIIDG 261
M+L R + G+ A+ + Y+ +I G
Sbjct: 68 GMKLFREISLRGLVANTVTYSTLIQG 93
>dbj|BAD08211.1| hypothetical protein [Oryza sativa Indica Group]
gi|67906118|dbj|BAE00069.1| PPR protein [Oryza sativa
Indica Group]
Length = 794
Score = 86.3 bits (212), Expect = 2e-15
Identities = 39/86 (45%), Positives = 60/86 (69%)
Frame = +1
Query: 7 GFKPNTITYSTLIDGFCKSGEVLVAKELLKDMIACGEKPDQITYSSLMRGLFRNGRSSEA 186
G KPN ITYSTLIDG+C +G++ A +LL M++ G KPD +TY++L+ G + R +A
Sbjct: 509 GVKPNIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDA 568
Query: 187 MELLRVMENNGMKADVLIYTIIIDGM 264
+ L R ME++G+ D++ Y II+ G+
Sbjct: 569 LVLFREMESSGVSPDIITYNIILQGL 594
Score = 67.8 bits (164), Expect = 9e-10
Identities = 32/86 (37%), Positives = 55/86 (63%)
Frame = +1
Query: 7 GFKPNTITYSTLIDGFCKSGEVLVAKELLKDMIACGEKPDQITYSSLMRGLFRNGRSSEA 186
G KP+ +TY+TLI+G+CK + A L ++M + G PD ITY+ +++GLF+ R++ A
Sbjct: 544 GMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAA 603
Query: 187 MELLRVMENNGMKADVLIYTIIIDGM 264
EL + +G + ++ Y II+ G+
Sbjct: 604 KELYVGITESGTQLELSTYNIILHGL 629
Score = 67.4 bits (163), Expect = 1e-09
Identities = 32/85 (37%), Positives = 51/85 (60%)
Frame = +1
Query: 7 GFKPNTITYSTLIDGFCKSGEVLVAKELLKDMIACGEKPDQITYSSLMRGLFRNGRSSEA 186
G PN TY++++ G+C SG+ A LK M + G +PD +TY+SLM L +NGR +EA
Sbjct: 264 GVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEA 323
Query: 187 MELLRVMENNGMKADVLIYTIIIDG 261
++ M G+K ++ Y ++ G
Sbjct: 324 RKMFDSMTKRGLKPEITTYGTLLQG 348
Score = 64.7 bits (156), Expect = 8e-09
Identities = 33/86 (38%), Positives = 53/86 (61%)
Frame = +1
Query: 4 KGFKPNTITYSTLIDGFCKSGEVLVAKELLKDMIACGEKPDQITYSSLMRGLFRNGRSSE 183
+G +TI ++++ID CK G V+ +++L M+ G KP+ ITYS+L+ G G+ E
Sbjct: 473 RGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDE 532
Query: 184 AMELLRVMENNGMKADVLIYTIIIDG 261
A +LL M + GMK D + Y +I+G
Sbjct: 533 ATKLLASMVSVGMKPDCVTYNTLING 558
Score = 61.2 bits (147), Expect = 8e-08
Identities = 28/85 (32%), Positives = 52/85 (61%)
Frame = +1
Query: 4 KGFKPNTITYSTLIDGFCKSGEVLVAKELLKDMIACGEKPDQITYSSLMRGLFRNGRSSE 183
+G PN +TY+++I CK+ + A E+L M+ G P+ TY+S++ G +G+ E
Sbjct: 228 RGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKE 287
Query: 184 AMELLRVMENNGMKADVLIYTIIID 258
A+ L+ M ++G++ DV+ Y ++D
Sbjct: 288 AIGFLKKMHSDGVEPDVVTYNSLMD 312
Score = 56.6 bits (135), Expect = 2e-06
Identities = 27/83 (32%), Positives = 48/83 (57%)
Frame = +1
Query: 7 GFKPNTITYSTLIDGFCKSGEVLVAKELLKDMIACGEKPDQITYSSLMRGLFRNGRSSEA 186
G +P+ +TY++L+D CK+G A+++ M G KP+ TY +L++G G E
Sbjct: 299 GVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEM 358
Query: 187 MELLRVMENNGMKADVLIYTIII 255
LL +M NG+ + +++I+I
Sbjct: 359 HGLLDLMVRNGIHPNHYVFSILI 381
>ref|NP_197167.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171647|sp|Q9FMD3.1|PP389_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At5g16640, mitochondrial; Flags: Precursor
gi|10176973|dbj|BAB10191.1| unnamed protein product
[Arabidopsis thaliana] gi|110737318|dbj|BAF00605.1|
hypothetical protein [Arabidopsis thaliana]
gi|332004938|gb|AED92321.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 504
Score = 86.3 bits (212), Expect = 2e-15
Identities = 39/87 (44%), Positives = 61/87 (70%)
Frame = +1
Query: 4 KGFKPNTITYSTLIDGFCKSGEVLVAKELLKDMIACGEKPDQITYSSLMRGLFRNGRSSE 183
+G NT+TY+ LI G+C++G++ VA+E+ + M+ CG P+ ITY+ L+ GL NG+ +
Sbjct: 355 RGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEK 414
Query: 184 AMELLRVMENNGMKADVLIYTIIIDGM 264
A+ +L M+ NGM AD++ Y III GM
Sbjct: 415 ALVILADMQKNGMDADIVTYNIIIRGM 441
Score = 69.3 bits (168), Expect = 3e-10
Identities = 35/84 (41%), Positives = 51/84 (60%)
Frame = +1
Query: 7 GFKPNTITYSTLIDGFCKSGEVLVAKELLKDMIACGEKPDQITYSSLMRGLFRNGRSSEA 186
G+KPN + Y+T+IDG CKS +V A +LL M G PD +TY+SL+ GL +GR S+A
Sbjct: 181 GYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDA 240
Query: 187 MELLRVMENNGMKADVLIYTIIID 258
++ M + DV + +ID
Sbjct: 241 TRMVSCMTKREIYPDVFTFNALID 264
Score = 63.9 bits (154), Expect = 1e-08
Identities = 27/86 (31%), Positives = 53/86 (61%)
Frame = +1
Query: 7 GFKPNTITYSTLIDGFCKSGEVLVAKELLKDMIACGEKPDQITYSSLMRGLFRNGRSSEA 186
G +P+ +T+ +L++GFC+ V A + M+ G KP+ + Y++++ GL ++ + A
Sbjct: 146 GHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNA 205
Query: 187 MELLRVMENNGMKADVLIYTIIIDGM 264
++LL ME +G+ DV+ Y +I G+
Sbjct: 206 LDLLNRMEKDGIGPDVVTYNSLISGL 231
Score = 58.9 bits (141), Expect = 4e-07
Identities = 32/82 (39%), Positives = 46/82 (56%)
Frame = +1
Query: 16 PNTITYSTLIDGFCKSGEVLVAKELLKDMIACGEKPDQITYSSLMRGLFRNGRSSEAMEL 195
P+ T++ LID K G V A+E ++MI PD +TYS L+ GL R EA E+
Sbjct: 254 PDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEM 313
Query: 196 LRVMENNGMKADVLIYTIIIDG 261
M + G DV+ Y+I+I+G
Sbjct: 314 FGFMVSKGCFPDVVTYSILING 335
Score = 57.0 bits (136), Expect = 2e-06
Identities = 27/86 (31%), Positives = 49/86 (56%)
Frame = +1
Query: 7 GFKPNTITYSTLIDGFCKSGEVLVAKELLKDMIACGEKPDQITYSSLMRGLFRNGRSSEA 186
G PN ITY+ L+ G C +G++ A +L DM G D +TY+ ++RG+ + G ++A
Sbjct: 391 GVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADA 450
Query: 187 MELLRVMENNGMKADVLIYTIIIDGM 264
++ + G+ D+ YT ++ G+
Sbjct: 451 WDIYCSLNCQGLMPDIWTYTTMMLGL 476
Score = 56.6 bits (135), Expect = 2e-06
Identities = 29/86 (33%), Positives = 46/86 (53%)
Frame = +1
Query: 7 GFKPNTITYSTLIDGFCKSGEVLVAKELLKDMIACGEKPDQITYSSLMRGLFRNGRSSEA 186
G N T + L++ FC+ ++ +A L MI G +P +T+ SL+ G R R +A
Sbjct: 111 GIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDA 170
Query: 187 MELLRVMENNGMKADVLIYTIIIDGM 264
+ + M G K +V+IY IIDG+
Sbjct: 171 LYMFDQMVGMGYKPNVVIYNTIIDGL 196
Score = 54.7 bits (130), Expect = 8e-06
Identities = 28/86 (32%), Positives = 46/86 (53%)
Frame = +1
Query: 4 KGFKPNTITYSTLIDGFCKSGEVLVAKELLKDMIACGEKPDQITYSSLMRGLFRNGRSSE 183
+ P+ +TYS LI G C + A+E+ M++ G PD +TYS L+ G ++ +
Sbjct: 285 RSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEH 344
Query: 184 AMELLRVMENNGMKADVLIYTIIIDG 261
M+L M G+ + + YTI+I G
Sbjct: 345 GMKLFCEMSQRGVVRNTVTYTILIQG 370
>ref|XP_002892702.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
lyrata] gi|297338544|gb|EFH68961.1| hypothetical protein
ARALYDRAFT_471420 [Arabidopsis lyrata subsp. lyrata]
Length = 667
Score = 86.3 bits (212), Expect = 2e-15
Identities = 37/87 (42%), Positives = 62/87 (71%)
Frame = +1
Query: 4 KGFKPNTITYSTLIDGFCKSGEVLVAKELLKDMIACGEKPDQITYSSLMRGLFRNGRSSE 183
+G NT+TYS L+ GFC+SG++ +A+EL ++M++ G PD +TY L+ GL NG+ +
Sbjct: 374 RGLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEK 433
Query: 184 AMELLRVMENNGMKADVLIYTIIIDGM 264
A+E+ ++ + M D+++YTIII+GM
Sbjct: 434 ALEIFEDLQKSKMNLDIVMYTIIIEGM 460
Score = 73.9 bits (180), Expect = 1e-11
Identities = 34/86 (39%), Positives = 59/86 (68%)
Frame = +1
Query: 7 GFKPNTITYSTLIDGFCKSGEVLVAKELLKDMIACGEKPDQITYSSLMRGLFRNGRSSEA 186
G++P+T T++TLI+G C +V A L+ M+ G +P+ +TY+S++ G+ ++G +S A
Sbjct: 130 GYEPDTTTFNTLINGLCLESKVSEAVVLVARMVENGCQPNVVTYNSIVNGICKSGDTSLA 189
Query: 187 MELLRVMENNGMKADVLIYTIIIDGM 264
++LLR M+ +KADV Y+ IID +
Sbjct: 190 LDLLRKMDERNVKADVFTYSTIIDSL 215
Score = 69.3 bits (168), Expect = 3e-10
Identities = 36/82 (43%), Positives = 49/82 (59%)
Frame = +1
Query: 16 PNTITYSTLIDGFCKSGEVLVAKELLKDMIACGEKPDQITYSSLMRGLFRNGRSSEAMEL 195
PN IT++ LID F K G++ A EL K+MI G P+ ITY+SLM G R SEA +
Sbjct: 273 PNVITFNVLIDVFVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNM 332
Query: 196 LRVMENNGMKADVLIYTIIIDG 261
L +M N D++ +T +I G
Sbjct: 333 LDLMVRNNCSPDIVTFTSLIKG 354
Score = 68.6 bits (166), Expect = 5e-10
Identities = 31/86 (36%), Positives = 52/86 (60%)
Frame = +1
Query: 4 KGFKPNTITYSTLIDGFCKSGEVLVAKELLKDMIACGEKPDQITYSSLMRGLFRNGRSSE 183
KG PNTITY++L+DG+C + A +L M+ PD +T++SL++G + R E
Sbjct: 304 KGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDE 363
Query: 184 AMELLRVMENNGMKADVLIYTIIIDG 261
M+L R + G+ A+ + Y+I++ G
Sbjct: 364 GMKLFRKISKRGLVANTVTYSILVQG 389
Score = 68.2 bits (165), Expect = 7e-10
Identities = 30/86 (34%), Positives = 54/86 (62%)
Frame = +1
Query: 7 GFKPNTITYSTLIDGFCKSGEVLVAKELLKDMIACGEKPDQITYSSLMRGLFRNGRSSEA 186
G +PN +TY+++++G CKSG+ +A +LL+ M K D TYS+++ L R+G A
Sbjct: 165 GCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAA 224
Query: 187 MELLRVMENNGMKADVLIYTIIIDGM 264
+ L + ME G+K+ ++ Y ++ G+
Sbjct: 225 ISLFKEMETKGIKSSLVTYNSLVGGL 250
Score = 64.3 bits (155), Expect = 1e-08
Identities = 31/85 (36%), Positives = 50/85 (58%)
Frame = +1
Query: 4 KGFKPNTITYSTLIDGFCKSGEVLVAKELLKDMIACGEKPDQITYSSLMRGLFRNGRSSE 183
KG KPN +TY+ +I G CK G + A LL+ M G +P+ TY++L+R R+G +
Sbjct: 479 KGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNEPNDCTYNTLIRAHLRDGDLTA 538
Query: 184 AMELLRVMENNGMKADVLIYTIIID 258
+ +L+ M++ G AD ++ID
Sbjct: 539 SAKLIEEMKSCGFSADASSIKMVID 563
Score = 58.5 bits (140), Expect = 5e-07
Identities = 28/85 (32%), Positives = 51/85 (60%)
Frame = +1
Query: 4 KGFKPNTITYSTLIDGFCKSGEVLVAKELLKDMIACGEKPDQITYSSLMRGLFRNGRSSE 183
+ K + TYST+ID C+ G + A L K+M G K +TY+SL+ GL + G+ ++
Sbjct: 199 RNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWND 258
Query: 184 AMELLRVMENNGMKADVLIYTIIID 258
++LL+ M + + +V+ + ++ID
Sbjct: 259 GVQLLKDMTSRKIIPNVITFNVLID 283
Score = 58.2 bits (139), Expect = 7e-07
Identities = 29/86 (33%), Positives = 50/86 (58%)
Frame = +1
Query: 4 KGFKPNTITYSTLIDGFCKSGEVLVAKELLKDMIACGEKPDQITYSSLMRGLFRNGRSSE 183
KG K + +TY++L+ G CK+G+ +LLKDM + P+ IT++ L+ + G+ E
Sbjct: 234 KGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQE 293
Query: 184 AMELLRVMENNGMKADVLIYTIIIDG 261
A EL + M G+ + + Y ++DG
Sbjct: 294 ANELYKEMITKGISPNTITYNSLMDG 319
Score = 56.2 bits (134), Expect = 3e-06
Identities = 25/86 (29%), Positives = 49/86 (56%)
Frame = +1
Query: 7 GFKPNTITYSTLIDGFCKSGEVLVAKELLKDMIACGEKPDQITYSSLMRGLFRNGRSSEA 186
G P+ +TY L+DG C +G++ A E+ +D+ D + Y+ ++ G+ + G+ +A
Sbjct: 410 GVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKGGKVEDA 469
Query: 187 MELLRVMENNGMKADVLIYTIIIDGM 264
L + G+K +V+ YT++I G+
Sbjct: 470 WNLFCSLPCKGVKPNVMTYTVMISGL 495